{ "tc_result": [ { "organism_name": "Macrococcus hajekii", "strain": "strain=CCM 4809", "accession": "GCA_014634985.1", "taxid": 198482, "species_taxid": 198482, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 678, "total_fragments": 679, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Macrococcus hajekii", "strain": "strain=CCM4809", "accession": "GCA_004359505.1", "taxid": 198482, "species_taxid": 198482, "relation_to_type": "type", "validated": true, "ani": 99.9977, "matched_fragments": 675, "total_fragments": 679, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Macrococcus carouselicus", "strain": "strain=ATCC 51828", "accession": "GCA_004359515.1", "taxid": 69969, "species_taxid": 69969, "relation_to_type": "type", "validated": true, "ani": 80.3412, "matched_fragments": 375, "total_fragments": 679, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Macrococcus brunensis", "strain": "strain=CCM4811", "accession": "GCA_004359615.1", "taxid": 198483, "species_taxid": 198483, "relation_to_type": "type", "validated": true, "ani": 80.2932, "matched_fragments": 366, "total_fragments": 679, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Macrococcus bovicus", "strain": "strain=ATCC 51825", "accession": "GCA_004359575.1", "taxid": 69968, "species_taxid": 69968, "relation_to_type": "type", "validated": true, "ani": 79.9132, "matched_fragments": 343, "total_fragments": 679, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Macrococcus equipercicus", "strain": "strain=ATCC 51831", "accession": "GCA_004359525.2", "taxid": 69967, "species_taxid": 69967, "relation_to_type": "type", "validated": true, "ani": 79.3259, "matched_fragments": 204, "total_fragments": 679, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mammaliicoccus fleurettii", "strain": "strain=NCTC13829", "accession": "GCA_900458505.1", "taxid": 150056, "species_taxid": 150056, "relation_to_type": "type", "validated": true, "ani": 78.5813, "matched_fragments": 65, "total_fragments": 679, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Macrococcus lamae", "strain": "strain=CCM4815", "accession": "GCA_004359545.1", "taxid": 198484, "species_taxid": 198484, "relation_to_type": "type", "validated": true, "ani": 78.5613, "matched_fragments": 199, "total_fragments": 679, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mammaliicoccus sciuri", "strain": "strain=NCTC12103", "accession": "GCA_900474615.1", "taxid": 1296, "species_taxid": 1296, "relation_to_type": "type", "validated": true, "ani": 77.8778, "matched_fragments": 77, "total_fragments": 679, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Staphylococcus carnosus", "strain": "strain=FDAARGOS_883", "accession": "GCA_016028275.1", "taxid": 1281, "species_taxid": 1281, "relation_to_type": "type", "validated": true, "ani": 77.6147, "matched_fragments": 53, "total_fragments": 679, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mammaliicoccus sciuri", "strain": "strain=DSM 20345", "accession": "GCA_001046995.1", "taxid": 1296, "species_taxid": 1296, "relation_to_type": "type", "validated": true, "ani": 77.5827, "matched_fragments": 76, "total_fragments": 679, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_004359505.1", "gtdb_species": "s__Macrococcus hajekii", "ani": 99.9977, "matched_fragments": 675, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Macrococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_004359515.1", "gtdb_species": "s__Macrococcus carouselicus", "ani": 80.3398, "matched_fragments": 376, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Macrococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004359615.1", "gtdb_species": "s__Macrococcus brunensis", "ani": 80.2932, "matched_fragments": 366, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Macrococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004359575.1", "gtdb_species": "s__Macrococcus bovicus", "ani": 79.9132, "matched_fragments": 343, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Macrococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004359525.2", "gtdb_species": "s__Macrococcus equipercicus", "ani": 79.3259, "matched_fragments": 204, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Macrococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004117835.1", "gtdb_species": "s__Macrococcus_B sp004117835", "ani": 78.8104, "matched_fragments": 120, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Macrococcus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003970575.1", "gtdb_species": "s__Mammaliicoccus fleurettii", "ani": 78.585, "matched_fragments": 61, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Mammaliicoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.35", "min_intra_species_ani": "98.97", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.88", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_004359545.1", "gtdb_species": "s__Macrococcus lamae", "ani": 78.5613, "matched_fragments": 199, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Macrococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002438305.1", "gtdb_species": "s__Macrococcus sp002438305", "ani": 77.9373, "matched_fragments": 136, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Macrococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.53", "min_intra_species_ani": "98.53", "mean_intra_species_af": "0.76", "min_intra_species_af": "0.76", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002901825.1", "gtdb_species": "s__Mammaliicoccus sciuri", "ani": 77.8474, "matched_fragments": 75, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Mammaliicoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.65", "min_intra_species_ani": "95.60", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.84", "num_clustered_genomes": 216, "status": "-" }, { "accession": "GCF_006094395.1", "gtdb_species": "s__Staphylococcus haemolyticus", "ani": 77.8073, "matched_fragments": 52, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.59", "min_intra_species_ani": "96.62", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.87", "num_clustered_genomes": 385, "status": "-" }, { "accession": "GCF_002902285.1", "gtdb_species": "s__Staphylococcus simulans", "ani": 77.3647, "matched_fragments": 65, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.92", "min_intra_species_ani": "98.61", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.91", "num_clustered_genomes": 77, "status": "-" }, { "accession": "GCF_002902305.1", "gtdb_species": "s__Staphylococcus argensis", "ani": 77.1768, "matched_fragments": 50, "total_fragments": 679, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.94", "min_intra_species_ani": "99.94", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 8, "status": "-" } ] }