{ "tc_result": [ { "organism_name": "Enterococcus alcedinis", "strain": "strain=CCM 8433", "accession": "GCA_014635985.1", "taxid": 1274384, "species_taxid": 1274384, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 881, "total_fragments": 882, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Enterococcus aquimarinus", "strain": "strain=DSM 17690", "accession": "GCA_001885765.1", "taxid": 328396, "species_taxid": 328396, "relation_to_type": "type", "validated": true, "ani": 78.911, "matched_fragments": 290, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus saccharolyticus", "strain": "strain=DSM 20726", "accession": "GCA_001886235.1", "taxid": 41997, "species_taxid": 41997, "relation_to_type": "type", "validated": true, "ani": 78.3068, "matched_fragments": 186, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus saccharolyticus subsp. saccharolyticus", "strain": "strain=ATCC 43076", "accession": "GCA_000407005.1", "taxid": 1814218, "species_taxid": 41997, "relation_to_type": "type", "validated": true, "ani": 78.2637, "matched_fragments": 190, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus saccharolyticus subsp. saccharolyticus", "strain": "strain=ATCC 43076", "accession": "GCA_000407285.1", "taxid": 1814218, "species_taxid": 41997, "relation_to_type": "type", "validated": true, "ani": 78.173, "matched_fragments": 183, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus sulfureus", "strain": "strain=ATCC 49903", "accession": "GCA_000407025.1", "taxid": 1356, "species_taxid": 1356, "relation_to_type": "type", "validated": true, "ani": 78.0697, "matched_fragments": 115, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus mediterraneensis", "strain": "strain=Marseille-P4358", "accession": "GCA_900604485.1", "taxid": 2364791, "species_taxid": 2364791, "relation_to_type": "type", "validated": true, "ani": 77.846, "matched_fragments": 76, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus thailandicus", "strain": "strain=NBRC 101867", "accession": "GCA_007989705.1", "taxid": 417368, "species_taxid": 417368, "relation_to_type": "type", "validated": true, "ani": 77.8305, "matched_fragments": 103, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus thailandicus", "strain": "strain=DSM 21767", "accession": "GCA_001886265.1", "taxid": 417368, "species_taxid": 417368, "relation_to_type": "type", "validated": true, "ani": 77.7677, "matched_fragments": 101, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus silesiacus", "strain": "strain=DSM 22801", "accession": "GCA_001886225.1", "taxid": 332949, "species_taxid": 332949, "relation_to_type": "type", "validated": true, "ani": 77.728, "matched_fragments": 89, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus faecalis", "strain": "strain=ATCC 19433", "accession": "GCA_000392875.1", "taxid": 1351, "species_taxid": 1351, "relation_to_type": "type", "validated": true, "ani": 77.6578, "matched_fragments": 106, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus crotali", "strain": "strain=ETRF1", "accession": "GCA_000633635.1", "taxid": 1453587, "species_taxid": 1453587, "relation_to_type": "type", "validated": true, "ani": 77.6511, "matched_fragments": 98, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus faecalis", "strain": "strain=NBRC 100480", "accession": "GCA_001544235.1", "taxid": 1351, "species_taxid": 1351, "relation_to_type": "type", "validated": true, "ani": 77.6489, "matched_fragments": 109, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus rivorum", "strain": "strain=LMG 25899", "accession": "GCA_001742285.1", "taxid": 762845, "species_taxid": 762845, "relation_to_type": "type", "validated": true, "ani": 77.6041, "matched_fragments": 85, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus haemoperoxidus", "strain": "strain=ATCC BAA-382", "accession": "GCA_000407165.1", "taxid": 155618, "species_taxid": 155618, "relation_to_type": "type", "validated": true, "ani": 77.5617, "matched_fragments": 100, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus haemoperoxidus", "strain": "strain=ATCC BAA-382", "accession": "GCA_000393995.1", "taxid": 155618, "species_taxid": 155618, "relation_to_type": "type", "validated": true, "ani": 77.5264, "matched_fragments": 100, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus plantarum", "strain": "strain=LMG 26214", "accession": "GCA_001730295.1", "taxid": 1077675, "species_taxid": 1077675, "relation_to_type": "type", "validated": true, "ani": 77.4395, "matched_fragments": 93, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus mundtii", "strain": "strain=DSM 4838", "accession": "GCA_002813755.1", "taxid": 53346, "species_taxid": 53346, "relation_to_type": "type", "validated": true, "ani": 77.3767, "matched_fragments": 95, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus salmoninarum", "strain": "strain=NCFB 2777", "accession": "GCA_003987495.1", "taxid": 2739, "species_taxid": 2739, "relation_to_type": "type", "validated": true, "ani": 77.1621, "matched_fragments": 66, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus xieshaowenii", "strain": "strain=personal::cf-49", "accession": "GCA_004792515.1", "taxid": 2562451, "species_taxid": 2562451, "relation_to_type": "type", "validated": true, "ani": 76.9993, "matched_fragments": 72, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus ratti", "strain": "strain=DSM 15687", "accession": "GCA_001886195.1", "taxid": 150033, "species_taxid": 150033, "relation_to_type": "type", "validated": true, "ani": 76.8395, "matched_fragments": 75, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus alishanensis", "strain": "strain=ALS3", "accession": "GCA_019218635.1", "taxid": 1303817, "species_taxid": 1303817, "relation_to_type": "type", "validated": true, "ani": 76.8326, "matched_fragments": 93, "total_fragments": 882, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014635985.1", "gtdb_species": "s__Enterococcus_I alcedinis", "ani": 100.0, "matched_fragments": 881, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_I", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCA_019116505.1", "gtdb_species": "s__Enterococcus_I avicola", "ani": 82.3882, "matched_fragments": 377, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_I", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001885765.1", "gtdb_species": "s__Enterococcus_I aquimarinus", "ani": 78.911, "matched_fragments": 290, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_I", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.10", "min_intra_species_ani": "98.04", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.95", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_016909125.1", "gtdb_species": "s__Enterococcus_I lemanii", "ani": 78.5934, "matched_fragments": 268, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_I", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.21", "min_intra_species_ani": "98.21", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000407285.1", "gtdb_species": "s__Enterococcus_F saccharolyticus", "ani": 78.1476, "matched_fragments": 185, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_F", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_017426705.1", "gtdb_species": "s__Enterococcus_F sp017426705", "ani": 78.1471, "matched_fragments": 194, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_F", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000407605.1", "gtdb_species": "s__Enterococcus_G sulfureus", "ani": 78.0074, "matched_fragments": 114, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_G", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900604485.1", "gtdb_species": "s__Enterococcus_C mediterraneensis", "ani": 77.846, "matched_fragments": 76, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009933335.1", "gtdb_species": "s__Enterococcus_F sp009933335", "ani": 77.8416, "matched_fragments": 187, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_F", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001465115.1", "gtdb_species": "s__Enterococcus silesiacus", "ani": 77.8301, "matched_fragments": 85, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001886265.1", "gtdb_species": "s__Enterococcus_B thailandicus", "ani": 77.7677, "matched_fragments": 101, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.46", "min_intra_species_ani": "99.20", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_000407445.1", "gtdb_species": "s__Enterococcus moraviensis", "ani": 77.7536, "matched_fragments": 103, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_005405265.1", "gtdb_species": "s__Enterococcus_C songbeiensis", "ani": 77.626, "matched_fragments": 75, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.82", "min_intra_species_ani": "98.68", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_002174455.1", "gtdb_species": "s__Enterococcus sp002174455", "ani": 77.5422, "matched_fragments": 84, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.86", "min_intra_species_ani": "99.86", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001730295.1", "gtdb_species": "s__Enterococcus plantarum", "ani": 77.4395, "matched_fragments": 93, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.57", "min_intra_species_ani": "98.46", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.88", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_002148425.1", "gtdb_species": "s__Enterococcus sp002148425", "ani": 77.2682, "matched_fragments": 100, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.91", "min_intra_species_ani": "98.88", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_019115705.1", "gtdb_species": "s__Tetragenococcus pullicola", "ani": 77.1495, "matched_fragments": 77, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Tetragenococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001886195.1", "gtdb_species": "s__Enterococcus_B ratti", "ani": 76.8381, "matched_fragments": 74, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_019218635.1", "gtdb_species": "s__Enterococcus_A sp019218635", "ani": 76.8063, "matched_fragments": 94, "total_fragments": 882, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }