# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_40	LOCUS_00390	sequence01:41657..41977(-)	frameshift,internal_stop_codon	41981..41983(-)	41987	WP_012775453.1	hypothetical protein	92.5	80.3	34.7
MGA_55	LOCUS_00540	sequence01:61858..62919(-)	partial			WP_001233696.1	DUF4097 domain-containing protein	68.0	72.9	22.0
MGA_56	LOCUS_00550	sequence01:62916..63512(-)	partial			WP_011837698.1	DUF1700 domain-containing protein	71.7	71.9	42.0
MGA_76	LOCUS_00750	sequence01:86576..86956(-)	partial			WP_011836996.1	class A sortase	98.4	49.4	47.6
MGA_160	LOCUS_01590	sequence02:4892..9589(-)	partial			WP_012775593.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	33.2	24.7	26.8
MGA_185	LOCUS_01840	sequence02:33194..33430(+)	frameshift,internal_stop_codon	33066..33068(+)	32936	WP_093649644.1	ISL3 family transposase	79.5	9.8	71.0
MGA_193	LOCUS_01910	sequence02:41563..41895(-)	partial			WP_001069291.1	preprotein translocase subunit YajC	72.7	80.8	70.0
MGA_207	LOCUS_02050	sequence02:60037..60462(-)	partial			WP_000720788.1	CPBP family intramembrane metalloprotease	91.5	58.4	39.5
MGA_213	LOCUS_02110	sequence02:63752..64486(-)	frameshift		64533	WP_000572848.1	XRE/MutR family transcriptional regulator	98.0	83.6	57.9
MGA_221	LOCUS_02190	sequence02:77062..78210(-)	partial			WP_038431655.1	hypothetical protein	39.8	27.8	32.7
MGA_234	LOCUS_02320	sequence02:91081..91290(-)	frameshift		91505	WP_012775157.1	IS200/IS605-like element ISSsu4 family transposase	94.2	42.2	80.0
MGA_242	LOCUS_02400	sequence02:99149..100012(-)	partial			WP_001865283.1	glycosyltransferase family 8 protein	96.2	62.7	34.3
MGA_243	LOCUS_02410	sequence02:100068..100946(-)	partial			WP_000528551.1	glycosyltransferase	85.3	61.6	37.3
MGA_252	LOCUS_02500	sequence02:109238..109471(-)	partial			WP_158181852.1	LLM class flavin-dependent oxidoreductase	98.7	21.1	65.8
MGA_264	LOCUS_02620	sequence02:119661..119798(-)	partial			WP_000831905.1	50S ribosomal protein L34	57.8	59.1	92.3
MGA_275	LOCUS_02730	sequence02:132683..134314(-)	partial			WP_018307053.1	helix-turn-helix domain-containing protein	50.5	67.8	24.9
MGA_279	LOCUS_02770	sequence02:137818..138798(+)	partial			WP_011391569.1	phosphoglycerate dehydrogenase	76.7	47.4	37.2
MGA_280	LOCUS_02780	sequence02:139105..139791(+)	frameshift		139749	WP_100190734.1	IS3 family transposase	96.1	42.0	70.3
MGA_281	LOCUS_02790	sequence02:139959..140441(+)	frameshift		139749	WP_100190734.1	IS3 family transposase	94.4	29.3	76.5
MGA_282	LOCUS_02800	sequence02:140485..140817(+)	frameshift,internal_stop_codon	140434..140436(+)	140793	WP_012775212.1	ISL3 family transposase	97.3	25.6	88.8
MGA_307	LOCUS_03050	sequence03:27121..28107(-)	partial			WP_011028384.1	excalibur calcium-binding domain-containing protein	15.2	31.8	50.0
MGA_309	LOCUS_03070	sequence03:29686..30012(+)	partial			WP_001279278.1	helix-turn-helix transcriptional regulator	57.4	52.1	45.2
MGA_319	LOCUS_03170	sequence03:40851..41006(-)	partial			WP_000502594.1	hypothetical protein	56.9	55.8	96.6
MGA_341	LOCUS_03390	sequence03:66388..67035(-)	partial			WP_150880979.1	ISL3 family transposase	99.5	52.5	61.7
MGA_388	LOCUS_03850	sequence04:12745..13086(-)	partial			WP_010932831.1	N-6 DNA methylase	76.1	40.2	47.7
MGA_423	LOCUS_04200	sequence04:49044..49772(-)	partial			WP_010922095.1	glucosaminidase domain-containing protein	99.6	60.8	71.2
MGA_429	LOCUS_04260	sequence04:52934..56770(-)	partial			WP_093649511.1	phage tail spike protein	56.2	64.4	52.4
MGA_431	LOCUS_04280	sequence04:58270..61983(-)	partial			WP_010922222.1	tape measure protein	33.3	37.9	36.8
MGA_450	LOCUS_04470	sequence04:73229..74326(-)	partial			WP_002399577.1	DNA modification methylase	37.8	36.0	48.3
MGA_455	LOCUS_04520	sequence04:75773..75952(-)	frameshift		75951	WP_005793656.1	site-specific DNA-methyltransferase	100.0	23.5	66.1
MGA_456	LOCUS_04530	sequence04:75949..76521(-)	frameshift		75951	WP_005793656.1	site-specific DNA-methyltransferase	98.4	74.5	58.8
MGA_463	LOCUS_04600	sequence04:79327..80034(-)	partial			WP_012047604.1	ERF family protein	56.2	72.0	59.8
MGA_473	LOCUS_04700	sequence04:84009..84728(+)	partial			WP_002993300.1	S24 family peptidase	66.1	68.5	55.3
MGA_504	LOCUS_05000	sequence05:17588..19057(-)	partial			WP_010922095.1	glucosaminidase domain-containing protein	18.6	22.5	37.4
MGA_508	LOCUS_05040	sequence05:20031..24449(-)	partial			WP_001880132.1	phage tail spike protein	37.2	41.1	45.4
MGA_518	LOCUS_05140	sequence05:31985..32680(-)	partial			WP_011475651.1	Clp protease ClpP	77.5	74.5	43.0
MGA_527	LOCUS_05230	sequence05:37659..37862(-)	partial			WP_049753987.1	DUF4314 domain-containing protein	88.1	24.9	49.2
MGA_530	LOCUS_05260	sequence05:38680..39357(-)	partial			WP_011922470.1	DNA (cytosine-5-)-methyltransferase	68.9	48.1	44.2
MGA_531	LOCUS_05270	sequence05:39363..39932(-)	frameshift		39656	WP_011861009.1	DNA cytosine methyltransferase	54.0	28.9	54.4
MGA_539	LOCUS_05350	sequence05:45549..45830(-)	partial			WP_010714182.1	VRR-NUC domain-containing protein	81.7	70.8	39.5
MGA_540	LOCUS_05360	sequence05:46115..48400(-)	partial			WP_013531683.1	phage/plasmid primase, P4 family	44.3	74.1	32.1
MGA_546	LOCUS_05420	sequence05:53360..53902(+)	partial			WP_002399687.1	DNA polymerase	99.4	27.9	41.0
MGA_553	LOCUS_05490	sequence05:60367..63087(-)	partial			WP_006037763.1	RHS repeat-associated core domain-containing protein	44.8	22.5	25.3
MGA_559	LOCUS_05550	sequence05:68437..68976(+)	frameshift		68802	WP_000490976.1	XRE family transcriptional regulator	67.6	51.3	49.6
MGA_560	LOCUS_05560	sequence05:68889..69134(+)	frameshift		68802	WP_012775539.1	XRE family transcriptional regulator	100.0	35.2	61.7
MGA_563	LOCUS_05590	sequence05:69552..69842(+)	frameshift		69827	WP_088197863.1	IS3-like element ISSag2 family transposase	97.9	25.5	83.0
MGA_564	LOCUS_05600	sequence05:69878..70657(+)	frameshift		69827	WP_088197863.1	IS3-like element ISSag2 family transposase	98.8	69.6	80.5
MGA_566	LOCUS_05620	sequence05:71069..72184(-)	partial			WP_041272556.1	recombinase family protein	89.5	60.3	41.2
MGA_576	LOCUS_05710	sequence06:7334..17071(+)	partial			WP_147628756.1	MucBP domain-containing protein	59.3	58.0	26.3
MGA_586	LOCUS_05810	sequence06:30793..40581(+)	partial			WP_011101486.1	KxYKxGKxW signal peptide domain-containing protein	25.7	33.9	29.1
MGA_602	LOCUS_05970	sequence06:53374..53808(+)	partial			WP_011837153.1	GNAT family N-acetyltransferase	62.5	64.1	42.9
MGA_620	LOCUS_06130	sequence07:399..605(+)	partial			WP_000691850.1	hypothetical protein	67.6	71.9	67.4
MGA_621	LOCUS_06140	sequence07:577..1311(+)	frameshift		1467	WP_068990772.1	IS66-like element short variant transposase	98.8	53.6	95.0
MGA_622	LOCUS_06150	sequence07:1506..1832(+)	frameshift,internal_stop_codon	1804..1806(+),1852..1854(+)	1800,1467	WP_068990772.1	IS66-like element short variant transposase	90.7	21.8	93.9
MGA_623	LOCUS_06160	sequence07:1859..2062(+)	frameshift,internal_stop_codon	1803..1805(+),1851..1853(+)	1799	WP_068990772.1	IS66-like element short variant transposase	100.0	14.9	94.0
MGA_624	LOCUS_06170	sequence07:2480..9739(+)	partial			WP_011836870.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	81.3	65.7	37.9
MGA_644	LOCUS_06370	sequence07:27367..28533(+)	partial			WP_011837183.1	ABC transporter ATP-binding protein	73.2	69.3	66.9
MGA_647	LOCUS_06400	sequence07:31024..32001(+)	partial			WP_011267456.1	glycosyltransferase	70.5	69.8	29.7
MGA_672	LOCUS_06640	sequence07:52794..53003(+)	frameshift		52666	WP_012775159.1	phosphate ABC transporter substrate-binding protein PstS family protein	98.6	23.5	73.5
MGA_680	LOCUS_06720	sequence07:60027..60431(-)	partial			WP_000073946.1	hypothetical protein	64.2	57.2	38.9
MGA_750	LOCUS_07420	sequence08:61697..62338(+)	partial			WP_167493974.1	antibiotic biosynthesis monooxygenase	77.9	72.3	29.2
MGA_761	LOCUS_07530	sequence09:5670..5981(+)	partial			WP_004194153.1	DNA-directed RNA polymerase subunit omega	62.1	61.5	96.9
MGA_779	LOCUS_07710	sequence09:25519..25977(-)	internal_stop_codon	26092..26094(-)		WP_000434947.1	quorum-sensing system transcriptional regulator Rgg	91.4	49.1	46.0
MGA_780	LOCUS_07720	sequence09:26092..26385(-)	internal_stop_codon	26092..26094(-)		WP_000434945.1	quorum-sensing system transcriptional regulator Rgg	100.0	34.3	39.2
MGA_803	LOCUS_07950	sequence09:43355..44386(+)	partial			WP_003549759.1	LPXTG cell wall anchor domain-containing protein	79.3	65.8	32.8
MGA_834	LOCUS_08260	sequence10:13450..13626(+)	partial			WP_000512112.1	twin-arginine translocase TatA/TatE family subunit	72.4	75.0	90.5
MGA_883	LOCUS_08750	sequence11:8954..9802(+)	partial			WP_002263552.1	MFS transporter	93.6	66.8	31.1
MGA_914	LOCUS_09060	sequence11:42088..42687(+)	partial			WP_000747503.1	YitT family protein	93.5	66.7	32.8
MGA_937	LOCUS_09290	sequence12:11955..12677(-)	partial			WP_002263014.1	MmcQ/YjbR family DNA-binding protein	93.8	65.5	45.7
MGA_943	LOCUS_09350	sequence12:16640..16930(+)	frameshift		16626	WP_205010637.1	IS30 family transposase	72.9	22.1	67.1
MGA_961	LOCUS_09530	sequence12:40718..40858(+)	partial			WP_000268685.1	SPJ_0845 family protein	65.2	69.8	86.7
MGA_969	LOCUS_09610	sequence12:49070..52036(-)	partial			WP_000700331.1	pneumococcal histidine triad protein PhtD	44.7	45.3	52.2
MGA_1007	LOCUS_09990	sequence13:39358..41052(-)	partial			WP_000677374.1	NTPase	77.0	68.2	35.8
MGA_1012	LOCUS_10040	sequence13:44408..45856(+)	partial			WP_011836292.1	murein hydrolase LytF	87.6	66.1	36.1
MGA_1086	LOCUS_10750	sequence15:34570..34893(+)	partial			WP_002439334.1	XRE family transcriptional regulator	57.9	34.6	46.8
MGA_1101	LOCUS_10880	sequence16:1184..1636(-)	partial			WP_011837203.1	YtxH domain-containing protein	76.7	71.9	60.9
MGA_1130	LOCUS_11170	sequence16:29202..34994(-)	partial			WP_011109085.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	6.9	9.5	33.1
MGA_1141	LOCUS_11280	sequence16:44317..45312(+)	partial			WP_011836847.1	DNA/RNA non-specific endonuclease	59.5	77.9	59.4
MGA_1152	LOCUS_11390	sequence17:13466..14005(-)	internal_stop_codon	14021..14023(-)		WP_002903178.1	GNAT family N-acetyltransferase	97.2	70.4	51.1
MGA_1153	LOCUS_11400	sequence17:14021..14209(-)	internal_stop_codon	14021..14023(-)		WP_000418692.1	GNAT family N-acetyltransferase	82.3	21.1	43.1
MGA_1181	LOCUS_11680	sequence17:43373..44002(-)	partial			WP_012775212.1	ISL3 family transposase	100.0	50.0	82.3
MGA_1199	LOCUS_11850	sequence18:25241..26911(-)	partial			WP_003854963.1	carboxylesterase/lipase family protein	39.4	40.5	40.4
MGA_1205	LOCUS_11910	sequence18:34507..35130(-)	partial			WP_003818529.1	TetR/AcrR family transcriptional regulator	76.8	74.1	28.1
MGA_1209	LOCUS_11950	sequence18:38433..38759(+)	partial			WP_115265112.1	IS630 family transposase	98.1	30.3	76.4
MGA_1210	LOCUS_11960	sequence18:38808..42134(+)	partial			WP_011020305.1	VWA domain-containing protein	14.6	27.2	31.1
MGA_1214	LOCUS_12000	sequence18:43715..43921(+)	partial			WP_000691850.1	hypothetical protein	72.1	76.6	63.3
MGA_1245	LOCUS_12300	sequence19:33405..33893(-)	partial			WP_002897353.1	GNAT family N-acetyltransferase	99.4	56.3	47.8
MGA_1247	LOCUS_12320	sequence19:34687..36378(-)	partial			WP_002263022.1	hypothetical protein	60.9	62.2	28.0
MGA_1248	LOCUS_12330	sequence19:36393..37445(-)	partial			WP_003642217.1	zinc ribbon domain-containing protein	62.3	70.0	23.4
MGA_1286	LOCUS_12710	sequence20:20807..23638(-)	partial			WP_000679939.1	LPXTG-anchored beta-N-acetylhexosaminidase StrH	25.1	19.1	32.8
MGA_1311	LOCUS_12960	sequence21:5696..12265(-)	partial			WP_041814900.1	Rib/alpha-like domain-containing protein	39.2	46.4	30.9
MGA_1323	LOCUS_13080	sequence21:24682..24858(-)	partial			WP_000048054.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1343	LOCUS_13270	sequence22:320..526(+)	partial			WP_000691850.1	hypothetical protein	67.6	71.9	67.4
MGA_1380	LOCUS_13640	sequence22:34307..35575(+)	partial			WP_011068396.1	ABC transporter permease	69.2	65.8	23.2
MGA_1400	LOCUS_13840	sequence23:17265..19460(+)	internal_stop_codon	17127..17129(+),17019..17021(+),19458..19460(+),17091..17093(+),17055..17057(+)		WP_235601755.1	hypothetical protein	99.6	67.8	40.0
MGA_1401	LOCUS_13850	sequence23:19578..21074(+)	internal_stop_codon	21072..21074(+),19458..19460(+)		WP_002485492.1	hypothetical protein	46.8	46.5	38.7
MGA_1412	LOCUS_13960	sequence23:35483..36352(-)	partial			WP_001232160.1	glycosyltransferase family 8 protein	100.0	74.1	37.7
MGA_1451	LOCUS_14350	sequence25:1069..1542(+)	partial			WP_012775468.1	helix-turn-helix domain-containing protein	76.4	39.2	45.1
MGA_1487	LOCUS_14690	sequence26:4245..4463(+)	partial			WP_012027462.1	helix-turn-helix transcriptional regulator	73.6	30.6	50.9
MGA_1492	LOCUS_14740	sequence26:7984..10509(+)	partial			WP_002484637.1	AAA family ATPase	47.2	46.0	25.7
MGA_1499	LOCUS_14810	sequence26:17064..19634(+)	partial			WP_013230933.1	DEAD/DEAH box helicase	53.5	71.5	26.0
MGA_1504	LOCUS_14860	sequence26:23564..23722(-)	partial			WP_010922054.1	helix-turn-helix transcriptional regulator	84.6	17.4	68.2
MGA_1505	LOCUS_14870	sequence26:23725..24237(-)	partial			WP_001080846.1	helix-turn-helix transcriptional regulator	36.5	44.0	62.9
MGA_1526	LOCUS_15080	sequence27:9421..10734(+)	frameshift		10629	WP_002901104.1	ABC transporter substrate-binding protein	92.0	75.1	59.2
MGA_1527	LOCUS_15090	sequence27:10712..10957(+)	frameshift		10707	WP_002901104.1	ABC transporter substrate-binding protein	97.5	14.9	63.3
MGA_1559	LOCUS_15410	sequence28:17017..22911(+)	partial			WP_011836870.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	73.4	47.9	33.1
MGA_1573	LOCUS_15550	sequence29:14052..16244(+)	partial			WP_012028341.1	C69 family dipeptidase	51.4	62.8	56.0
MGA_1574	LOCUS_15560	sequence29:16323..19901(+)	partial			WP_000417171.1	immunoglobulin A1 protease	71.6	43.0	36.0
MGA_1575	LOCUS_15570	sequence29:20137..22314(+)	partial			WP_012028341.1	C69 family dipeptidase	72.0	76.1	43.1
MGA_1576	LOCUS_15580	sequence29:22452..25727(+)	partial			WP_011476404.1	Xaa-Pro dipeptidyl-peptidase	62.9	82.8	29.8
MGA_1580	LOCUS_15620	sequence30:4897..14088(+)	partial			WP_025189858.1	glycoside hydrolase family 31 protein	42.0	69.3	45.7
MGA_1583	LOCUS_15630	sequence31:235..438(+)	frameshift,internal_stop_codon	212..214(+),206..208(+)	232	WP_068990772.1	IS66-like element short variant transposase	100.0	14.9	95.5
MGA_1592	LOCUS_15710	sequence31:8602..11274(+)	partial			WP_011836393.1	GBS Bsp-like repeat-containing protein	21.8	20.0	61.3
MGA_1623	LOCUS_16010	sequence33:1..1202(+)	partial			WP_002900650.1	GBS Bsp-like repeat-containing protein	100.0	28.6	47.1
MGA_1661	LOCUS_16370	sequence35:200..511(+)	frameshift,internal_stop_codon	498..500(+),546..548(+)	164,494	WP_068990772.1	IS66-like element short variant transposase	95.1	21.8	94.9
MGA_1662	LOCUS_16380	sequence35:553..807(+)	frameshift,internal_stop_codon	545..547(+),497..499(+)	493	WP_068990772.1	IS66-like element short variant transposase	67.9	12.7	94.7
MGA_1735	LOCUS_17090	sequence39:644..850(-)	partial			WP_000691850.1	hypothetical protein	72.1	76.6	61.2
MGA_1752	LOCUS_17260	sequence39:16414..17457(+)	partial			WP_000570093.1	hypothetical protein	54.8	50.7	28.9
MGA_1753	LOCUS_17270	sequence40:1..919(+)	partial			WP_000671355.1	PavB family fibronectin-binding SSURE repeat adhesin	100.0	40.3	46.0
MGA_1769	LOCUS_17430	sequence41:42..401(-)	partial			WP_001865283.1	glycosyltransferase family 8 protein	84.0	24.0	51.0
MGA_1801	LOCUS_17740	sequence43:1..958(+)	partial			WP_011837008.1	cell surface ecto-5'-nucleotidase Nt5e	31.4	14.0	36.3
MGA_1806	LOCUS_17790	sequence43:6470..7036(-)	partial			WP_001080846.1	helix-turn-helix transcriptional regulator	43.6	58.2	52.4
MGA_1809	LOCUS_17820	sequence43:7852..8571(+)	partial			WP_000531223.1	phage regulatory protein	45.2	38.9	36.7
MGA_1815	LOCUS_17880	sequence43:9887..10711(+)	partial			WP_000997689.1	replication initiator protein A	37.6	32.1	43.2
MGA_1866	LOCUS_18370	sequence47:1110..1298(-)	partial			WP_068990772.1	IS66-like element short variant transposase	56.5	7.8	85.7
MGA_1900	LOCUS_18710	sequence49:586..1149(+)	partial			WP_164925488.1	IS110 family transposase	100.0	43.5	88.8
MGA_1901	LOCUS_18720	sequence49:1775..3163(-)	partial			WP_011836524.1	sucrose-specific PTS transporter subunit IIBC	99.6	72.5	51.8
MGA_1941	LOCUS_19100	sequence53:2089..8586(+)	partial			WP_000489015.1	YSIRK signal domain/LPXTG anchor domain surface protein	24.9	46.4	25.8
MGA_2001	LOCUS_19640	sequence64:1667..>2294(-)	partial			WP_000278319.1	CshA/CshB family fibrillar adhesin-related protein	99.5	5.9	34.4
MGA_2007	LOCUS_19690	sequence66:862..1068(+)	partial			WP_000691850.1	hypothetical protein	73.5	78.1	66.0
MGA_2011	LOCUS_19720	sequence68:1..708(+)	partial			WP_068990772.1	IS66-like element short variant transposase	98.7	51.6	94.4
MGA_2012	LOCUS_19730	sequence68:757..1230(+)	frameshift,internal_stop_codon	1201..1203(+),1249..1251(+)	1197	WP_068990772.1	IS66-like element short variant transposase	93.6	32.0	87.1
MGA_2013	LOCUS_19740	sequence68:1257..1460(+)	frameshift,internal_stop_codon	1201..1203(+),1249..1251(+)	1197	WP_068990772.1	IS66-like element short variant transposase	100.0	14.9	92.5
MGA_2020	LOCUS_19780	sequence73:78..827(+)	partial			WP_068990772.1	IS66-like element short variant transposase	97.2	53.8	94.6
MGA_2038	LOCUS_19850	sequence83:212..418(+)	partial			WP_000691850.1	hypothetical protein	72.1	76.6	61.2