{ "tc_result": [ { "organism_name": "Microbacterium murale", "strain": "strain=CCM 7640", "accession": "GCA_014635185.1", "taxid": 1081040, "species_taxid": 1081040, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1290, "total_fragments": 1291, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Microbacterium profundi", "strain": "strain=Shh49", "accession": "GCA_000763375.1", "taxid": 450380, "species_taxid": 450380, "relation_to_type": "type", "validated": true, "ani": 90.9144, "matched_fragments": 868, "total_fragments": 1291, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium aerolatum", "strain": "strain=NBRC 103071", "accession": "GCA_007988825.1", "taxid": 153731, "species_taxid": 153731, "relation_to_type": "type", "validated": true, "ani": 83.2831, "matched_fragments": 779, "total_fragments": 1291, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium 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"accession": "GCA_006539765.1", "taxid": 33918, "species_taxid": 33918, "relation_to_type": "type", "validated": true, "ani": 81.353, "matched_fragments": 613, "total_fragments": 1291, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium liquefaciens", "strain": "strain=JCM 3879", "accession": "GCA_014648755.1", "taxid": 33918, "species_taxid": 33918, "relation_to_type": "type", "validated": true, "ani": 81.3294, "matched_fragments": 619, "total_fragments": 1291, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium saperdae", "strain": "strain=DSM 20169", "accession": "GCA_006716345.1", "taxid": 69368, "species_taxid": 69368, "relation_to_type": "type", "validated": true, "ani": 81.3269, "matched_fragments": 651, "total_fragments": 1291, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium foliorum", "strain": "strain=NRRL B-24224", "accession": "GCA_003367705.1", "taxid": 104336, "species_taxid": 104336, "relation_to_type": "suspected-type", "validated": true, "ani": 81.2337, "matched_fragments": 641, "total_fragments": 1291, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium bovistercoris", "strain": "strain=NEAU-LLE", "accession": "GCA_003387575.1", "taxid": 2293570, "species_taxid": 2293570, "relation_to_type": "type", "validated": true, "ani": 80.771, "matched_fragments": 593, "total_fragments": 1291, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium gallinarum", "strain": "strain=Sa1CUA4", "accession": "GCA_014837165.1", "taxid": 2762209, "species_taxid": 2762209, "relation_to_type": "type", "validated": true, "ani": 79.8124, "matched_fragments": 464, "total_fragments": 1291, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium oryzae", "strain": "strain=MB-10", "accession": "GCA_009735645.1", "taxid": 743009, "species_taxid": 743009, "relation_to_type": "type", "validated": true, "ani": 79.682, "matched_fragments": 381, "total_fragments": 1291, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium pullorum", "strain": "strain=Sa4CUA7", "accession": "GCA_014836535.1", "taxid": 2762236, "species_taxid": 2762236, "relation_to_type": "type", "validated": true, "ani": 79.3295, "matched_fragments": 453, "total_fragments": 1291, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium yannicii", "strain": "strain=DSM 23203", "accession": "GCA_024055635.1", "taxid": 671622, "species_taxid": 671622, "relation_to_type": "type", "validated": true, "ani": 79.1946, "matched_fragments": 489, "total_fragments": 1291, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014635185.1", "gtdb_species": "s__Microbacterium murale", "ani": 100.0, "matched_fragments": 1290, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_000763375.1", "gtdb_species": "s__Microbacterium profundi", "ani": 90.8947, "matched_fragments": 869, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.00", "min_intra_species_ani": "98.00", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_015277895.1", "gtdb_species": "s__Microbacterium sp015277895", "ani": 83.4381, 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674, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.21", "min_intra_species_ani": "98.43", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000685355.1", "gtdb_species": "s__Microbacterium sp000685355", "ani": 81.6947, "matched_fragments": 645, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002979655.1", "gtdb_species": "s__Microbacterium sp002979655", "ani": 81.4365, "matched_fragments": 656, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.69", "min_intra_species_ani": "97.67", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_011752045.1", "gtdb_species": "s__Microbacterium sp001639925", "ani": 81.4213, "matched_fragments": 629, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.61", "min_intra_species_ani": "99.21", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.97", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_002872075.1", "gtdb_species": "s__Microbacterium kitamiense", "ani": 81.4202, "matched_fragments": 646, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006716345.1", "gtdb_species": "s__Microbacterium saperdae", "ani": 81.3407, "matched_fragments": 649, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003610275.1", "gtdb_species": "s__Microbacterium ginsengiterrae_A", "ani": 81.3208, "matched_fragments": 688, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003367705.1", "gtdb_species": "s__Microbacterium foliorum", "ani": 81.236, "matched_fragments": 640, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004216995.1", "gtdb_species": "s__Microbacterium sp004216995", "ani": 81.2016, "matched_fragments": 669, "total_fragments": 1291, "gtdb_taxonomy": 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"d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003524435.1", "gtdb_species": "s__Microbacterium sp003524435", "ani": 80.3829, "matched_fragments": 487, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_902506375.1", "gtdb_species": "s__Microbacterium sp902506375", "ani": 80.3748, "matched_fragments": 558, "total_fragments": 1291, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }