{
    "type": "genome",
    "identifier": "GCF_014634805.1",
    "organism": "Leuconostoc falkenbergense",
    "title": "Leuconostoc falkenbergense",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Northeast Agricultural University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_014634805.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00244137",
        "wgs_master": "BMBS00000000.1",
        "refseq_category": "na",
        "taxid": "2766470",
        "species_taxid": "2766470",
        "organism_name": "Leuconostoc falkenbergense",
        "infraspecific_name": "strain=LMG 10779",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/08/28",
        "asm_name": "ASM1463480v1",
        "asm_submitter": "Northeast Agricultural University",
        "gbrs_paired_asm": "GCA_014634805.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/634/805/GCF_014634805.1_ASM1463480v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "1963835",
        "genome_size_ungapped": "1963835",
        "gc_percent": "39.000000",
        "replicon_count": "0",
        "scaffold_count": "94",
        "contig_count": "94",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_014634805.1-RS_2024_08_26",
        "annotation_date": "2024-08-26",
        "total_gene_count": "2035",
        "protein_coding_gene_count": "1912",
        "non_coding_gene_count": "55",
        "pubmed_id": "33295855"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-08-28",
    "dateModified": "2020-08-28",
    "datePublished": "2020-08-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Leuconostoc falkenbergense"
        ],
        "sample_taxid": [
            "2766470"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Sweden"
        ],
        "sample_host_location_id": [],
        "data_size": "0.559 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "1963835",
        "Number of Sequences": "94",
        "Longest Sequences (bp)": "136710",
        "N50 (bp)": "39495",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "39.1",
        "Number of CDSs": "1956",
        "Average Protein Length": "291.4",
        "Coding Ratio (%)": "87.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "50",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Leuconostoc falkenbergense",
                "strain": "strain=LMG 10779",
                "accession": "GCA_014634805.1",
                "taxid": 2766470,
                "species_taxid": 2766470,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 604,
                "total_fragments": 607,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Leuconostoc pseudomesenteroides",
                "strain": "strain=NCDO 768",
                "accession": "GCA_012396745.1",
                "taxid": 33968,
                "species_taxid": 33968,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 92.6169,
                "matched_fragments": 519,
                "total_fragments": 607,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leuconostoc pseudomesenteroides",
                "strain": "strain=FDAARGOS_1003",
                "accession": "GCA_016127255.1",
                "taxid": 33968,
                "species_taxid": 33968,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 92.5358,
                "matched_fragments": 509,
                "total_fragments": 607,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leuconostoc pseudomesenteroides",
                "strain": "strain=LMG 11482",
                "accession": "GCA_014634745.1",
                "taxid": 33968,
                "species_taxid": 33968,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 92.488,
                "matched_fragments": 521,
                "total_fragments": 607,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leuconostoc mesenteroides subsp. jonggajibkimchii",
                "strain": "strain=DRC1506",
                "accession": "GCA_001886915.1",
                "taxid": 2026657,
                "species_taxid": 1245,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.5971,
                "matched_fragments": 201,
                "total_fragments": 607,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leuconostoc mesenteroides subsp. mesenteroides",
                "strain": "strain=NBRC 100496",
                "accession": "GCA_007990165.1",
                "taxid": 33967,
                "species_taxid": 1245,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.5644,
                "matched_fragments": 213,
                "total_fragments": 607,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leuconostoc kimchii",
                "strain": "strain=IMSNU 11154",
                "accession": "GCA_000092505.1",
                "taxid": 136609,
                "species_taxid": 136609,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.8764,
                "matched_fragments": 195,
                "total_fragments": 607,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leuconostoc gelidum subsp. gelidum",
                "strain": "strain=KCTC 3527",
                "accession": "GCA_000166715.2",
                "taxid": 1607839,
                "species_taxid": 1244,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.6074,
                "matched_fragments": 147,
                "total_fragments": 607,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leuconostoc rapi",
                "strain": "strain=DSM 27776",
                "accession": "GCA_016908715.1",
                "taxid": 1406906,
                "species_taxid": 1406906,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1689,
                "matched_fragments": 160,
                "total_fragments": 607,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leuconostoc gelidum subsp. gasicomitatum",
                "strain": "strain=NBRC 113245",
                "accession": "GCA_019655955.1",
                "taxid": 115778,
                "species_taxid": 1244,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1282,
                "matched_fragments": 157,
                "total_fragments": 607,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leuconostoc gelidum subsp. gasicomitatum",
                "strain": "strain=type strain: LMG 18811",
                "accession": "GCA_000196855.1",
                "taxid": 115778,
                "species_taxid": 1244,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9917,
                "matched_fragments": 156,
                "total_fragments": 607,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_014634805.1",
                "gtdb_species": "s__Leuconostoc falkenbergense",
                "ani": 100.0,
                "matched_fragments": 604,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.11",
                "min_intra_species_ani": "96.75",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 34,
                "status": "conclusive"
            },
            {
                "accession": "GCF_014634745.1",
                "gtdb_species": "s__Leuconostoc pseudomesenteroides",
                "ani": 92.4614,
                "matched_fragments": 522,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.98",
                "min_intra_species_ani": "96.85",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 11,
                "status": "-"
            },
            {
                "accession": "GCF_000014445.1",
                "gtdb_species": "s__Leuconostoc mesenteroides",
                "ani": 80.7991,
                "matched_fragments": 217,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.82",
                "min_intra_species_ani": "97.34",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 89,
                "status": "-"
            },
            {
                "accession": "GCF_009676745.1",
                "gtdb_species": "s__Leuconostoc mesenteroides_B",
                "ani": 80.5202,
                "matched_fragments": 213,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_001891125.1",
                "gtdb_species": "s__Leuconostoc suionicum",
                "ani": 80.4292,
                "matched_fragments": 229,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.16",
                "min_intra_species_ani": "97.05",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCF_008107645.1",
                "gtdb_species": "s__Leuconostoc litchii",
                "ani": 79.9644,
                "matched_fragments": 199,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000166735.2",
                "gtdb_species": "s__Leuconostoc inhae",
                "ani": 79.8634,
                "matched_fragments": 138,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.95",
                "min_intra_species_ani": "98.13",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 13,
                "status": "-"
            },
            {
                "accession": "GCF_000092505.1",
                "gtdb_species": "s__Leuconostoc kimchii",
                "ani": 79.8534,
                "matched_fragments": 195,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.55",
                "min_intra_species_ani": "99.53",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_000166715.1",
                "gtdb_species": "s__Leuconostoc gelidum",
                "ani": 79.6074,
                "matched_fragments": 147,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.91",
                "min_intra_species_ani": "98.75",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_014207505.1",
                "gtdb_species": "s__Leuconostoc carnosum",
                "ani": 79.6031,
                "matched_fragments": 148,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.31",
                "min_intra_species_ani": "98.70",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 17,
                "status": "-"
            },
            {
                "accession": "GCF_012396485.1",
                "gtdb_species": "s__Leuconostoc holzapfelii",
                "ani": 79.539,
                "matched_fragments": 148,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_016908715.1",
                "gtdb_species": "s__Leuconostoc rapi",
                "ani": 79.2278,
                "matched_fragments": 158,
                "total_fragments": 607,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.149,
        "cell_length": 0.058,
        "doubling_h": null,
        "growth_tmp": 28.666,
        "optimum_tmp": 23.338,
        "optimum_ph": 5.899,
        "genome_size": 1928488.79,
        "gc_content": 38.824,
        "coding_genes": 1785.127,
        "rRNA16S_genes": 4.0,
        "tRNA_genes": 67.495,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": 0.0,
        "facultative_respiration": 0.416,
        "anaerobic_respiration": 0.083,
        "aerobic_respiration": 0.5,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.09,
        "coccus_cell_shape": 0.636,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.181,
        "vibrio_cell_shape": 0.09,
        "spiral_cell_shape": 0.0
    },
    "_genome_taxon": [
        "Leuconostoc",
        "falkenbergense"
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}