# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_48	LOCUS_00480	sequence01:41244..41456(-)	frameshift		41530	WP_011836809.1	GNAT family N-acetyltransferase	100.0	47.6	84.3
MGA_49	LOCUS_00490	sequence01:41516..41680(-)	frameshift		41530	WP_011836809.1	GNAT family N-acetyltransferase	92.6	34.0	80.0
MGA_51	LOCUS_00510	sequence01:43088..43573(-)	internal_stop_codon	43628..43630(-)		WP_011836806.1	ABC transporter ATP-binding protein	99.4	27.5	81.9
MGA_52	LOCUS_00520	sequence01:43628..44827(-)	internal_stop_codon	43628..43630(-)		WP_011836806.1	ABC transporter ATP-binding protein	100.0	68.7	74.9
MGA_69	LOCUS_00690	sequence01:65697..65933(-)	internal_stop_codon	65697..65699(-)		WP_012027506.1	GNAT family N-acetyltransferase	100.0	57.8	56.4
MGA_77	LOCUS_00770	sequence01:71822..71992(+)	partial			WP_002895160.1	DUF3042 family protein	71.4	71.4	90.0
MGA_84	LOCUS_00840	sequence01:78635..79252(-)	internal_stop_codon	79271..79273(-)		WP_000349559.1	DUF4037 domain-containing protein	99.5	76.0	53.9
MGA_85	LOCUS_00850	sequence01:79271..79417(-)	internal_stop_codon	79271..79273(-)		WP_000349559.1	DUF4037 domain-containing protein	100.0	18.0	64.6
MGA_97	LOCUS_00970	sequence01:92898..93107(-)	internal_stop_codon	93132..93134(-)		WP_002262212.1	M1 family metallopeptidase	79.7	6.5	81.8
MGA_101	LOCUS_01010	sequence01:98456..98740(-)	frameshift,internal_stop_codon	98863..98865(-),98455..98457(-)	98871	WP_011836757.1	glycosyltransferase family 2 protein	100.0	30.5	83.0
MGA_102	LOCUS_01020	sequence01:98848..99009(-)	frameshift,internal_stop_codon	98863..98865(-)	98871	WP_012775134.1	glycosyltransferase family 2 protein	81.1	14.0	62.8
MGA_120	LOCUS_01200	sequence01:115913..117055(-)	partial			WP_001048043.1	AAA family ATPase	70.5	36.2	27.3
MGA_182	LOCUS_01820	sequence01:184907..185557(-)	partial			WP_002287463.1	glycoside hydrolase family 73 protein	58.3	29.9	58.7
MGA_184	LOCUS_01840	sequence01:187161..188162(-)	partial			WP_013097856.1	glycosyltransferase family 2 protein	68.2	69.1	36.0
MGA_204	LOCUS_02040	sequence01:203994..204428(+)	partial			WP_003722868.1	YdcF family protein	93.8	39.0	46.7
MGA_290	LOCUS_02890	sequence02:1..791(+)	partial			WP_011836944.1	MATE family efflux transporter	83.6	49.0	77.2
MGA_322	LOCUS_03210	sequence02:32120..32581(-)	frameshift		32624	WP_012546471.1	acyl-CoA dehydrogenase family protein	100.0	40.7	24.8
MGA_410	LOCUS_04090	sequence02:122042..122551(-)	frameshift		122684	WP_000601065.1	hypothetical protein	92.3	57.1	59.0
MGA_411	LOCUS_04100	sequence02:122673..122954(-)	frameshift		122684	WP_000601065.1	hypothetical protein	72.0	24.5	53.7
MGA_420	LOCUS_04190	sequence02:129943..130245(-)	partial			WP_002680353.1	hypothetical protein	99.0	67.3	67.7
MGA_430	LOCUS_04290	sequence02:137688..139256(-)	partial			WP_011202294.1	site-specific DNA-methyltransferase	78.4	73.3	40.3
MGA_433	LOCUS_04320	sequence02:141922..142872(-)	internal_stop_codon	142918..142920(-)		WP_011836894.1	fructose-1,6-bisphosphatase	100.0	49.7	73.1
MGA_434	LOCUS_04330	sequence02:142918..143841(-)	internal_stop_codon	142918..142920(-)		WP_011836894.1	fructose-1,6-bisphosphatase	100.0	47.6	68.4
MGA_438	LOCUS_04370	sequence02:148331..148759(+)	partial			WP_011836891.1	hypothetical protein	70.4	72.5	41.6
MGA_486	LOCUS_04850	sequence02:191650..192084(-)	partial			WP_000850938.1	DpnD/PcfM family protein	56.9	60.1	47.8
MGA_488	LOCUS_04870	sequence02:192877..193071(-)	partial			WP_011837306.1	DNA adenine methylase	73.4	16.4	80.9
MGA_489	LOCUS_04880	sequence02:193214..193354(+)	partial			WP_002897213.1	SPJ_0845 family protein	67.4	68.9	90.3
MGA_508	LOCUS_05070	sequence02:214894..215667(-)	internal_stop_codon	215698..215700(-)		WP_011836393.1	GBS Bsp-like repeat-containing protein	99.6	26.7	68.4
MGA_509	LOCUS_05080	sequence02:215698..218340(-)	frameshift,internal_stop_codon	215698..215700(-)	215746	WP_002900650.1	GBS Bsp-like repeat-containing protein	100.0	66.5	50.8
MGA_513	LOCUS_05120	sequence02:221692..221919(-)	frameshift		221941	WP_011922077.1	RNA polymerase sigma factor	93.3	41.9	42.9
MGA_514	LOCUS_05130	sequence02:221909..222163(-)	frameshift		221941	WP_011922077.1	RNA polymerase sigma factor	90.5	45.5	53.9
MGA_539	LOCUS_05380	sequence02:248096..248818(-)	frameshift,internal_stop_codon	248095..248097(-)	248817	WP_002904591.1	zinc-binding alcohol dehydrogenase family protein	99.6	74.7	72.8
MGA_542	LOCUS_05410	sequence02:251170..251556(-)	partial			WP_011015980.1	MarR family transcriptional regulator	93.0	74.4	48.7
MGA_556	LOCUS_05550	sequence02:265205..265432(-)	frameshift		265454	WP_002900787.1	helix-turn-helix transcriptional regulator	92.0	63.9	79.7
MGA_568	LOCUS_05670	sequence02:280109..280780(-)	internal_stop_codon	280109..280111(-)		WP_011922588.1	PfkB family carbohydrate kinase	100.0	71.9	50.0
MGA_649	LOCUS_06460	sequence03:60561..60851(+)	internal_stop_codon	60849..60851(+)		WP_044682503.1	ATPase AAA	100.0	12.4	43.3
MGA_652	LOCUS_06490	sequence03:63519..65504(+)	partial			WP_000656702.1	phage tail tip lysozyme	90.3	62.5	38.7
MGA_703	LOCUS_07000	sequence03:112528..112851(+)	frameshift		112821	WP_032908745.1	GNAT family N-acetyltransferase	94.4	65.6	60.4
MGA_723	LOCUS_07190	sequence04:7505..9244(-)	partial			WP_011204831.1	RNA-directed DNA polymerase	23.3	20.7	36.4
MGA_782	LOCUS_07780	sequence04:72682..77154(+)	partial			WP_207215633.1	MucBP domain-containing protein	48.7	60.2	32.5
MGA_792	LOCUS_07880	sequence04:88736..90970(+)	partial			WP_011837499.1	LPXTG-anchored zinc carboxypeptidase	96.0	66.2	73.0
MGA_795	LOCUS_07910	sequence04:97035..97379(-)	partial			WP_011836389.1	CPBP family intramembrane metalloprotease	99.1	55.4	53.1
MGA_803	LOCUS_07990	sequence04:104422..104772(-)	internal_stop_codon	104422..104424(-),104383..104385(-)		WP_002916463.1	NYN domain-containing protein	100.0	67.1	86.2
MGA_818	LOCUS_08140	sequence04:117980..118462(-)	internal_stop_codon	118577..118579(-)		WP_012028519.1	pseudouridine synthase	99.4	65.7	74.8
MGA_822	LOCUS_08160	sequence05:264..698(-)	frameshift,internal_stop_codon	758..760(-),857..859(-)	871	WP_126466402.1	site-specific integrase	97.2	36.5	71.4
MGA_876	LOCUS_08700	sequence05:59005..61146(+)	partial			WP_002352220.1	SH3 domain-containing protein	62.1	71.5	43.0
MGA_886	LOCUS_08800	sequence05:72443..72688(-)	frameshift		72762	WP_000931877.1	pyridoxamine 5'-phosphate oxidase family protein	100.0	65.3	63.0
MGA_888	LOCUS_08820	sequence05:73513..73929(-)	internal_stop_codon	73939..73941(-),73513..73515(-)		WP_002263641.1	GrpB family protein	100.0	68.7	71.7
MGA_898	LOCUS_08920	sequence05:84534..84764(-)	partial			WP_002934707.1	hypothetical protein	98.7	47.8	68.0
MGA_912	LOCUS_09060	sequence05:96671..97147(-)	frameshift,internal_stop_codon	97044..97046(-),97173..97175(-)	96688,97385	WP_120719025.1	IS3 family transposase	69.0	24.3	81.7
MGA_913	LOCUS_09070	sequence05:97174..97311(-)	frameshift,internal_stop_codon	97044..97046(-),97173..97175(-),97449..97451(-)	97385	WP_120719025.1	IS3 family transposase	88.9	8.9	75.0
MGA_914	LOCUS_09080	sequence05:97287..97442(-)	internal_stop_codon	97449..97451(-)		WP_081026662.1	IS3 family transposase	88.2	19.2	71.1
MGA_915	LOCUS_09090	sequence05:97449..97823(-)	internal_stop_codon	97449..97451(-)		WP_081026662.1	IS3 family transposase	87.1	46.2	82.4
MGA_920	LOCUS_09140	sequence06:2515..3114(-)	partial			WP_000153219.1	Cof-type HAD-IIB family hydrolase	84.9	63.2	63.5
MGA_923	LOCUS_09170	sequence06:6909..7715(-)	frameshift		7795	WP_000145178.1	leucine--tRNA ligase	66.4	21.1	94.4
MGA_995	LOCUS_09880	sequence07:365..718(-)	frameshift,internal_stop_codon	365..367(-)	355	WP_055164393.1	IS30 family transposase	95.7	35.0	42.4
MGA_1024	LOCUS_10170	sequence07:29726..33106(+)	partial			WP_002864485.1	type II CRISPR RNA-guided endonuclease Cas9	65.8	72.4	28.6
MGA_1030	LOCUS_10230	sequence07:39456..39632(+)	partial			WP_000048054.1	30S ribosomal protein S21	74.1	74.1	97.7
MGA_1057	LOCUS_10500	sequence07:67472..68164(+)	partial			WP_011836944.1	MATE family efflux transporter	98.7	50.8	67.8
MGA_1077	LOCUS_10700	sequence08:19127..19864(-)	frameshift		19866	WP_001286126.1	hypothetical protein	100.0	75.9	60.8
MGA_1078	LOCUS_10710	sequence08:19819..20085(-)	frameshift		19866	WP_001286126.1	hypothetical protein	77.3	21.2	66.2
MGA_1085	LOCUS_10780	sequence08:25357..25542(-)	internal_stop_codon	25546..25548(-)		WP_001021308.1	AAA family ATPase	88.5	28.7	57.4
MGA_1086	LOCUS_10790	sequence08:25546..25938(-)	internal_stop_codon	25546..25548(-)		WP_002989022.1	AAA family ATPase	99.2	69.0	64.3
MGA_1091	LOCUS_10840	sequence08:29665..29991(-)	frameshift,internal_stop_codon	29997..29999(-)	30131	WP_000355907.1	cytidine deaminase	81.5	61.1	75.0
MGA_1106	LOCUS_10990	sequence08:45279..45593(-)	partial			WP_002893503.1	DNA-directed RNA polymerase subunit omega	64.4	64.4	94.0
MGA_1120	LOCUS_11120	sequence09:36..401(-)	partial			WP_003561810.1	IS30-like element ISLpl1 family transposase	95.0	35.0	43.5
MGA_1122	LOCUS_11140	sequence09:1220..1717(-)	partial			WP_011837482.1	CTP synthase	93.9	28.9	89.0
MGA_1186	LOCUS_11770	sequence10:8430..8867(-)	partial			WP_000410824.1	hypothetical protein	51.7	43.8	34.6
MGA_1196	LOCUS_11870	sequence10:16064..19537(-)	partial			WP_011837563.1	Cna B-type domain-containing protein	65.8	49.1	39.4
MGA_1245	LOCUS_12360	sequence11:15415..15666(-)	internal_stop_codon	15709..15711(-)		WP_012775165.1	DUF1304 domain-containing protein	100.0	68.9	67.5
MGA_1263	LOCUS_12540	sequence11:32920..33534(+)	frameshift		33531	WP_011836318.1	MurR/RpiR family transcriptional regulator	98.0	70.7	75.5
MGA_1268	LOCUS_12590	sequence11:36820..37080(-)	partial			WP_001192120.1	carbohydrate ABC transporter permease	100.0	30.8	97.7
MGA_1269	LOCUS_12600	sequence11:37077..37412(-)	partial			WP_000672105.1	ABC transporter substrate-binding protein	99.1	24.9	74.5
MGA_1277	LOCUS_12680	sequence11:46420..46914(-)	frameshift		46997	WP_011101624.1	IS1182 family transposase	90.2	29.1	33.1
MGA_1278	LOCUS_12690	sequence11:46986..47711(-)	frameshift		47809,46996	WP_095092556.1	IS1182 family transposase	100.0	43.0	44.6
MGA_1365	LOCUS_13530	sequence13:31149..31367(-)	frameshift,internal_stop_codon	31413..31415(-)	31464,31471	WP_011101571.1	restriction endonuclease	93.1	21.5	47.8
MGA_1366	LOCUS_13540	sequence13:31433..32062(-)	frameshift,internal_stop_codon	31413..31415(-)	31464,31471	WP_011101571.1	restriction endonuclease	85.6	63.7	30.7
MGA_1379	LOCUS_13660	sequence14:472..1155(-)	partial			WP_011836679.1	DUF805 domain-containing protein	67.4	41.2	52.9
MGA_1399	LOCUS_13860	sequence14:19437..19781(-)	frameshift,internal_stop_codon	19935..19937(-),19791..19793(-),19977..19979(-)	20019	WP_002262027.1	flavocytochrome c	100.0	14.2	70.2
MGA_1402	LOCUS_13880	sequence14:21104..21469(+)	partial			WP_002905011.1	alanine dehydrogenase	100.0	32.7	87.6
MGA_1406	LOCUS_13920	sequence14:24563..25036(-)	partial			WP_010964318.1	ASCH domain-containing protein	72.6	71.3	43.9
MGA_1408	LOCUS_13940	sequence14:25664..25828(-)	frameshift		25935	WP_003723189.1	inorganic diphosphatase	100.0	43.9	61.1
MGA_1413	LOCUS_13990	sequence14:29964..30359(-)	frameshift,internal_stop_codon	30479..30481(-)	30391	WP_003642292.1	NAD(P)H-binding protein	98.5	59.2	55.0
MGA_1414	LOCUS_14000	sequence14:30614..31054(-)	internal_stop_codon	31079..31081(-)		WP_011202637.1	carboxymuconolactone decarboxylase family protein	95.2	50.0	58.3
MGA_1416	LOCUS_14020	sequence14:31917..32798(-)	partial			WP_003722212.1	LysR family transcriptional regulator	66.2	65.8	31.4
MGA_1418	LOCUS_14040	sequence14:34389..>34960(-)	partial			WP_003138385.1	IS256-like element IS905 family transposase	100.0	48.3	95.8
MGA_1501	LOCUS_14830	sequence17:10369..10617(-)	internal_stop_codon	10813..10815(-)		WP_010774239.1	TraX family protein	84.1	28.7	44.0
MGA_1502	LOCUS_14840	sequence17:10813..11172(-)	internal_stop_codon	10813..10815(-)		WP_011987086.1	TraX family protein	84.9	38.7	39.8
MGA_1522	LOCUS_15030	sequence18:552..2180(-)	partial			WP_011837728.1	YfhO family protein	99.6	62.7	61.2
MGA_1526	LOCUS_15070	sequence18:5534..6223(+)	partial			WP_011141042.1	triose-phosphate isomerase	65.9	63.8	30.0
MGA_1553	LOCUS_15320	sequence19:225..833(+)	partial			WP_002310801.1	replication initiation factor domain-containing protein	100.0	49.3	85.1
MGA_1562	LOCUS_15410	sequence19:6705..7199(+)	frameshift		7217,7187	WP_000357668.1	hypothetical protein	96.3	23.3	44.3
MGA_1563	LOCUS_15420	sequence19:7171..8631(+)	frameshift		7217,7187	WP_000357668.1	hypothetical protein	98.4	74.6	32.5
MGA_1568	LOCUS_15470	sequence19:11838..12215(+)	frameshift,internal_stop_codon	12213..12215(+)	12488	WP_120770310.1	ISL3 family transposase	100.0	29.9	88.0
MGA_1569	LOCUS_15480	sequence19:12333..12500(+)	internal_stop_codon	12693..12695(+),12498..12500(+),12522..12524(+),12213..12215(+)		WP_120770310.1	ISL3 family transposase	98.2	12.9	90.7
MGA_1570	LOCUS_15490	sequence19:12723..13145(+)	frameshift,internal_stop_codon	12693..12695(+),12498..12500(+),12522..12524(+)	12864,12833	WP_120770310.1	ISL3 family transposase	100.0	33.5	84.3
MGA_1580	LOCUS_15590	sequence19:25449..25721(-)	frameshift,internal_stop_codon	25782..25784(-)	25310,25454	WP_011674147.1	IS30 family transposase	93.3	26.2	47.1
MGA_1581	LOCUS_15600	sequence19:25782..26111(-)	internal_stop_codon	25782..25784(-)		WP_011674809.1	IS30 family transposase	97.2	40.1	32.1
MGA_1594	LOCUS_15730	sequence20:12940..13209(+)	partial			WP_002900516.1	UDP-glucose 4-epimerase GalE	77.5	20.7	85.5
MGA_1605	LOCUS_15840	sequence20:23841..24344(-)	partial			WP_003855552.1	LysR family transcriptional regulator	77.2	44.2	33.8
MGA_1672	LOCUS_16450	sequence24:8586..9086(-)	partial			WP_001197951.1	YehR family lipoprotein	74.1	69.3	34.7
MGA_1696	LOCUS_16680	sequence25:12914..13909(-)	partial			WP_002262569.1	DUF1700 domain-containing protein	23.0	39.9	59.5
MGA_1717	LOCUS_16890	sequence26:14976..15272(-)	internal_stop_codon	14976..14978(-)		WP_011837475.1	GNAT family N-acetyltransferase	89.8	57.9	67.0
MGA_1736	LOCUS_17050	sequence28:1100..1801(+)	partial			WP_001232459.1	DhaKLM operon coactivator DhaQ	94.0	66.8	69.4
MGA_1746	LOCUS_17150	sequence28:11153..11764(-)	partial			WP_011459264.1	sce7726 family protein	98.5	70.4	52.9
MGA_1782	LOCUS_17450	sequence32:2633..2983(-)	partial			WP_002902079.1	hypothetical protein	100.0	71.6	44.8
MGA_1788	LOCUS_17500	sequence33:2297..3154(+)	frameshift,internal_stop_codon	3342..3344(+)	3133	WP_002896547.1	ABC transporter ATP-binding protein	97.9	53.2	88.9
MGA_1789	LOCUS_17510	sequence33:3147..3344(+)	frameshift,internal_stop_codon	3342..3344(+)	3133	WP_001033165.1	ABC transporter ATP-binding protein	100.0	12.4	75.4
MGA_1790	LOCUS_17520	sequence33:3387..3872(+)	frameshift,internal_stop_codon	3342..3344(+)	3133	WP_001033165.1	ABC transporter ATP-binding protein	100.0	30.7	78.3
MGA_1804	LOCUS_17620	sequence37:679..1119(-)	frameshift,internal_stop_codon	667..669(-)	687	WP_002263312.1	aminoacyltransferase	98.6	35.1	63.2
MGA_1805	LOCUS_17630	sequence37:1421..1807(-)	internal_stop_codon	1886..1888(-)		WP_011837354.1	TrkH family potassium uptake protein	100.0	26.7	71.1
MGA_1806	LOCUS_17640	sequence37:1886..2860(-)	internal_stop_codon	1886..1888(-)		WP_011837354.1	TrkH family potassium uptake protein	99.1	67.0	78.2
MGA_1815	LOCUS_17670	sequence43:245..517(-)	frameshift,internal_stop_codon	626..628(-)	286	WP_003138385.1	IS256-like element IS905 family transposase	93.3	26.9	70.5
