# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00030	sequence01:1601..2095(+)	internal_stop_codon	1478..1480(+)		WP_011020063.1	IS21-like element ISMac3 family helper ATPase IstB	93.9	59.9	46.8
MGA_6	LOCUS_00050	sequence03:41..>650(-)	partial			WP_165992825.1	IS3 family transposase	98.5	52.2	48.5
MGA_41	LOCUS_00400	sequence04:37069..38154(-)	partial			WP_010989462.1	class 1 internalin InlA	76.7	31.6	34.4
MGA_53	LOCUS_00520	sequence04:50008..50667(+)	partial			WP_010966294.1	ABC-F family ATP-binding cassette domain-containing protein	95.9	36.6	31.4
MGA_103	LOCUS_01020	sequence04:101828..102367(+)	partial			WP_010989431.1	LXG domain-containing protein	100.0	36.5	92.7
MGA_118	LOCUS_01170	sequence04:112509..114479(+)	partial			WP_010989462.1	class 1 internalin InlA	89.0	73.8	49.8
MGA_145	LOCUS_01440	sequence04:137888..139498(+)	partial			WP_011837107.1	ATP-binding protein	45.7	45.3	30.8
MGA_162	LOCUS_01610	sequence04:154329..155561(+)	partial			WP_000791146.1	M4 family metallopeptidase	56.3	26.6	33.1
MGA_270	LOCUS_02690	sequence04:269203..270411(+)	partial			WP_010905481.1	restriction endonuclease subunit S	47.3	46.2	57.9
MGA_352	LOCUS_03510	sequence04:359226..359645(+)	internal_stop_codon	359181..359183(+)		WP_003723402.1	HdeD family acid-resistance protein	99.3	78.9	87.0
MGA_408	LOCUS_04070	sequence04:412326..414167(+)	partial			WP_010989452.1	class 1 internalin InlF	91.5	68.1	40.1
MGA_412	LOCUS_04110	sequence04:416632..419121(+)	partial			WP_010989427.1	class 1 internalin InlI	41.3	19.6	41.4
MGA_482	LOCUS_04810	sequence04:477319..477531(-)	partial			WP_003721846.1	LPXTG cell wall anchor domain-containing protein	71.4	71.4	76.0
MGA_488	LOCUS_04870	sequence04:482341..483894(+)	partial			WP_010989386.1	class 1 internalin InlH	79.1	71.5	35.9
MGA_489	LOCUS_04880	sequence04:483956..485929(-)	partial			WP_010989876.1	class 1 internalin InlL	71.1	76.4	54.6
MGA_583	LOCUS_05820	sequence04:586530..587087(+)	internal_stop_codon	587085..587087(+)		WP_010989593.1	amino acid ABC transporter substrate-binding protein/permease	100.0	38.5	96.2
MGA_584	LOCUS_05830	sequence04:587118..587972(+)	internal_stop_codon	587085..587087(+)		WP_010989593.1	amino acid ABC transporter substrate-binding protein/permease	100.0	59.2	95.4
MGA_674	LOCUS_06730	sequence04:675784..676053(+)	partial			WP_001830478.1	MFS transporter	71.9	15.5	39.1
MGA_743	LOCUS_07420	sequence04:737546..737755(-)	partial			WP_003722866.1	YkvS family protein	87.0	63.8	100.0
MGA_809	LOCUS_08080	sequence04:803273..805363(+)	partial			WP_011674970.1	membrane protein	55.5	60.9	26.1
MGA_810	LOCUS_08090	sequence04:805451..807775(+)	partial			WP_010989657.1	CDP-glycerol glycerophosphotransferase family protein	47.9	52.9	35.6
MGA_815	LOCUS_08140	sequence04:811819..813207(+)	partial			WP_009968267.1	glycosyltransferase family 2 protein	69.7	71.5	42.5
MGA_816	LOCUS_08150	sequence04:813207..814361(+)	partial			WP_003243463.1	teichoic acid poly(glycerol phosphate) polymerase	99.0	51.3	56.5
MGA_825	LOCUS_08240	sequence04:822427..822990(+)	partial			WP_002359819.1	hypothetical protein	63.6	57.8	42.5
MGA_828	LOCUS_08270	sequence04:823926..825323(+)	partial			WP_010989340.1	LXG domain-containing protein	53.3	48.4	41.0
MGA_947	LOCUS_09460	sequence04:932485..936198(+)	partial			WP_010989982.1	lmo2396 family class 1 internalin	61.0	78.7	32.0
MGA_1126	LOCUS_11250	sequence04:1112916..1114256(-)	partial			WP_010989355.1	T7SS effector LXG polymorphic toxin	75.6	72.9	83.7
MGA_1260	LOCUS_12590	sequence04:1251396..1251773(-)	partial			WP_010989739.1	A24 family peptidase	100.0	53.0	68.0
MGA_1297	LOCUS_12960	sequence04:1295445..1295882(-)	partial			WP_011101828.1	MerR family transcriptional regulator	79.3	68.0	36.5
MGA_1298	LOCUS_12970	sequence04:1296384..1297322(+)	internal_stop_codon	1297320..1297322(+)		WP_002680024.1	recombinase family protein	96.2	49.7	46.4
MGA_1299	LOCUS_12980	sequence04:1297521..1298078(+)	internal_stop_codon	1297320..1297322(+)		WP_002324544.1	site-specific resolvase TndX	82.7	28.7	24.8
MGA_1422	LOCUS_14200	sequence05:15634..18333(-)	partial			WP_010989814.1	LPXTG cell wall anchor domain-containing protein	25.1	25.1	90.7
MGA_1597	LOCUS_15950	sequence05:194121..194258(+)	partial			WP_003727979.1	hypothetical protein	71.1	71.1	93.8
MGA_1610	LOCUS_16080	sequence05:207882..210176(-)	partial			WP_009932650.1	NlpC/P60 family protein	17.0	57.3	50.4
MGA_1764	LOCUS_17620	sequence05:368879..369055(+)	partial			WP_003722274.1	hypothetical protein	48.3	48.3	100.0
MGA_1882	LOCUS_18800	sequence05:498039..498275(-)	partial			WP_003723667.1	IDEAL domain-containing protein	100.0	66.1	96.2
MGA_1889	LOCUS_18870	sequence05:504614..504739(+)	internal_stop_codon	504587..504589(+)		WP_003731859.1	aminopeptidase C	100.0	9.3	95.1
MGA_1946	LOCUS_19440	sequence06:27663..27833(-)	frameshift		27871	WP_003722726.1	septation regulator SpoVG	67.9	37.3	100.0
MGA_1947	LOCUS_19450	sequence06:27836..27970(-)	frameshift		27871	WP_003722726.1	septation regulator SpoVG	88.6	38.2	84.6
MGA_1948	LOCUS_19460	sequence06:28089..28397(-)	frameshift		27874	WP_003722725.1	septation regulator SpoVG	84.3	84.3	100.0
MGA_1984	LOCUS_19820	sequence06:69848..70627(-)	partial			WP_034349500.1	serine hydrolase	73.7	72.5	30.3
MGA_1994	LOCUS_19920	sequence06:81408..81563(-)	partial			WP_008946553.1	hypothetical protein	98.0	41.3	92.0
MGA_1996	LOCUS_19940	sequence06:82027..83457(-)	partial			WP_010989355.1	T7SS effector LXG polymorphic toxin	67.6	69.7	93.8
MGA_2061	LOCUS_20590	sequence06:150566..152110(-)	internal_stop_codon	152192..152194(-)		WP_010989332.1	toxin	79.0	68.7	83.0
MGA_2065	LOCUS_20630	sequence06:154729..156462(-)	partial			WP_010989332.1	toxin	72.4	69.0	90.7
MGA_2172	LOCUS_21700	sequence06:273189..274151(+)	partial			WP_055270450.1	bacteriophage abortive infection AbiH family protein	91.2	73.3	22.6
MGA_2293	LOCUS_22910	sequence06:396451..396669(+)	partial			WP_010990036.1	helix-turn-helix domain-containing protein	75.0	20.1	92.6
MGA_2391	LOCUS_23890	sequence07:14479..17295(+)	partial			WP_010989452.1	class 1 internalin InlF	45.2	53.3	44.8
MGA_2458	LOCUS_24560	sequence07:81537..82208(+)	internal_stop_codon	82206..82208(+)		WP_009924458.1	DEAD/DEAH box helicase	100.0	50.8	82.5
MGA_2459	LOCUS_24570	sequence07:82356..82511(+)	internal_stop_codon	82206..82208(+)		WP_009924458.1	DEAD/DEAH box helicase	100.0	11.6	74.5
MGA_2707	LOCUS_27050	sequence09:4447..5334(-)	frameshift		5396	WP_165992825.1	IS3 family transposase	95.3	73.0	49.1
MGA_2708	LOCUS_27060	sequence09:5346..5639(-)	frameshift		5396	WP_165992825.1	IS3 family transposase	80.4	20.5	56.4
MGA_2712	LOCUS_27100	sequence09:9763..11604(+)	partial			WP_211204934.1	site-specific DNA-methyltransferase	71.0	84.6	36.1
MGA_2714	LOCUS_27120	sequence09:14869..15075(-)	partial			WP_003548064.1	type II toxin-antitoxin system YafQ family toxin	73.5	43.5	56.0
MGA_2715	LOCUS_27130	sequence09:14996..15169(-)	partial			WP_103152732.1	IS5 family transposase	78.9	17.2	95.6
MGA_2724	LOCUS_27220	sequence09:25479..26165(+)	partial			WP_001041726.1	class A sortase	55.7	58.6	41.7
MGA_2731	LOCUS_27290	sequence09:32609..33010(-)	partial			WP_061086363.1	IS6-like element IS1216 family transposase	89.5	52.7	97.5
MGA_2733	LOCUS_27310	sequence09:34812..35681(-)	partial			WP_002287807.1	ABC transporter permease/substrate binding protein	98.6	48.7	47.9
MGA_2736	LOCUS_27340	sequence09:36591..37316(+)	partial			WP_011674077.1	ISLre2-like element ISLca4 family transposase	88.4	45.2	32.9
MGA_2737	LOCUS_27350	sequence09:37779..38903(+)	internal_stop_codon	38901..38903(+)		WP_002289122.1	heavy metal translocating P-type ATPase	92.2	54.4	45.3
MGA_2738	LOCUS_27360	sequence09:38952..39662(+)	internal_stop_codon	38901..38903(+)		WP_002386960.1	heavy metal translocating P-type ATPase	91.1	34.2	43.8
MGA_2739	LOCUS_27370	sequence09:39733..40134(-)	partial			WP_000531736.1	CadD family cadmium resistance transporter	99.2	64.6	49.6
MGA_2740	LOCUS_27380	sequence09:40864..41145(-)	frameshift,internal_stop_codon	40885..40887(-),40987..40989(-)	41040,40932	WP_061086363.1	IS6-like element IS1216 family transposase	38.7	15.9	94.4
MGA_2747	LOCUS_27450	sequence09:46591..47223(+)	partial			WP_000843735.1	DUF536 domain-containing protein	72.4	62.8	27.0
MGA_2748	LOCUS_27460	sequence09:47234..48649(+)	partial			WP_002287735.1	HsdR family type I site-specific deoxyribonuclease	98.3	44.2	52.9
MGA_2762	LOCUS_27600	sequence09:56098..56919(+)	partial			WP_000738394.1	hypothetical protein	49.1	46.0	25.7
MGA_2763	LOCUS_27610	sequence09:57025..57216(+)	frameshift		57207	WP_011241777.1	recombinase family protein	96.8	31.4	68.9
MGA_2764	LOCUS_27620	sequence09:57246..57611(+)	frameshift		57207	WP_011674185.1	recombinase family protein	100.0	61.5	62.8
MGA_2774	LOCUS_27720	sequence09:64331..65407(+)	partial			WP_011674160.1	NlpC/P60 family protein	51.1	56.5	40.1
MGA_2785	LOCUS_27830	sequence09:73787..74869(+)	partial			WP_047936604.1	ArdC-like ssDNA-binding domain-containing protein	93.1	42.0	36.2
MGA_2788	LOCUS_27860	sequence09:76965..77447(+)	internal_stop_codon	77445..77447(+)		WP_011101137.1	DNA/RNA non-specific endonuclease	69.4	34.2	59.5
MGA_2802	LOCUS_28000	sequence10:70..2253(-)	partial			WP_010774229.1	DEAD/DEAH box helicase family protein	45.3	10.3	48.2
MGA_2804	LOCUS_28020	sequence10:2829..3164(+)	partial			WP_011391783.1	helix-turn-helix transcriptional regulator	55.9	53.9	38.7
MGA_2818	LOCUS_28150	sequence11:3008..3289(+)	frameshift		3238	WP_165992825.1	IS3 family transposase	88.2	21.5	59.8
