{ "tc_result": [ { "organism_name": "Acidovorax wautersii", "strain": "strain=DSM 27981", "accession": "GCA_900113035.1", "taxid": 1177982, "species_taxid": 1177982, "relation_to_type": "type", "validated": true, "ani": 83.9363, "matched_fragments": 913, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax anthurii", "strain": "strain=CFPB 3232", "accession": "GCA_003269065.1", "taxid": 78229, "species_taxid": 78229, "relation_to_type": "type", "validated": true, "ani": 83.8663, "matched_fragments": 919, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax caeni", "strain": "strain=R-24608", "accession": "GCA_001298675.1", "taxid": 343013, "species_taxid": 343013, "relation_to_type": "type", "validated": true, "ani": 83.671, "matched_fragments": 808, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax caeni", "strain": "strain=R-24608", "accession": "GCA_900116825.1", "taxid": 343013, "species_taxid": 343013, "relation_to_type": "type", "validated": true, "ani": 83.555, "matched_fragments": 809, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax citrulli", "strain": "strain=DSM 17060", "accession": "GCA_900100305.1", "taxid": 80869, "species_taxid": 80869, "relation_to_type": "type", "validated": true, "ani": 83.354, "matched_fragments": 899, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax kalamii", "strain": "strain=KNDSW-TSA6", "accession": "GCA_002245625.1", "taxid": 2004485, "species_taxid": 2004485, "relation_to_type": "type", "validated": true, "ani": 83.3128, "matched_fragments": 997, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax oryzae", "strain": "strain=ATCC 19882", "accession": "GCA_000687165.1", "taxid": 862720, "species_taxid": 862720, "relation_to_type": "type", "validated": true, "ani": 83.3051, "matched_fragments": 929, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax avenae subsp. avenae", "strain": "strain=ATCC 19860", "accession": "GCA_000176855.2", "taxid": 80870, "species_taxid": 80867, "relation_to_type": "suspected-type", "validated": true, "ani": 83.2507, "matched_fragments": 942, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax soli", "strain": "strain=DSM 25157", "accession": "GCA_900107605.1", "taxid": 592050, "species_taxid": 592050, "relation_to_type": "type", "validated": true, "ani": 83.1339, "matched_fragments": 823, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax cattleyae", "strain": "strain=DSM 17101", "accession": "GCA_900104515.1", "taxid": 80868, "species_taxid": 80868, "relation_to_type": "type", "validated": true, "ani": 82.9967, "matched_fragments": 934, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax valerianellae", "strain": "strain=DSM 16619", "accession": "GCA_900102625.1", "taxid": 187868, "species_taxid": 187868, "relation_to_type": "type", "validated": true, "ani": 82.8596, "matched_fragments": 907, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Delftia acidovorans", "strain": "strain=FDAARGOS_997", "accession": "GCA_016127415.1", "taxid": 80866, "species_taxid": 80866, "relation_to_type": "type", "validated": true, "ani": 82.7865, "matched_fragments": 955, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax radicis", "strain": "strain=N35", "accession": "GCA_000204195.2", "taxid": 758826, "species_taxid": 758826, "relation_to_type": "type", "validated": true, "ani": 82.6614, "matched_fragments": 1002, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax carolinensis", "strain": "strain=NA3", "accession": "GCA_002157145.1", "taxid": 553814, "species_taxid": 553814, "relation_to_type": "type", "validated": true, "ani": 82.6581, "matched_fragments": 851, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax facilis", "strain": "strain=DSM 649", "accession": "GCA_023913775.1", "taxid": 12917, "species_taxid": 12917, "relation_to_type": "type", "validated": true, "ani": 82.6351, "matched_fragments": 947, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Comamonas terrae", "strain": "strain=NBRC 106524", "accession": "GCA_001544075.1", "taxid": 673548, "species_taxid": 673548, "relation_to_type": "type", "validated": true, "ani": 82.6015, "matched_fragments": 857, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Comamonas phosphati", "strain": "strain=CGMCC 1.12294", "accession": "GCA_014637085.1", "taxid": 1211803, "species_taxid": 1211803, "relation_to_type": "type", "validated": true, "ani": 82.4916, "matched_fragments": 768, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hydrogenophaga crocea", "strain": "strain=BA0156", "accession": "GCA_011388215.1", "taxid": 2716225, "species_taxid": 2716225, "relation_to_type": "type", "validated": true, "ani": 81.509, "matched_fragments": 749, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xylophilus ampelinus", "strain": "strain=CFBP 1192", "accession": "GCA_024832295.1", "taxid": 54067, "species_taxid": 54067, "relation_to_type": "type", "validated": true, "ani": 80.5667, "matched_fragments": 625, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Diaphorobacter aerolatus", "strain": "strain=KACC 16536", "accession": "GCA_014489535.1", "taxid": 1288495, "species_taxid": 1288495, "relation_to_type": "type", "validated": true, "ani": 80.3035, "matched_fragments": 682, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter agri", "strain": "strain=G-1-2-2", "accession": "GCA_012927085.1", "taxid": 2728837, "species_taxid": 2728837, "relation_to_type": "type", "validated": true, "ani": 80.1358, "matched_fragments": 761, "total_fragments": 1559, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014489595.1", "gtdb_species": "s__Acidovorax_F monticola", "ani": 100.0, "matched_fragments": 1559, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_F", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.51", "min_intra_species_ani": "97.51", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_000204645.1", "gtdb_species": "s__Alicycliphilus denitrificans", "ani": 84.8137, "matched_fragments": 931, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Alicycliphilus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.26", "min_intra_species_ani": "95.80", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.76", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCA_001725235.1", "gtdb_species": "s__Acidovorax_C sp001725235", "ani": 84.8003, "matched_fragments": 891, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.36", "min_intra_species_ani": "96.90", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.83", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003604195.1", "gtdb_species": "s__Giesbergeria lacusdiani", "ani": 84.3212, "matched_fragments": 844, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Giesbergeria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003053545.1", "gtdb_species": "s__Acidovorax sp003053545", "ani": 84.0232, "matched_fragments": 1057, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.66", "min_intra_species_ani": "97.32", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900113035.1", "gtdb_species": "s__Acidovorax_A wautersii", "ani": 83.9696, "matched_fragments": 909, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003269065.1", "gtdb_species": "s__Acidovorax_A anthurii", "ani": 83.8683, "matched_fragments": 917, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014207955.1", "gtdb_species": "s__Acidovorax soli_A", "ani": 83.8468, "matched_fragments": 1080, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003755025.1", "gtdb_species": "s__Diaphorobacter nitroreducens", "ani": 83.7409, "matched_fragments": 865, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Diaphorobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.11", "min_intra_species_ani": "97.62", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.81", "num_clustered_genomes": 15, "status": "-" }, { "accession": "GCF_001298675.1", "gtdb_species": "s__Acidovorax_C caeni", "ani": 83.6734, "matched_fragments": 806, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001428665.1", "gtdb_species": "s__Acidovorax sp001428665", "ani": 83.5798, "matched_fragments": 1064, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.34", "min_intra_species_ani": "97.34", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002397315.1", "gtdb_species": "s__Acidovorax_A sp002397315", "ani": 83.542, "matched_fragments": 920, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900100305.1", "gtdb_species": "s__Acidovorax_A citrulli", "ani": 83.4012, "matched_fragments": 894, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.47", "min_intra_species_ani": "99.27", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.96", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCF_000687165.1", "gtdb_species": "s__Acidovorax_A oryzae", "ani": 83.2727, "matched_fragments": 933, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_A", "ani_circumscription_radius": 95.2137, "mean_intra_species_ani": "98.08", "min_intra_species_ani": "98.08", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000176855.2", "gtdb_species": "s__Acidovorax_A avenae", "ani": 83.2458, "matched_fragments": 939, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_A", "ani_circumscription_radius": 95.2137, "mean_intra_species_ani": "96.92", "min_intra_species_ani": "95.92", "mean_intra_species_af": "0.74", "min_intra_species_af": "0.51", "num_clustered_genomes": 18, "status": "-" }, { "accession": "GCF_900102625.1", "gtdb_species": "s__Acidovorax_A valerianellae", "ani": 82.8281, "matched_fragments": 912, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001544075.1", "gtdb_species": "s__Comamonas terrae", "ani": 82.6449, "matched_fragments": 853, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Comamonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017998575.1", "gtdb_species": "s__JAGOCV01 sp017998575", "ani": 80.4696, "matched_fragments": 557, "total_fragments": 1559, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAGOCV01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }