{ "tc_result": [ { "organism_name": "Silvibacterium dinghuense", "strain": "strain=CGMCC 1.13007", "accession": "GCA_014640355.1", "taxid": 1560006, "species_taxid": 1560006, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1700, "total_fragments": 1700, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Silvibacterium dinghuense", "strain": "strain=DHOF10", "accession": "GCA_004123295.1", "taxid": 1560006, "species_taxid": 1560006, "relation_to_type": "type", "validated": true, "ani": 99.9989, "matched_fragments": 1699, "total_fragments": 1700, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Silvibacterium bohemicum", "strain": "strain=S15", "accession": "GCA_001006305.1", "taxid": 1577686, "species_taxid": 1577686, "relation_to_type": "type", "validated": true, "ani": 78.4103, "matched_fragments": 565, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Silvibacterium bohemicum", "strain": "strain=DSM 103733", "accession": "GCA_014201455.1", "taxid": 1577686, "species_taxid": 1577686, "relation_to_type": "type", "validated": true, "ani": 78.3778, "matched_fragments": 561, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracidobacterium acidisoli", "strain": "strain=4G-K13", "accession": "GCA_003428625.2", "taxid": 2303751, "species_taxid": 2303751, "relation_to_type": "type", "validated": true, "ani": 77.931, "matched_fragments": 365, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidobacterium capsulatum", "strain": "strain=ATCC 51196", "accession": "GCA_000022565.1", "taxid": 33075, "species_taxid": 33075, "relation_to_type": "type", "validated": true, "ani": 77.7876, "matched_fragments": 300, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alloacidobacterium dinghuense", "strain": "strain=4Y35", "accession": "GCA_014274465.1", "taxid": 2763107, "species_taxid": 2763107, "relation_to_type": "type", "validated": true, "ani": 77.2579, "matched_fragments": 228, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Granulicella rosea", "strain": "strain=DSM 18704", "accession": "GCA_900188085.1", "taxid": 474952, "species_taxid": 474952, "relation_to_type": "type", "validated": true, "ani": 77.253, "matched_fragments": 262, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Granulicella mallensis", "strain": "strain=MP5ACTX8", "accession": "GCA_000178955.2", "taxid": 940614, "species_taxid": 940614, "relation_to_type": "type", "validated": true, "ani": 76.9413, "matched_fragments": 231, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Granulicella pectinivorans", "strain": "strain=DSM 21001", "accession": "GCA_900114625.1", "taxid": 474950, "species_taxid": 474950, "relation_to_type": "type", "validated": true, "ani": 76.8309, "matched_fragments": 194, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas carbonaria", "strain": "strain=CIP 111764", "accession": "GCA_904061905.1", "taxid": 2762745, "species_taxid": 2762745, "relation_to_type": "type", "validated": true, "ani": 75.15, "matched_fragments": 64, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_004123295.1", "gtdb_species": "s__Silvibacterium dinghuense", "ani": 99.9989, "matched_fragments": 1699, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Silvibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_001006305.1", "gtdb_species": "s__Silvibacterium bohemicum", "ani": 78.3834, "matched_fragments": 569, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Silvibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003428625.2", "gtdb_species": "s__Palsa-343 sp003428625", "ani": 77.9214, "matched_fragments": 366, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Palsa-343", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000022565.1", "gtdb_species": "s__Acidobacterium capsulatum", "ani": 77.801, "matched_fragments": 298, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Acidobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_011333575.1", "gtdb_species": "s__Acidobacterium capsulatum_A", "ani": 77.7356, "matched_fragments": 255, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Acidobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013285705.1", "gtdb_species": "s__Acidobacterium_A sp013285705", "ani": 77.7126, "matched_fragments": 156, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Acidobacterium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009765985.1", "gtdb_species": "s__Acidobacterium_A sp009765985", "ani": 77.3891, "matched_fragments": 254, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Acidobacterium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014274465.1", "gtdb_species": "s__Acidobacterium_A sp014274465", "ani": 77.2579, "matched_fragments": 228, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Acidobacterium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013289875.1", "gtdb_species": "s__Silvibacterium sp013289875", "ani": 77.2411, "matched_fragments": 268, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Silvibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900188085.1", "gtdb_species": "s__Granulicella_C rosea", "ani": 77.1943, "matched_fragments": 262, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Granulicella_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019234945.1", "gtdb_species": "s__Silvibacterium sp019234945", "ani": 77.0336, "matched_fragments": 207, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Silvibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000178955.2", "gtdb_species": "s__Granulicella_A mallensis", "ani": 76.9512, "matched_fragments": 231, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Granulicella_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900114625.1", "gtdb_species": "s__Granulicella_C pectinivorans", "ani": 76.8329, "matched_fragments": 194, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Granulicella_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_015655315.1", "gtdb_species": "s__Acidobacterium_A sp015655315", "ani": 76.6081, "matched_fragments": 194, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Acidobacterium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009781125.1", "gtdb_species": "s__Edaphobacter sp009781125", "ani": 76.4654, "matched_fragments": 101, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Edaphobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903828675.1", "gtdb_species": "s__Terracidiphilus sp903828675", "ani": 76.2211, "matched_fragments": 150, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Terracidiphilus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.87", "min_intra_species_ani": "99.75", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.93", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_019236695.1", "gtdb_species": "s__JAFAIN01 sp019236695", "ani": 75.7649, "matched_fragments": 51, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__CAINCZ01;g__JAFAIN01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_904061905.1", "gtdb_species": "s__Pseudomonas_E carbonaria", "ani": 75.1601, "matched_fragments": 63, "total_fragments": 1700, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }