{
    "type": "genome",
    "identifier": "GCF_014287335.1",
    "organism": "Streptococcus hominis",
    "title": "Streptococcus hominis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "WFCC-MRCEN World Data Centre for Microoganisms(WDCM)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_014287335.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN15806941",
        "wgs_master": "JACOOM000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2763067",
        "species_taxid": "2763067",
        "organism_name": "Streptococcus hominis",
        "infraspecific_name": "strain=NSJ-17",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/08/24",
        "asm_name": "ASM1428733v1",
        "asm_submitter": "WFCC-MRCEN World Data Centre for Microoganisms(WDCM)",
        "gbrs_paired_asm": "GCA_014287335.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/287/335/GCF_014287335.1_ASM1428733v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "1846156",
        "genome_size_ungapped": "1846156",
        "gc_percent": "39.000000",
        "replicon_count": "0",
        "scaffold_count": "44",
        "contig_count": "44",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_014287335.1-RS_2024_07_15",
        "annotation_date": "2024-07-15",
        "total_gene_count": "1874",
        "protein_coding_gene_count": "1713",
        "non_coding_gene_count": "56",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-08-24",
    "dateModified": "2020-08-24",
    "datePublished": "2020-08-24",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Streptococcus hominis"
        ],
        "sample_taxid": [
            "2763067"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Beijing"
        ],
        "sample_host_location_id": [],
        "data_size": "0.524 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "1846156",
        "Number of Sequences": "44",
        "Longest Sequences (bp)": "307888",
        "N50 (bp)": "98019",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "38.9",
        "Number of CDSs": "1765",
        "Average Protein Length": "304.3",
        "Coding Ratio (%)": "87.3",
        "Number of rRNAs": "2",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Streptococcus anginosus",
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                "accession": "GCA_000373605.1",
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                "species_taxid": 1328,
                "relation_to_type": "type",
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            {
                "organism_name": "Streptococcus anginosus",
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                "validated": true,
                "ani": 94.9839,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus anginosus subsp. anginosus",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus anginosus",
                "strain": "strain=NCTC10713",
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                "species_taxid": 1328,
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                "ani": 94.8785,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus anginosus",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus anginosus subsp. whileyi",
                "strain": "strain=CCUG 39159",
                "accession": "GCA_000257765.1",
                "taxid": 1272910,
                "species_taxid": 1328,
                "relation_to_type": "type",
                "validated": true,
                "ani": 94.0301,
                "matched_fragments": 511,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus constellatus subsp. constellatus",
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                "accession": "GCA_023167545.1",
                "taxid": 184246,
                "species_taxid": 76860,
                "relation_to_type": "type",
                "validated": true,
                "ani": 88.3338,
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                "total_fragments": 594,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus toyakuensis",
                "strain": "strain=TP1632",
                "accession": "GCA_024346585.1",
                "taxid": 2819619,
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                "relation_to_type": "type",
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                "ani": 78.8599,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus downii",
                "strain": "strain=CECT 9732",
                "accession": "GCA_004353325.1",
                "taxid": 1968889,
                "species_taxid": 1968889,
                "relation_to_type": "type",
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                "ani": 78.717,
                "matched_fragments": 146,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus parasuis",
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                "accession": "GCA_021654455.1",
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                "relation_to_type": "suspected-type",
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                "ani": 78.5726,
                "matched_fragments": 92,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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                "accession": "GCF_001697145.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.71",
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                "num_clustered_genomes": 41,
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            },
            {
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                "num_clustered_genomes": 79,
                "status": "-"
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            {
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            },
            {
                "accession": "GCF_000413475.1",
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        ]
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    "_bac2feature": {
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    "_genome_taxon": [
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        "hominis"
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}