{
    "type": "genome",
    "identifier": "GCF_014644875.1",
    "organism": "Micrococcus flavus",
    "title": "Micrococcus flavus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_014644875.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00245128",
        "wgs_master": "BMLA00000000.1",
        "refseq_category": "na",
        "taxid": "384602",
        "species_taxid": "384602",
        "organism_name": "Micrococcus flavus",
        "infraspecific_name": "strain=CGMCC 1.5361",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/09/11",
        "asm_name": "ASM1464487v1",
        "asm_submitter": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)",
        "gbrs_paired_asm": "GCA_014644875.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/644/875/GCF_014644875.1_ASM1464487v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2554973",
        "genome_size_ungapped": "2554576",
        "gc_percent": "73.000000",
        "replicon_count": "0",
        "scaffold_count": "64",
        "contig_count": "64",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_014644875.1-RS_2024_08_02",
        "annotation_date": "2024-08-02",
        "total_gene_count": "2395",
        "protein_coding_gene_count": "2289",
        "non_coding_gene_count": "60",
        "pubmed_id": "30832757"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-09-11",
    "dateModified": "2020-09-11",
    "datePublished": "2020-09-11",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Micrococcus flavus"
        ],
        "sample_taxid": [
            "384602"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not applicable"
        ],
        "sample_host_location_id": [],
        "data_size": "0.676 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2554973",
        "Number of Sequences": "64",
        "Longest Sequences (bp)": "842910",
        "N50 (bp)": "292169",
        "Gap Ratio (%)": "0.015538",
        "GCcontent (%)": "73.2",
        "Number of CDSs": "2333",
        "Average Protein Length": "329.3",
        "Coding Ratio (%)": "90.2",
        "Number of rRNAs": "4",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Micrococcus flavus",
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                "relation_to_type": "type",
                "validated": true,
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            },
            {
                "organism_name": "Micrococcus flavus",
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                "validated": true,
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            },
            {
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                "species_taxid": 455343,
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                "ani_threshold": 95,
                "status": "below_threshold"
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                "status": "below_threshold"
            },
            {
                "organism_name": "Micrococcus luteus",
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                "species_taxid": 1270,
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            },
            {
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                "species_taxid": 1273,
                "relation_to_type": "type",
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                "ani": 82.7133,
                "matched_fragments": 523,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas palmilytica",
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                "accession": "GCA_021590045.1",
                "taxid": 2608402,
                "species_taxid": 2608402,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Occultella aeris",
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                "accession": "GCA_902703175.1",
                "taxid": 2761496,
                "species_taxid": 2761496,
                "relation_to_type": "type",
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                "ani": 77.0179,
                "matched_fragments": 235,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas fulva",
                "strain": "strain=DKR-3",
                "accession": "GCA_018531375.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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                "accession": "GCF_014204815.1",
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                "mean_intra_species_af": "1.00",
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                "num_clustered_genomes": 4,
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}