{ "tc_result": [ { "organism_name": "Nocardioides daphniae", "strain": "strain=CCM 7403", "accession": "GCA_014635145.1", "taxid": 402297, "species_taxid": 402297, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1177, "total_fragments": 1177, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Nocardioides daphniae", "strain": "strain=JCM 16608", "accession": "GCA_004777465.1", "taxid": 402297, "species_taxid": 402297, "relation_to_type": "type", "validated": true, "ani": 99.9391, "matched_fragments": 1176, "total_fragments": 1177, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Nocardioides jishulii", "strain": "strain=dk3136", "accession": "GCA_006007965.1", "taxid": 2575440, "species_taxid": 2575440, "relation_to_type": "type", "validated": true, "ani": 87.2981, "matched_fragments": 905, "total_fragments": 1177, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides malaquae", "strain": "strain=Y6", "accession": "GCA_015070385.1", "taxid": 2773426, "species_taxid": 2773426, "relation_to_type": "type", "validated": true, "ani": 84.4469, "matched_fragments": 782, "total_fragments": 1177, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides gilvus", "strain": "strain=XZ17", "accession": "GCA_003194605.1", "taxid": 1735589, "species_taxid": 1735589, "relation_to_type": "type", "validated": true, "ani": 82.378, "matched_fragments": 699, "total_fragments": 1177, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides yefusunii", "strain": "strain=HY056", "accession": "GCA_004014875.1", "taxid": 2500546, "species_taxid": 2500546, "relation_to_type": "type", "validated": true, "ani": 81.733, "matched_fragments": 604, "total_fragments": 1177, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides solisilvae", "strain": "strain=Ka25", "accession": "GCA_003194625.1", "taxid": 1542435, "species_taxid": 1542435, "relation_to_type": "type", "validated": true, "ani": 81.705, "matched_fragments": 685, "total_fragments": 1177, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides marinus", "strain": "strain=DSM 18248", "accession": "GCA_013408145.1", "taxid": 374514, "species_taxid": 374514, "relation_to_type": "type", "validated": true, "ani": 80.9144, "matched_fragments": 579, "total_fragments": 1177, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides lacusdianchii", "strain": "strain=JXJ CY 38", "accession": "GCA_020102855.1", "taxid": 2783664, "species_taxid": 2783664, "relation_to_type": "type", "validated": true, "ani": 80.8549, "matched_fragments": 648, "total_fragments": 1177, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides furvisabuli", "strain": "strain=JCM 13813", "accession": "GCA_021083185.1", "taxid": 375542, "species_taxid": 375542, "relation_to_type": "type", "validated": true, "ani": 80.7993, "matched_fragments": 617, "total_fragments": 1177, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides baculatus", "strain": "strain=G10", "accession": "GCA_016735675.1", "taxid": 2801337, "species_taxid": 2801337, "relation_to_type": "type", "validated": true, "ani": 80.6533, "matched_fragments": 593, "total_fragments": 1177, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides hwasunensis", "strain": "strain=19197", "accession": "GCA_014779665.1", "taxid": 397258, "species_taxid": 397258, "relation_to_type": "type", "validated": true, "ani": 80.5919, "matched_fragments": 606, "total_fragments": 1177, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides panaciterrulae", "strain": "strain=DSM 21350", "accession": "GCA_013409645.1", "taxid": 661492, "species_taxid": 661492, "relation_to_type": "type", "validated": true, "ani": 80.321, "matched_fragments": 582, "total_fragments": 1177, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_004777465.1", "gtdb_species": "s__Nocardioides daphniae", "ani": 99.9391, "matched_fragments": 1176, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.94", "min_intra_species_ani": "99.94", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_006007965.1", "gtdb_species": "s__Nocardioides sp006007965", "ani": 87.2866, "matched_fragments": 907, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003194605.1", "gtdb_species": "s__Nocardioides gilvus", "ani": 82.3552, "matched_fragments": 701, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004014875.1", "gtdb_species": "s__Nocardioides sp004014875", "ani": 81.6996, "matched_fragments": 606, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003194625.1", "gtdb_species": "s__Nocardioides solisilvae", "ani": 81.6869, "matched_fragments": 687, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013624435.2", "gtdb_species": "s__Nocardioides sp013624415", "ani": 81.4649, "matched_fragments": 671, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.04", "min_intra_species_ani": "99.04", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002865585.1", "gtdb_species": "s__Nocardioides houyundeii", "ani": 81.2488, "matched_fragments": 651, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.48", "min_intra_species_ani": "96.00", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003047295.1", "gtdb_species": "s__Nocardioides sediminis", "ani": 80.8786, "matched_fragments": 627, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016907435.1", "gtdb_species": "s__Nocardioides salarius", "ani": 80.7992, "matched_fragments": 630, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900105585.1", "gtdb_species": "s__Nocardioides exalbidus", "ani": 80.7334, "matched_fragments": 637, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001627335.1", "gtdb_species": "s__Nocardioides sp001627335", "ani": 80.5265, "matched_fragments": 519, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.38", "min_intra_species_ani": "96.50", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.88", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_015024225.1", "gtdb_species": "s__Nocardioides sp015024225", "ani": 80.3812, "matched_fragments": 602, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.48", 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"min_intra_species_ani": "98.92", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.95", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_013409645.1", "gtdb_species": "s__Nocardioides panaciterrulae", "ani": 80.3388, "matched_fragments": 581, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001653335.1", "gtdb_species": "s__Nocardioides dokdonensis", "ani": 80.2516, "matched_fragments": 611, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004919105.1", "gtdb_species": "s__Nocardioides sp004919105", "ani": 79.9715, "matched_fragments": 563, "total_fragments": 1177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }