{ "type": "genome", "identifier": "GCF_014596295.1", "organism": "Stenotrophomonas lacuserhaii", "title": "Stenotrophomonas lacuserhaii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Institute of Medicinal Biotechnology Chinese Academy of Medical Sciences", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014596295.1", "bioproject": "PRJNA224116", "biosample": "SAMN15698559", "wgs_master": "JACHQY000000000.1", "refseq_category": "na", "taxid": "2760084", "species_taxid": "2760084", "organism_name": "Stenotrophomonas lacuserhaii", "infraspecific_name": "strain=K32", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/09/15", "asm_name": "ASM1459629v1", "asm_submitter": "Institute of Medicinal Biotechnology Chinese Academy of Medical Sciences", "gbrs_paired_asm": "GCA_014596295.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/596/295/GCF_014596295.1_ASM1459629v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3984137", "genome_size_ungapped": "3984042", "gc_percent": "66.500000", "replicon_count": "0", "scaffold_count": "27", "contig_count": "27", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014596295.1-RS_2024_05_06", "annotation_date": "2024-05-06", "total_gene_count": "3594", "protein_coding_gene_count": "3488", "non_coding_gene_count": "71", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-09-15", "dateModified": "2020-09-15", "datePublished": "2020-09-15", "_annotation": { "sample_count": 1, "sample_organism": [ "Stenotrophomonas lacuserhaii" ], "sample_taxid": [ "2760084" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Yunnan, Erhai Lake" ], "sample_host_location_id": [], "data_size": "1.087 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3984137", "Number of Sequences": "27", "Longest Sequences (bp)": "772987", "N50 (bp)": "381161", "Gap Ratio (%)": "0.002384", "GCcontent (%)": "66.4", "Number of CDSs": "3539", "Average Protein Length": "336.5", "Coding Ratio (%)": "89.7", "Number of rRNAs": "4", "Number of tRNAs": "67", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Stenotrophomonas pennii", "strain": "strain=Sa5BUN4", "accession": "GCA_014836545.1", "taxid": 2762239, "species_taxid": 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