{ "tc_result": [ { "organism_name": "Salipiger pallidus", "strain": "strain=CGMCC 1.15762", "accession": "GCA_014643635.1", "taxid": 1775170, "species_taxid": 1775170, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1471, "total_fragments": 1472, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Salipiger profundus", "strain": "strain=JLT2016", "accession": "GCA_001969385.1", "taxid": 1229727, "species_taxid": 1229727, "relation_to_type": "type", "validated": true, "ani": 82.3884, "matched_fragments": 891, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salipiger profundus", "strain": "strain=CGMCC 1.12377", "accession": "GCA_014637265.1", "taxid": 1229727, "species_taxid": 1229727, "relation_to_type": "type", "validated": true, "ani": 82.337, "matched_fragments": 869, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salipiger thiooxidans", "strain": "strain=DSM 10146", "accession": "GCA_900102075.1", "taxid": 282683, "species_taxid": 282683, "relation_to_type": "type", "validated": true, "ani": 82.1574, "matched_fragments": 897, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salipiger bermudensis", "strain": "strain=HTCC2601", "accession": "GCA_000153725.1", "taxid": 344736, "species_taxid": 344736, "relation_to_type": "type", "validated": true, "ani": 81.8779, "matched_fragments": 906, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Yangia pacifica", "strain": "strain=DSM 26894", "accession": "GCA_900116195.1", "taxid": 311180, "species_taxid": 311180, "relation_to_type": "suspected-type", "validated": true, "ani": 80.5423, "matched_fragments": 751, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Yangia pacifica", "strain": "strain=CGMCC 1.3455", "accession": "GCA_900100725.1", "taxid": 311180, "species_taxid": 311180, "relation_to_type": "suspected-type", "validated": true, "ani": 80.5004, "matched_fragments": 757, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salipiger aestuarii", "strain": "strain=AD8", "accession": "GCA_008930655.1", "taxid": 568098, "species_taxid": 568098, "relation_to_type": "type", "validated": true, "ani": 80.0258, "matched_fragments": 673, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salipiger aestuarii", "strain": "strain=DSM 22011", "accession": "GCA_003259905.1", "taxid": 568098, "species_taxid": 568098, "relation_to_type": "type", "validated": true, "ani": 79.9882, "matched_fragments": 674, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salipiger marinus", "strain": "strain=DSM 26424", "accession": "GCA_900100085.1", "taxid": 555512, "species_taxid": 555512, "relation_to_type": "type", "validated": true, "ani": 79.7157, "matched_fragments": 670, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mameliella sediminis", "strain": "strain=DP3N28-2", "accession": "GCA_019218285.1", "taxid": 2836866, "species_taxid": 2836866, "relation_to_type": "type", "validated": true, "ani": 77.9443, "matched_fragments": 450, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum tesquicola", "strain": "strain=A-36s", "accession": "GCA_024128855.1", "taxid": 540254, "species_taxid": 540254, "relation_to_type": "type", "validated": true, "ani": 77.6245, "matched_fragments": 367, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Palleronia rufa", "strain": "strain=MOLA 401", "accession": "GCA_000743715.1", "taxid": 1530186, "species_taxid": 1530186, "relation_to_type": "type", "validated": true, "ani": 77.5567, "matched_fragments": 309, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014643635.1", "gtdb_species": "s__Salipiger pallidus", "ani": 100.0, "matched_fragments": 1471, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_001969385.1", "gtdb_species": "s__Salipiger profundus", "ani": 82.3847, "matched_fragments": 891, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.85", "min_intra_species_ani": "99.64", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_900102075.1", "gtdb_species": "s__Salipiger thiooxidans", "ani": 82.1381, "matched_fragments": 901, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.34", "min_intra_species_ani": "95.88", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.85", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_000153725.1", "gtdb_species": "s__Salipiger bermudensis", "ani": 81.8609, "matched_fragments": 909, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.06", "min_intra_species_ani": "97.75", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.75", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_017311415.1", "gtdb_species": "s__Salipiger abyssi_A", "ani": 81.3322, "matched_fragments": 798, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001975705.1", "gtdb_species": "s__Salipiger abyssi", "ani": 81.2017, "matched_fragments": 811, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002300555.1", "gtdb_species": "s__Salipiger sp002300555", "ani": 80.7489, "matched_fragments": 557, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900116195.1", "gtdb_species": "s__Salipiger pacificus", "ani": 80.5376, "matched_fragments": 752, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_018860705.1", "gtdb_species": "s__Salipiger sp018860705", "ani": 80.5158, "matched_fragments": 758, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015223355.1", "gtdb_species": "s__Salipiger pacificus_B", "ani": 80.4103, "matched_fragments": 747, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000442255.1", "gtdb_species": "s__Salipiger mucosus", "ani": 80.3864, "matched_fragments": 742, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003111685.1", "gtdb_species": "s__Salipiger pacificus_A", "ani": 80.3571, "matched_fragments": 732, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.69", "min_intra_species_ani": "97.64", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001687105.1", "gtdb_species": "s__Salipiger sp001687105", "ani": 80.2849, "matched_fragments": 730, "total_fragments": 1472, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.47", "min_intra_species_ani": "96.47", "mean_intra_species_af": "0.82", "min_intra_species_af": "0.82", "num_clustered_genomes": 2, "status": "-" } ] }