{ "tc_result": [ { "organism_name": "Corynebacterium pelargi", "strain": "strain=CCM 8517", "accession": "GCA_014635485.1", "taxid": 1471400, "species_taxid": 1471400, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 778, "total_fragments": 778, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium pelargi", "strain": "strain=136/3", "accession": "GCA_004114895.1", "taxid": 1471400, "species_taxid": 1471400, "relation_to_type": "type", "validated": true, "ani": 99.9955, "matched_fragments": 778, "total_fragments": 778, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium pseudopelargi", "strain": "strain=812CH", "accession": "GCA_003814005.1", "taxid": 2080757, "species_taxid": 2080757, "relation_to_type": "type", "validated": true, "ani": 89.6674, "matched_fragments": 704, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium gerontici", "strain": "strain=W8", "accession": "GCA_003813985.1", "taxid": 2079234, "species_taxid": 2079234, "relation_to_type": "type", "validated": true, "ani": 81.8919, "matched_fragments": 435, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium vitaeruminis", "strain": "strain=DSM 20294", "accession": "GCA_000550805.1", "taxid": 38305, "species_taxid": 38305, "relation_to_type": "type", "validated": true, "ani": 78.6164, "matched_fragments": 197, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium diphtheriae", "strain": "strain=DSM 44123", "accession": "GCA_001913265.1", "taxid": 1717, "species_taxid": 1717, "relation_to_type": "type", "validated": true, "ani": 77.9669, "matched_fragments": 117, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium efficiens", "strain": "strain=YS-314", "accession": "GCA_000011305.1", "taxid": 152794, "species_taxid": 152794, "relation_to_type": "type", "validated": true, "ani": 77.8519, "matched_fragments": 155, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium efficiens", "strain": "strain=YS-314", "accession": "GCA_000160795.1", "taxid": 152794, "species_taxid": 152794, "relation_to_type": "type", "validated": true, "ani": 77.7678, "matched_fragments": 158, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium pollutisoli", "strain": "strain=VDS11", "accession": "GCA_900177745.1", "taxid": 1610489, "species_taxid": 1610489, "relation_to_type": "type", "validated": true, "ani": 77.7177, "matched_fragments": 144, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium ureicelerivorans", "strain": "strain=IMMIB RIV-2301", "accession": "GCA_000747315.1", "taxid": 401472, "species_taxid": 401472, "relation_to_type": "type", "validated": true, "ani": 77.3298, "matched_fragments": 108, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium mucifaciens", "strain": "strain=ATCC 700355", "accession": "GCA_012396315.1", "taxid": 57171, "species_taxid": 57171, "relation_to_type": "type", "validated": true, "ani": 77.2991, "matched_fragments": 105, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium resistens", "strain": "strain=DSM 45100", "accession": "GCA_000177535.2", "taxid": 258224, "species_taxid": 258224, "relation_to_type": "type", "validated": true, "ani": 76.7529, "matched_fragments": 82, "total_fragments": 778, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.54, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_004114895.1", "gtdb_species": "s__Corynebacterium pelargi", "ani": 99.9955, "matched_fragments": 778, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_003814005.1", "gtdb_species": "s__Corynebacterium pseudopelargi", "ani": 89.6674, "matched_fragments": 704, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003813985.1", "gtdb_species": "s__Corynebacterium geronticis", "ani": 81.8919, "matched_fragments": 435, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000550805.1", "gtdb_species": "s__Corynebacterium vitaeruminis", "ani": 78.6256, "matched_fragments": 196, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.86", "min_intra_species_ani": "98.60", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_902702935.1", "gtdb_species": "s__Corynebacterium rouxii", "ani": 78.3538, "matched_fragments": 119, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001457455.1", "gtdb_species": "s__Corynebacterium diphtheriae", "ani": 78.0818, "matched_fragments": 117, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.05", "min_intra_species_ani": "95.03", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.83", "num_clustered_genomes": 346, "status": "-" }, { "accession": "GCA_019209905.1", "gtdb_species": "s__Corynebacterium sp019209905", "ani": 77.9484, "matched_fragments": 87, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000011305.1", "gtdb_species": "s__Corynebacterium efficiens", "ani": 77.8519, "matched_fragments": 155, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.90", "min_intra_species_ani": "99.90", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900177745.1", "gtdb_species": "s__Corynebacterium pollutisoli", "ani": 77.7177, "matched_fragments": 144, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.83", "min_intra_species_ani": "98.83", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900155535.1", "gtdb_species": "s__Corynebacterium urinipleomorphum", "ani": 77.5874, "matched_fragments": 97, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001021025.1", "gtdb_species": "s__Corynebacterium epidermidicanis", "ani": 77.5553, "matched_fragments": 117, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014490555.1", "gtdb_species": "s__Corynebacterium sp014490555", "ani": 77.4372, "matched_fragments": 113, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "0.99", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001831515.1", "gtdb_species": "s__Corynebacterium sp001831515", "ani": 77.4042, "matched_fragments": 120, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.57", "min_intra_species_ani": "96.57", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_012396315.1", "gtdb_species": "s__Corynebacterium mucifaciens", "ani": 77.2991, "matched_fragments": 105, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.74", "min_intra_species_ani": "95.74", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000177535.2", "gtdb_species": "s__Corynebacterium resistens", "ani": 76.7529, "matched_fragments": 82, "total_fragments": 778, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }