# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_26	LOCUS_00140	sequence1:38359..39207(+)	partial			WP_000361602.1	polysaccharide deacetylase family protein	66.3	40.4	48.7
MGA_38	LOCUS_00260	sequence1:47358..51935(-)	frameshift		52210,52213	WP_220738881.1	DUF1542 domain-containing protein	94.3	62.0	33.6
MGA_39	LOCUS_00270	sequence1:52175..53566(-)	frameshift		52180,52183	WP_000527121.1	YSIRK signal domain/LPXTG anchor domain surface protein	30.9	5.5	34.7
MGA_54	LOCUS_00420	sequence1:77006..79414(-)	partial			WP_001239465.1	SpaA isopeptide-forming pilin-related protein	42.4	37.4	26.2
MGA_59	LOCUS_00470	sequence1:86602..89541(-)	partial			WP_010706701.1	autolysin	62.1	77.5	45.8
MGA_70	LOCUS_00580	sequence1:95446..95835(+)	partial			WP_000402394.1	helix-turn-helix transcriptional regulator	45.7	29.9	50.8
MGA_84	LOCUS_00720	sequence1:106569..107312(+)	partial			WP_002262616.1	helix-turn-helix transcriptional regulator	30.0	54.8	44.6
MGA_130	LOCUS_01180	sequence1:155758..155931(-)	frameshift		155974	WP_002356013.1	chromosomal replication initiator protein DnaA	100.0	12.8	84.2
MGA_131	LOCUS_01190	sequence1:155960..157102(-)	frameshift		155974	WP_002288360.1	chromosomal replication initiator protein DnaA	99.5	84.5	72.0
MGA_132	LOCUS_01200	sequence1:157573..157707(+)	partial			WP_002356012.1	50S ribosomal protein L34	59.1	59.1	96.2
MGA_141	LOCUS_01290	sequence1:167180..167983(+)	partial			WP_010714140.1	DNA primase family protein	85.8	28.5	40.0
MGA_204	LOCUS_01890	sequence1:220108..222465(+)	partial			WP_013384050.1	ATP-binding protein	62.4	61.6	24.8
MGA_221	LOCUS_02060	sequence1:240488..241108(-)	frameshift,internal_stop_codon	241114..241116(-)	241119	WP_010965176.1	FtsK/SpoIIIE domain-containing protein	91.7	47.2	40.4
MGA_222	LOCUS_02070	sequence1:241105..241782(-)	frameshift		241110	WP_000475574.1	FtsK/SpoIIIE domain-containing protein	76.9	41.6	31.0
MGA_226	LOCUS_02110	sequence1:243932..246088(-)	partial			WP_011109578.1	EF3023 family LPXTG-anchored polysaccharide lyase	38.3	20.3	33.7
MGA_233	LOCUS_02180	sequence1:251573..252190(-)	frameshift		252225	WP_002287016.1	replication initiation factor domain-containing protein	96.1	55.0	58.9
MGA_234	LOCUS_02190	sequence1:252223..252810(-)	frameshift		252225	WP_002287016.1	replication initiation factor domain-containing protein	73.3	39.4	53.8
MGA_239	LOCUS_02240	sequence1:256787..257101(-)	internal_stop_codon	257168..257170(-),257345..257347(-)		WP_011986262.1	lantibiotic protection ABC transporter ATP-binding protein	94.2	41.7	59.2
MGA_240	LOCUS_02250	sequence1:257168..257341(-)	internal_stop_codon	257168..257170(-),257345..257347(-)		WP_003434737.1	lantibiotic protection ABC transporter ATP-binding protein	96.5	24.8	58.6
MGA_242	LOCUS_02270	sequence1:258465..258824(+)	frameshift		258725	WP_011100873.1	type 1 glutamine amidotransferase domain-containing protein	71.4	37.9	67.1
MGA_243	LOCUS_02280	sequence1:258779..259144(+)	frameshift		258725	WP_003573210.1	type 1 glutamine amidotransferase domain-containing protein	98.3	52.7	63.0
MGA_250	LOCUS_02350	sequence1:268439..268879(-)	frameshift		268871	WP_104859673.1	IS256 family transposase	97.9	36.8	86.7
MGA_251	LOCUS_02360	sequence1:268845..269606(-)	frameshift		268871	WP_104859673.1	IS256 family transposase	100.0	65.0	87.7
MGA_253	LOCUS_02380	sequence1:270373..270927(+)	frameshift		270915,270981	WP_141741171.1	IS3 family transposase	98.4	39.7	51.6
MGA_254	LOCUS_02390	sequence1:270937..271317(+)	frameshift,internal_stop_codon	271316..271318(+)	270984,270915	WP_141741171.1	IS3 family transposase	99.2	26.2	52.8
MGA_255	LOCUS_02400	sequence1:271363..271770(+)	internal_stop_codon	271315..271317(+)		WP_141741171.1	IS3 family transposase	96.3	27.5	66.9
MGA_268	LOCUS_02530	sequence1:282950..283576(+)	partial			WP_164921101.1	Crp/Fnr family transcriptional regulator	73.1	65.2	26.8
MGA_272	LOCUS_02570	sequence1:288401..290194(+)	partial			WP_011674628.1	LysM peptidoglycan-binding domain-containing protein	52.1	24.5	37.0
MGA_278	LOCUS_02630	sequence1:295212..295427(+)	frameshift		295373	WP_002286265.1	YoaK family protein	94.4	29.5	55.2
MGA_279	LOCUS_02640	sequence1:295559..295894(+)	frameshift		295373	WP_002286265.1	YoaK family protein	96.4	47.1	52.3
MGA_287	LOCUS_02720	sequence1:303986..304522(-)	frameshift		304502	WP_003722368.1	N-acetylglucosamine-6-phosphate deacetylase	94.4	44.6	65.5
MGA_288	LOCUS_02730	sequence1:304500..305141(-)	frameshift		304508	WP_003722368.1	N-acetylglucosamine-6-phosphate deacetylase	98.1	54.9	59.8
MGA_305	LOCUS_02900	sequence1:318878..325603(+)	partial			WP_164691239.1	SpaA isopeptide-forming pilin-related protein	94.3	61.8	34.5
MGA_339	LOCUS_03240	sequence1:361097..362017(+)	partial			WP_011108687.1	response regulator	33.3	7.9	39.8
MGA_420	LOCUS_04050	sequence1:440254..440865(+)	partial			WP_005902402.1	TetR/AcrR family transcriptional regulator	65.0	66.1	31.1
MGA_436	LOCUS_04210	sequence1:454497..455081(-)	partial			WP_005809641.1	class I SAM-dependent methyltransferase	66.0	63.6	34.6
MGA_440	LOCUS_04250	sequence1:457836..458186(+)	partial			WP_002383336.1	preprotein translocase subunit YajC	78.4	67.4	65.9
MGA_445	LOCUS_04300	sequence1:463004..464257(+)	partial			WP_002287386.1	NlpC/P60 family protein	97.6	72.3	27.8
MGA_470	LOCUS_04550	sequence1:482416..482679(-)	partial			WP_002668756.1	metalloregulator ArsR/SmtB family transcription factor	90.8	66.7	41.8
MGA_483	LOCUS_04680	sequence1:496146..497303(-)	partial			WP_011861386.1	1-propanol dehydrogenase PduQ	71.2	69.4	38.2
MGA_504	LOCUS_04890	sequence1:522597..524195(-)	partial			WP_011836931.1	sensor histidine kinase	52.1	47.8	31.5
MGA_511	LOCUS_04960	sequence1:529853..532459(+)	partial			WP_010989982.1	lmo2396 family class 1 internalin	47.0	42.6	30.7
MGA_564	LOCUS_05490	sequence1:578959..579606(+)	partial			WP_002262616.1	helix-turn-helix transcriptional regulator	47.4	80.0	36.1
MGA_609	LOCUS_05940	sequence1:621309..621860(+)	partial			WP_002393457.1	cell division protein SepF	85.2	71.0	42.2
MGA_640	LOCUS_06250	sequence1:650354..651199(+)	partial			WP_011921809.1	signal peptidase I	54.8	80.4	31.8
MGA_650	LOCUS_06350	sequence1:662527..672819(+)	partial			WP_013390210.1	beta-N-acetylglucosaminidase domain-containing protein	11.4	18.6	23.5
MGA_660	LOCUS_06450	sequence1:682894..683691(-)	partial			WP_014635952.1	energy-coupling factor transporter transmembrane component T	67.9	71.3	31.7
MGA_737	LOCUS_07220	sequence1:761626..762813(+)	partial			WP_002485939.1	bifunctional glycosyltransferase family 2 protein/CDP-glycerol:glycerophosphate glycerophosphotransferase	87.3	48.1	33.8
MGA_747	LOCUS_07320	sequence1:772060..772854(-)	partial			WP_102865934.1	GH25 family lysozyme	68.6	57.0	35.3
MGA_767	LOCUS_07520	sequence1:791122..793812(+)	partial			WP_011100946.1	glycosyltransferase	70.3	68.2	26.4
MGA_798	LOCUS_07830	sequence1:831090..831497(-)	partial			WP_003547298.1	GNAT family N-acetyltransferase	98.5	74.0	46.6
MGA_803	LOCUS_07880	sequence1:834029..834370(+)	partial			WP_011948333.1	helix-turn-helix transcriptional regulator	74.3	64.6	56.0
MGA_823	LOCUS_08080	sequence1:856891..858495(+)	partial			WP_002378718.1	glucosaminidase domain-containing protein	57.5	63.2	37.9
MGA_828	LOCUS_08130	sequence1:861392..861931(+)	frameshift		861913	WP_001219410.1	alanine dehydrogenase	97.2	46.2	62.6
MGA_829	LOCUS_08140	sequence1:861997..862503(+)	frameshift		861913	WP_003723308.1	alanine dehydrogenase	98.8	44.9	59.6
MGA_830	LOCUS_08150	sequence1:862749..863645(-)	partial			WP_002900658.1	cation diffusion facilitator family transporter	96.3	72.1	50.2
MGA_888	LOCUS_08700	sequence1:923845..925758(-)	partial			WP_003439379.1	ferrous iron transport protein B	67.0	60.6	56.9
MGA_908	LOCUS_08900	sequence1:947807..948631(-)	partial			WP_000822589.1	glycerophosphoryl diester phosphodiesterase membrane domain-containing protein	98.5	46.5	24.6
MGA_918	LOCUS_09000	sequence1:958373..958573(+)	frameshift,internal_stop_codon	958610..958612(+)	958792,958570	WP_188367817.1	recombinase family protein	100.0	31.9	92.4
MGA_919	LOCUS_09010	sequence1:958808..958960(+)	frameshift,internal_stop_codon	958610..958612(+)	958792,958570	WP_188367817.1	recombinase family protein	92.0	22.2	91.3
MGA_936	LOCUS_09180	sequence1:977506..978387(+)	partial			WP_011921635.1	serine hydrolase	81.6	56.6	35.5
MGA_937	LOCUS_09190	sequence1:978393..980036(+)	partial			WP_011476375.1	zinc ribbon domain-containing protein	17.0	59.9	44.3
MGA_1000	LOCUS_09820	sequence1:1038880..1041390(+)	partial			WP_011339403.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	49.2	49.4	35.3
MGA_1019	LOCUS_10010	sequence1:1054843..1055700(+)	frameshift,internal_stop_codon	1054818..1054820(+)	1054801,1054841	WP_002292381.1	L-ribulose-5-phosphate 3-epimerase	100.0	56.9	71.2
MGA_1044	LOCUS_10260	sequence1:1078763..1079353(+)	frameshift,internal_stop_codon	1079351..1079353(+)	1079407	WP_009931568.1	cob(I)yrinic acid a,c-diamide adenosyltransferase	99.0	57.7	55.7
MGA_1060	LOCUS_10420	sequence1:1095532..1096797(+)	partial			WP_002287386.1	NlpC/P60 family protein	73.9	59.7	30.3
MGA_1079	LOCUS_10610	sequence1:1112213..1113958(+)	partial			WP_011861158.1	chromosome segregation protein SMC	61.8	32.4	21.4
MGA_1080	LOCUS_10620	sequence1:1113991..1115706(+)	partial			WP_002378718.1	glucosaminidase domain-containing protein	55.3	63.8	37.9
MGA_1124	LOCUS_11060	sequence1:1164315..1164584(+)	partial			WP_002355063.1	metal-sensitive transcriptional regulator	66.3	68.6	67.8
MGA_1131	LOCUS_11130	sequence1:1171162..1171914(-)	frameshift		1171994	WP_011082549.1	IS1182-like element ISSep1 family transposase	97.6	44.1	51.2
MGA_1132	LOCUS_11140	sequence1:1171953..1172855(-)	frameshift		1171994	WP_095092556.1	IS1182 family transposase	95.7	51.3	50.9
MGA_1134	LOCUS_11160	sequence1:1174414..1174971(-)	frameshift		1174976	WP_011986559.1	proline iminopeptidase-family hydrolase	99.5	62.8	54.3
MGA_1135	LOCUS_11170	sequence1:1174971..1175297(-)	frameshift		1174976	WP_011986559.1	proline iminopeptidase-family hydrolase	99.1	36.2	70.1
MGA_1151	LOCUS_11330	sequence1:1192605..1192874(-)	partial			WP_003230325.1	multidrug efflux transcriptional regulator BmrR	76.4	24.8	52.2
MGA_1152	LOCUS_11340	sequence1:1192990..1194183(+)	frameshift		1194153,1194150	WP_003721852.1	MucBP domain-containing protein	37.8	24.3	35.2
MGA_1163	LOCUS_11450	sequence1:1202379..1202876(+)	partial			WP_001235430.1	GNAT family protein	53.3	49.4	40.9
MGA_1164	LOCUS_11460	sequence1:1203013..1203510(+)	partial			WP_011388310.1	GNAT family protein	89.1	70.3	29.7
MGA_1170	LOCUS_11520	sequence1:1207898..1210675(-)	partial			WP_010990018.1	SpaA isopeptide-forming pilin-related protein	59.1	36.1	34.0
MGA_1207	LOCUS_11890	sequence1:1245753..1247543(+)	partial			WP_010940281.1	ABC transporter substrate binding protein	41.9	21.9	31.0
MGA_1208	LOCUS_11900	sequence1:1247565..1248218(+)	internal_stop_codon	1248216..1248218(+)		WP_011837134.1	YafY family protein	88.5	62.0	45.3
MGA_1210	LOCUS_11920	sequence1:1248555..1248932(+)	partial			WP_014466631.1	DUF3224 domain-containing protein	76.0	70.2	31.6
MGA_1230	LOCUS_12120	sequence1:1268731..1269141(+)	partial			WP_010905251.1	YcjF family protein	97.8	60.8	37.6
MGA_1249	LOCUS_12310	sequence1:1289006..1290388(+)	frameshift		1290379	WP_005812452.1	ATP-binding cassette domain-containing protein	98.9	50.1	40.3
MGA_1270	LOCUS_12520	sequence1:1312075..1313817(+)	frameshift,internal_stop_codon	1313815..1313817(+),1313833..1313835(+)	1313850	WP_010706747.1	DUF1116 domain-containing protein	99.7	57.9	52.4
MGA_1271	LOCUS_12530	sequence1:1313838..1315094(+)	frameshift,internal_stop_codon	1313815..1313817(+),1313833..1313835(+)	1313850	WP_010706747.1	DUF1116 domain-containing protein	98.8	41.5	67.3
MGA_1293	LOCUS_12750	sequence1:1341550..1341990(+)	partial			WP_002290819.1	GNAT family N-acetyltransferase	74.7	76.4	31.8
MGA_1295	LOCUS_12770	sequence1:1342250..1342585(+)	frameshift		1342582	WP_002296188.1	magnesium-translocating P-type ATPase	98.2	12.4	52.3
MGA_1296	LOCUS_12780	sequence1:1342708..1344891(+)	frameshift		1342582	WP_002296188.1	magnesium-translocating P-type ATPase	100.0	82.4	71.9
MGA_1345	LOCUS_13270	sequence1:1394616..1395179(+)	partial			WP_011261733.1	isoprenylcysteine carboxylmethyltransferase family protein	57.8	67.1	32.1
MGA_1403	LOCUS_13850	sequence1:1457007..1459319(+)	partial			WP_013913612.1	helix-turn-helix domain-containing protein	52.5	58.7	25.2
MGA_1425	LOCUS_14070	sequence1:1480827..1481693(-)	partial			WP_005785776.1	LysR family transcriptional regulator	64.6	64.8	27.5
MGA_1437	LOCUS_14190	sequence1:1493312..1493989(+)	frameshift		1493947	WP_002382324.1	DegV family protein	92.0	73.0	53.6
MGA_1438	LOCUS_14200	sequence1:1493937..1494182(+)	frameshift		1493947	WP_002286075.1	DegV family protein	91.4	26.2	45.9
MGA_1448	LOCUS_14300	sequence1:1504113..1505312(-)	partial			WP_011674833.1	hypothetical protein	72.7	77.5	21.5
MGA_1451	LOCUS_14330	sequence1:1506796..1507350(+)	frameshift		1507203	WP_002355943.1	NCS2 family permease	73.9	29.1	84.6
MGA_1452	LOCUS_14340	sequence1:1507320..1508231(+)	frameshift		1507203	WP_002355943.1	NCS2 family permease	100.0	64.7	66.7
MGA_1501	LOCUS_14830	sequence1:1551164..1551922(+)	frameshift		1551919	WP_011860706.1	fused FliR family export protein/FlhB family type III secretion system protein	92.5	38.7	32.3
MGA_1502	LOCUS_14840	sequence1:1551927..1552994(+)	frameshift		1551919	WP_011860706.1	fused FliR family export protein/FlhB family type III secretion system protein	98.3	57.6	39.3
MGA_1527	LOCUS_15090	sequence1:1576657..1578156(+)	partial			WP_011392286.1	flagellar filament capping protein FliD	68.5	55.1	31.8
MGA_1552	LOCUS_15340	sequence1:1597327..1599231(+)	partial			WP_011202294.1	site-specific DNA-methyltransferase	65.9	66.3	40.8
MGA_1573	LOCUS_15550	sequence1:1619536..1619712(+)	partial			WP_003694124.1	30S ribosomal protein S21	74.1	70.5	100.0
MGA_1585	LOCUS_15670	sequence1:1631772..1633310(+)	partial			WP_193486214.1	Stk1 family PASTA domain-containing Ser/Thr kinase	57.0	43.5	23.4
MGA_1593	LOCUS_15750	sequence1:1645218..1646717(+)	partial			WP_002378718.1	glucosaminidase domain-containing protein	33.3	33.2	50.9
MGA_1594	LOCUS_15760	sequence1:1646745..1650383(+)	partial			WP_011461425.1	cell wall-binding repeat-containing protein	29.0	42.9	28.2
MGA_1595	LOCUS_15770	sequence1:1650457..1652169(+)	partial			WP_005812448.1	DUF4430 domain-containing protein	11.2	22.9	42.2
MGA_1596	LOCUS_15780	sequence1:1652147..1654036(+)	partial			WP_011461425.1	cell wall-binding repeat-containing protein	57.9	51.4	33.4
MGA_1597	LOCUS_15790	sequence1:1654033..1654587(+)	partial			WP_005812448.1	DUF4430 domain-containing protein	76.6	49.8	46.8
MGA_1599	LOCUS_15810	sequence1:1655437..1657137(+)	partial			WP_005812452.1	ATP-binding cassette domain-containing protein	96.8	59.8	49.3
MGA_1603	LOCUS_15850	sequence1:1659940..1662306(+)	partial			WP_066523182.1	transglutaminase domain-containing protein	13.7	13.1	36.4
MGA_1610	LOCUS_15920	sequence1:1668970..1670151(-)	partial			WP_011393551.1	serine hydrolase	55.2	65.8	29.3
MGA_1612	LOCUS_15940	sequence1:1672083..1676114(+)	partial			WP_011986288.1	Ig-like domain-containing protein	7.2	32.6	35.0
MGA_1615	LOCUS_15970	sequence1:1676859..1682030(+)	partial			WP_003115288.1	two-partner secretion system exoprotein TpsA4	9.3	10.5	32.1
MGA_1654	LOCUS_16360	sequence1:1714394..1714990(-)	partial			WP_011986582.1	VanZ family protein	83.8	74.6	40.8
MGA_1661	LOCUS_16430	sequence1:1720448..1721488(+)	partial			WP_002382310.1	cell division site-positioning protein MapZ family protein	98.6	52.2	30.0
MGA_1675	LOCUS_16570	sequence1:1740028..1742286(+)	partial			WP_011674709.1	C39 family peptidase	28.2	46.8	41.5
MGA_1679	LOCUS_16610	sequence1:1745096..1747720(-)	partial			WP_011921635.1	serine hydrolase	29.1	59.4	40.8
MGA_1703	LOCUS_16850	sequence1:1774333..1774977(-)	partial			WP_000417572.1	LLM class flavin-dependent oxidoreductase	72.9	43.3	62.8
MGA_1765	LOCUS_17470	sequence1:1834375..1835580(-)	partial			WP_010922507.1	response regulator	26.2	43.1	35.8
MGA_1829	LOCUS_18110	sequence1:1901579..1901809(-)	partial			WP_002294955.1	YneF family protein	72.4	74.3	74.5
MGA_1849	LOCUS_18310	sequence1:1919006..1920271(-)	partial			WP_002288451.1	UDP-glucose--hexose-1-phosphate uridylyltransferase	82.4	74.9	32.9
MGA_1882	LOCUS_18640	sequence1:1954596..1954751(-)	partial			WP_002356384.1	teichoic acid D-Ala incorporation-associated protein DltX	70.6	73.5	58.3
MGA_1892	LOCUS_18700	sequence1:1965100..1965537(-)	partial			WP_002357403.1	EbsA family protein	76.6	72.5	33.9
MGA_1894	LOCUS_18720	sequence1:1966018..1966677(-)	frameshift		1966754	WP_002364185.1	ferrochelatase	96.3	67.1	48.8
MGA_1895	LOCUS_18730	sequence1:1966743..1966967(-)	frameshift		1966751	WP_164925680.1	ferrochelatase	93.2	19.8	62.3
MGA_1941	LOCUS_19190	sequence1:2013611..2015863(-)	partial			WP_010989592.1	bacterial Ig-like domain-containing protein	84.4	28.4	33.9
MGA_1942	LOCUS_19200	sequence1:2016108..2016884(-)	frameshift,internal_stop_codon	2016893..2016895(-)	2016913,2016868,2016853,2016856,2016889,2016874	WP_010989592.1	bacterial Ig-like domain-containing protein	86.4	10.0	37.7
MGA_1996	LOCUS_19740	sequence1:2076478..2077755(+)	partial			WP_002317658.1	hydroxymethylglutaryl-CoA reductase, degradative	98.8	51.2	50.8
MGA_2011	LOCUS_19890	sequence1:2098463..2099095(+)	partial			WP_000822292.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	47.1	37.2	35.4
MGA_2104	LOCUS_20820	sequence1:2196349..2198571(-)	partial			WP_010989592.1	bacterial Ig-like domain-containing protein	76.9	25.2	30.1
MGA_2118	LOCUS_20960	sequence1:2213179..2215416(-)	partial			WP_000161220.1	trypsin-like serine protease	34.5	65.9	25.0
MGA_2126	LOCUS_21040	sequence1:2223520..2225748(-)	partial			WP_002383753.1	DUF5776 domain-containing protein	42.5	36.5	38.5
MGA_2161	LOCUS_21370	sequence1:2261948..2263462(-)	partial			WP_011674015.1	TPM domain-containing protein	42.3	48.5	31.8
MGA_2184	LOCUS_21600	sequence1:2283141..2284142(-)	partial			WP_002289045.1	DUF58 domain-containing protein	67.3	73.2	26.7
MGA_2198	LOCUS_21740	sequence1:2301591..2315150(-)	partial			WP_011837563.1	Cna B-type domain-containing protein	24.9	70.1	32.7
MGA_2202	LOCUS_21780	sequence1:2318534..2322952(-)	partial			WP_010905155.1	SpaA isopeptide-forming pilin-related protein	28.6	20.9	24.2
MGA_2207	LOCUS_21830	sequence1:2326895..2327701(-)	partial			WP_003246088.1	signal peptidase I	56.7	76.3	32.1
MGA_2232	LOCUS_22080	sequence1:2351833..2352999(-)	partial			WP_071854804.1	DUF4767 domain-containing protein	46.4	55.1	47.3
MGA_2243	LOCUS_22190	sequence1:2363589..2365160(-)	partial			WP_011109578.1	EF3023 family LPXTG-anchored polysaccharide lyase	37.3	12.5	29.7
MGA_2288	LOCUS_22640	sequence1:2402277..2402729(-)	partial			WP_010989702.1	BMC domain-containing protein	63.3	54.9	47.4
MGA_2325	LOCUS_22980	sequence1:2438179..2438469(+)	frameshift		2438460	WP_095007062.1	IS3-like element ISEfa8 family transposase	96.9	24.0	63.4
MGA_2326	LOCUS_22990	sequence1:2438511..2439308(+)	frameshift		2438466	WP_157061663.1	IS3 family transposase	96.6	66.1	55.5
MGA_2329	LOCUS_23020	sequence1:2441174..2441788(-)	partial			WP_012775247.1	DUF3955 domain-containing protein	33.3	43.0	45.6
MGA_2347	LOCUS_23200	sequence1:2459485..2460027(+)	partial			WP_000794333.1	restriction endonuclease subunit S	77.2	32.4	29.8
MGA_2351	LOCUS_23240	sequence1:2463975..2464829(+)	internal_stop_codon	2464827..2464829(+)		WP_000751387.1	serine hydrolase domain-containing protein	93.7	55.2	55.6
MGA_2355	LOCUS_23280	sequence1:2467523..2468428(-)	partial			WP_008765598.1	SDR family oxidoreductase	42.9	39.1	35.3
MGA_2357	LOCUS_23300	sequence1:2468991..2469905(-)	partial			WP_001557159.1	DMT family transporter	47.0	47.2	38.1
MGA_2370	LOCUS_23430	sequence1:2484622..2485659(-)	internal_stop_codon	2484622..2484624(-)		WP_095092556.1	IS1182 family transposase	100.0	61.7	53.2
MGA_2396	LOCUS_23690	sequence1:2511464..2512081(+)	partial			WP_011269213.1	TetR/AcrR family transcriptional regulator	73.2	67.7	32.0
MGA_2424	LOCUS_23970	sequence1:2540172..2541509(-)	partial			WP_012048295.1	bis-aminopropyl spermidine synthase family protein	70.3	80.4	34.9
MGA_2425	LOCUS_23980	sequence1:2541543..2542037(-)	partial			WP_003243967.1	TetR family transcriptional regulator	79.9	70.2	29.2
MGA_2436	LOCUS_24090	sequence1:2552421..2552846(-)	partial			WP_002286048.1	PTS sugar transporter subunit IIA	96.5	20.9	34.3
MGA_2472	LOCUS_24450	sequence1:2587516..2588802(-)	partial			WP_071854804.1	DUF4767 domain-containing protein	48.4	60.5	43.5
MGA_2481	LOCUS_24540	sequence1:2599309..2601504(-)	partial			WP_004398589.1	PBP1A family penicillin-binding protein	83.9	64.7	27.8
MGA_2485	LOCUS_24580	sequence1:2606524..2607354(-)	partial			WP_104859673.1	IS256 family transposase	100.0	71.0	93.1
MGA_2488	LOCUS_24610	sequence1:2608869..2609624(+)	partial			WP_185847435.1	GHKL domain-containing protein	100.0	57.8	99.2
MGA_2495	LOCUS_24680	sequence1:2615137..2615925(+)	frameshift		2615922	WP_011016550.1	type II CAAX endopeptidase family protein	68.7	61.4	31.7
MGA_2496	LOCUS_24690	sequence1:2616153..2616401(-)	partial			WP_012775452.1	adenylate kinase	96.3	46.5	69.6
MGA_2512	LOCUS_24850	sequence1:2628896..2629402(+)	frameshift		2629381	WP_011101803.1	site-specific integrase	96.4	42.3	47.2
MGA_2513	LOCUS_24860	sequence1:2629390..2630049(+)	frameshift		2629378	WP_087235334.1	site-specific integrase	94.5	53.5	49.8
MGA_2535	LOCUS_25080	sequence1:2648393..2650945(-)	partial			WP_000161220.1	trypsin-like serine protease	18.7	48.3	30.1
MGA_2562	LOCUS_25350	sequence1:2678557..2681697(-)	partial			WP_010989350.1	bifunctional metallophosphatase/5'-nucleotidase	62.7	81.2	44.5
MGA_2606	LOCUS_25790	sequence1:2727077..2727715(+)	partial			WP_000577652.1	helix-turn-helix transcriptional regulator	47.6	72.5	35.2
MGA_2607	LOCUS_25800	sequence1:2727783..2728454(-)	partial			WP_001079707.1	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	92.4	46.2	36.3
MGA_2650	LOCUS_26230	sequence1:2774817..2775020(-)	frameshift,internal_stop_codon	2774816..2774818(-)	2775073	WP_010989662.1	tyrosine-type recombinase/integrase	100.0	16.8	80.6
MGA_2651	LOCUS_26240	sequence1:2775423..2775794(-)	partial			WP_010989680.1	LPXTG cell wall anchor domain-containing protein	77.2	11.1	68.8
MGA_2653	LOCUS_26260	sequence1:2776134..2777216(-)	partial			WP_041272166.1	DNA cytosine methyltransferase	58.3	30.9	52.0
MGA_2658	LOCUS_26310	sequence1:2780714..2782459(-)	partial			WP_010939369.1	sulfur carrier protein ThiS adenylyltransferase ThiF	27.2	69.0	27.8
MGA_2664	LOCUS_26370	sequence1:2790072..2790254(-)	partial			WP_011674628.1	LysM peptidoglycan-binding domain-containing protein	96.7	4.4	50.0
MGA_2670	LOCUS_26430	sequence1:2794993..2796024(-)	partial			WP_003404801.1	fumarylacetoacetate hydrolase family protein	81.0	42.7	30.4
MGA_2671	LOCUS_26440	sequence1:2796055..2797284(-)	partial			WP_010870909.1	2-isopropylmalate synthase	87.3	70.5	33.2
MGA_2672	LOCUS_26450	sequence1:2797560..2798195(+)	partial			WP_010868582.1	TetR/AcrR family transcriptional regulator	62.1	64.5	29.9
MGA_2673	LOCUS_26460	sequence1:2798403..2801789(-)	partial			WP_080388512.1	hyperosmolarity resistance protein Ebh	84.0	9.3	18.7
MGA_2692	LOCUS_26650	sequence1:2816522..2817286(+)	partial			WP_009930648.1	AAC(3) family N-acetyltransferase	61.8	64.6	36.7
MGA_2704	LOCUS_26770	sequence1:2828301..2828759(-)	partial			WP_011948695.1	MarR family transcriptional regulator	71.7	64.4	32.1
MGA_2708	LOCUS_26810	sequence1:2830641..2831987(+)	frameshift		2831975	WP_095092556.1	IS1182 family transposase	100.0	80.0	52.1
MGA_2710	LOCUS_26830	sequence1:2832897..2833400(-)	partial			WP_002296311.1	RDD family protein	87.4	66.7	57.8
MGA_2714	LOCUS_26870	sequence1:2835820..2837157(-)	partial			WP_002387692.1	TPM domain-containing protein	66.7	69.9	33.8
MGA_2727	LOCUS_27000	sequence1:2851514..2852095(-)	partial			WP_003436406.1	M15 family metallopeptidase	92.2	66.0	39.9
MGA_2729	LOCUS_27020	sequence1:2853279..2855237(-)	partial			WP_008765905.1	GDSL-type esterase/lipase family protein	35.0	47.3	38.1
MGA_2753	LOCUS_27260	sequence1:2873703..2874233(+)	partial			WP_002895510.1	TraX family protein	85.8	58.1	47.7
MGA_2755	LOCUS_27280	sequence1:2876007..2876243(+)	partial			WP_002895510.1	TraX family protein	82.1	25.7	41.8
MGA_2761	LOCUS_27340	sequence1:2880581..2882884(-)	partial			WP_015942796.1	InlB B-repeat-containing protein	33.2	18.3	36.6
MGA_2770	LOCUS_27430	sequence1:2890972..2893740(+)	partial			WP_002382901.1	polysaccharide deacetylase family protein	32.9	58.9	45.4
MGA_2782	LOCUS_27550	sequence1:2902889..2903323(-)	partial			WP_011261776.1	two-component system response regulator BtsR	44.4	26.9	40.6
MGA_2785	LOCUS_27580	sequence1:2905320..2906060(-)	partial			WP_000245304.1	polysaccharide deacetylase family protein	83.7	51.3	30.5
MGA_2805	LOCUS_27780	sequence1:2923425..2924051(+)	frameshift,internal_stop_codon	2924049..2924051(+)	2924111	WP_001830664.1	anaerobic C4-dicarboxylate transporter	94.2	45.4	51.5
MGA_2806	LOCUS_27790	sequence1:2924213..2924710(+)	frameshift,internal_stop_codon	2924049..2924051(+)	2924111	WP_001830664.1	anaerobic C4-dicarboxylate transporter	95.8	36.6	46.8
MGA_2813	LOCUS_27860	sequence1:2930808..2930960(+)	frameshift		2930936	WP_002376560.1	ABC transporter substrate-binding protein	86.0	12.0	55.8
MGA_2814	LOCUS_27870	sequence1:2931023..2931880(+)	frameshift		2930936	WP_002376560.1	ABC transporter substrate-binding protein	100.0	79.8	76.5
MGA_2833	LOCUS_28060	sequence1:2952017..2952445(-)	internal_stop_codon	2952470..2952472(-)		WP_000599739.1	Fic family protein	85.2	60.2	70.2
MGA_2887	LOCUS_28600	sequence1:3000328..3000960(+)	partial			WP_010963361.1	TetR/AcrR family transcriptional regulator	71.9	79.9	23.7
MGA_2889	LOCUS_28620	sequence1:3001513..3003999(-)	partial			WP_010921991.1	chromosome segregation protein SMC	41.2	25.1	22.0
MGA_2890	LOCUS_28630	sequence1:3004220..3006844(-)	partial			WP_010990081.1	class 1 internalin InlJ	24.7	25.5	30.1
MGA_2898	LOCUS_28710	sequence1:3016616..3018280(-)	frameshift		3018324	WP_002289035.1	ATP-dependent Clp protease ATP-binding subunit	99.3	66.3	72.2
MGA_2899	LOCUS_28720	sequence1:3018277..3019095(-)	frameshift		3018324	WP_002289035.1	ATP-dependent Clp protease ATP-binding subunit	94.5	31.2	57.5
MGA_2907	LOCUS_28790	sequence2:8010..9449(-)	partial			WP_010989464.1	LapB repeat-containing protein	53.2	13.2	27.8
MGA_2912	LOCUS_28840	sequence2:12249..13622(-)	partial			WP_002378718.1	glucosaminidase domain-containing protein	61.7	52.5	43.6
MGA_2915	LOCUS_28870	sequence2:14631..18371(-)	partial			WP_010989680.1	LPXTG cell wall anchor domain-containing protein	59.1	76.0	33.5
MGA_2923	LOCUS_28950	sequence2:26869..27255(-)	partial			WP_002387548.1	hypothetical protein	58.6	54.0	36.0
MGA_2935	LOCUS_29070	sequence2:38869..39084(-)	internal_stop_codon	39097..39099(-)		WP_033728358.1	recombinase family protein	85.9	31.9	95.1
MGA_2936	LOCUS_29080	sequence2:39097..39456(-)	internal_stop_codon	39097..39099(-)		WP_033728358.1	recombinase family protein	100.0	62.3	91.6
MGA_2941	LOCUS_29130	sequence2:41875..42528(-)	partial			WP_011183326.1	DUF2130 domain-containing protein	78.8	35.3	25.7
MGA_2953	LOCUS_29250	sequence2:48988..56055(-)	partial			WP_010774229.1	DEAD/DEAH box helicase family protein	66.4	49.5	41.1
MGA_2955	LOCUS_29270	sequence2:56589..58235(-)	partial			WP_011674167.1	ArdC-like ssDNA-binding domain-containing protein	97.1	61.9	30.8
MGA_2960	LOCUS_29320	sequence2:61307..>61957(-)	partial			WP_062284982.1	peptidoglycan DD-metalloendopeptidase family protein	89.8	53.4	38.5
MGA_2968	LOCUS_29390	sequence3:5171..5587(+)	partial			WP_010905251.1	YcjF family protein	81.2	51.6	53.6
MGA_2970	LOCUS_29410	sequence3:7129..8130(-)	partial			WP_011035595.1	hypothetical protein	48.9	57.8	32.7
MGA_2971	LOCUS_29420	sequence3:8289..8555(-)	partial			WP_012546378.1	helix-turn-helix transcriptional regulator	84.1	58.5	43.4
MGA_2986	LOCUS_29570	sequence3:25220..25951(-)	partial			WP_011109477.1	endocarditis and biofilm-associated pilus major subunit EbpC	74.1	28.5	34.8
MGA_2995	LOCUS_29660	sequence3:36051..36629(+)	frameshift		36617	WP_002287940.1	Y-family DNA polymerase	98.4	41.2	88.4
MGA_2996	LOCUS_29670	sequence3:36626..36928(+)	frameshift		36617	WP_002287940.1	Y-family DNA polymerase	100.0	20.9	88.0
MGA_2999	LOCUS_29700	sequence3:38046..38495(-)	partial			WP_010706793.1	DNA repair protein RadC	93.3	61.6	42.7