{ "tc_result": [ { "organism_name": "Dorea formicigenerans", "strain": "strain=ATCC 27755", "accession": "GCA_025150245.1", "taxid": 39486, "species_taxid": 39486, "relation_to_type": "suspected-type", "validated": true, "ani": 84.0284, "matched_fragments": 270, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Coprococcus comes", "strain": "strain=ATCC 27758", "accession": "GCA_025149785.1", "taxid": 410072, "species_taxid": 410072, "relation_to_type": "type", "validated": true, "ani": 83.5218, "matched_fragments": 243, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Coprococcus phoceensis", "strain": "strain=Marseille-P3062", "accession": "GCA_900104635.1", "taxid": 1870993, "species_taxid": 1870993, "relation_to_type": "type", "validated": true, "ani": 83.4775, "matched_fragments": 211, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Ruminococcus] gnavus", "strain": "strain=JCM6515", "accession": "GCA_008121495.1", "taxid": 33038, "species_taxid": 33038, "relation_to_type": "suspected-type", "validated": true, "ani": 81.5482, "matched_fragments": 217, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia hansenii", "strain": "strain=DSM 20583", "accession": "GCA_025147655.1", "taxid": 1322, "species_taxid": 1322, "relation_to_type": "type", "validated": true, "ani": 81.3605, "matched_fragments": 95, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Ruminococcus] gnavus", "strain": "strain=ATCC 29149", "accession": "GCA_009831375.1", "taxid": 33038, "species_taxid": 33038, "relation_to_type": "suspected-type", "validated": true, "ani": 81.3146, "matched_fragments": 213, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Ruminococcus] gnavus", "strain": "strain=ATCC 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"taxid": 2316025, "species_taxid": 2316025, "relation_to_type": "type", "validated": true, "ani": 80.7722, "matched_fragments": 158, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Ruminococcus] gnavus", "strain": "strain=ATCC 29149", "accession": "GCA_025152275.1", "taxid": 33038, "species_taxid": 33038, "relation_to_type": "type", "validated": true, "ani": 80.7672, "matched_fragments": 210, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia hansenii", "strain": "strain=DSM 20583", "accession": "GCA_000156675.1", "taxid": 1322, "species_taxid": 1322, "relation_to_type": "type", "validated": true, "ani": 80.7417, "matched_fragments": 91, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luxibacter massiliensis", "strain": "strain=Marseille-P5551", "accession": "GCA_900604355.1", "taxid": 2219695, "species_taxid": 2219695, "relation_to_type": "type", "validated": true, "ani": 80.602, "matched_fragments": 141, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Ruminococcus] lactaris", "strain": "strain=ATCC 29176", "accession": "GCA_000155205.1", "taxid": 46228, "species_taxid": 46228, "relation_to_type": "type", "validated": true, "ani": 80.0332, "matched_fragments": 197, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Ruminococcus] lactaris", "strain": "strain=ATCC 29176", "accession": "GCA_025152405.1", "taxid": 46228, "species_taxid": 46228, "relation_to_type": "type", "validated": true, "ani": 79.9622, "matched_fragments": 207, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Faecalimonas umbilicata", "strain": "strain=EGH7", "accession": "GCA_003402615.1", "taxid": 1912855, "species_taxid": 1912855, "relation_to_type": "type", "validated": true, "ani": 79.3742, "matched_fragments": 131, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hespellia stercorisuis", "strain": "strain=DSM 15480", "accession": "GCA_900142165.1", "taxid": 180311, "species_taxid": 180311, "relation_to_type": "type", "validated": true, "ani": 79.3461, "matched_fragments": 126, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Ruminococcus] torques", "strain": "strain=ATCC 27756", "accession": "GCA_000153925.1", "taxid": 33039, "species_taxid": 33039, "relation_to_type": "type", "validated": true, "ani": 79.3396, "matched_fragments": 151, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Schaedlerella arabinosiphila", "strain": "strain=DSM 106076", "accession": "GCA_003885045.1", "taxid": 2044587, "species_taxid": 2044587, "relation_to_type": "type", "validated": true, "ani": 78.5781, "matched_fragments": 99, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Faecalimonas umbilicata", "strain": "strain=DSM 103426", "accession": "GCA_004346095.1", "taxid": 1912855, "species_taxid": 1912855, "relation_to_type": "type", "validated": true, "ani": 78.5275, "matched_fragments": 123, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerostipes faecalis", "strain": "strain=AGMB03513", "accession": "GCA_018982945.1", "taxid": 2738446, "species_taxid": 2738446, "relation_to_type": "type", "validated": true, "ani": 78.3566, "matched_fragments": 78, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mediterraneibacter massiliensis", "strain": "strain=Marseille-P2086", "accession": "GCA_001487105.1", "taxid": 1720300, "species_taxid": 1720300, "relation_to_type": "type", "validated": true, "ani": 78.1308, "matched_fragments": 133, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mediterraneibacter catenae", "strain": "strain=SW178", "accession": "GCA_008691045.1", "taxid": 2594882, "species_taxid": 2594882, "relation_to_type": "type", "validated": true, "ani": 77.8925, "matched_fragments": 118, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Muricomes intestini", "strain": "strain=DSM 29489", "accession": "GCA_004346165.1", "taxid": 1796634, "species_taxid": 1796634, "relation_to_type": "type", "validated": true, "ani": 77.7929, "matched_fragments": 115, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frisingicoccus caecimuris", "strain": "strain=DSM 28559", "accession": "GCA_024622585.1", "taxid": 1796636, "species_taxid": 1796636, "relation_to_type": "type", "validated": true, "ani": 77.5622, "matched_fragments": 67, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frisingicoccus caecimuris", "strain": "strain=DSM 28559", "accession": "GCA_004340975.1", "taxid": 1796636, "species_taxid": 1796636, "relation_to_type": "type", "validated": true, "ani": 77.547, "matched_fragments": 67, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lachnotalea glycerini", "strain": "strain=DSM 28816", "accession": "GCA_003201285.1", "taxid": 1763509, "species_taxid": 1763509, "relation_to_type": "type", "validated": true, "ani": 76.601, "matched_fragments": 52, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_003480425.1", "gtdb_species": "s__Schaedlerella sp900066545", "ani": 98.0776, "matched_fragments": 868, "total_fragments": 1151, "gtdb_taxonomy": 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"d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.26", "min_intra_species_ani": "99.26", "mean_intra_species_af": "0.76", "min_intra_species_af": "0.76", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_019116185.1", "gtdb_species": "s__Mediterraneibacter stercorigallinarum", "ani": 76.6356, "matched_fragments": 58, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Mediterraneibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.63", "min_intra_species_ani": "98.63", "mean_intra_species_af": "0.78", "min_intra_species_af": "0.78", "num_clustered_genomes": 2, "status": "-" } ] }