{ "type": "genome", "identifier": "GCF_014645655.1", "organism": "Agromyces bauzanensis", "title": "Agromyces bauzanensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014645655.1", "bioproject": "PRJNA224116", "biosample": "SAMD00245164", "wgs_master": "BMMD00000000.1", "refseq_category": "reference genome", "taxid": "1308924", "species_taxid": "1308924", "organism_name": "Agromyces bauzanensis", "infraspecific_name": "strain=CGMCC 1.8984", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/09/12", "asm_name": "ASM1464565v1", "asm_submitter": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "gbrs_paired_asm": "GCA_014645655.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/645/655/GCF_014645655.1_ASM1464565v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3722120", "genome_size_ungapped": "3722120", "gc_percent": "70.000000", "replicon_count": "0", "scaffold_count": "93", "contig_count": "93", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014645655.1-RS_2024_09_02", "annotation_date": "2024-09-02", "total_gene_count": "3784", "protein_coding_gene_count": "3589", "non_coding_gene_count": "53", "pubmed_id": "30832757" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-09-12", "dateModified": "2020-09-12", "datePublished": "2020-09-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Agromyces bauzanensis" ], "sample_taxid": [ "1308924" ], "sample_host_organism": [], 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"status": "below_threshold" }, { "organism_name": "Agromyces badenianii", "strain": "strain=MF30-A", "accession": "GCA_003070885.1", "taxid": 2080742, "species_taxid": 2080742, "relation_to_type": "type", "validated": true, "ani": 82.8084, "matched_fragments": 689, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces fucosus", "strain": "strain=CCUG 35506", "accession": "GCA_004134865.1", "taxid": 41985, "species_taxid": 41985, "relation_to_type": "type", "validated": true, "ani": 82.8051, "matched_fragments": 735, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces cerinus subsp. cerinus", "strain": "strain=DSM 8595", "accession": "GCA_900142065.1", "taxid": 232089, "species_taxid": 33878, "relation_to_type": "type", "validated": true, "ani": 82.7566, "matched_fragments": 735, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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2662258, "relation_to_type": "type", "validated": true, "ani": 82.0224, "matched_fragments": 690, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014645655.1", "gtdb_species": "s__Agromyces bauzanensis", "ani": 100.0, "matched_fragments": 1200, "total_fragments": 1205, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_004959775.1", "gtdb_species": "s__Agromyces sp004959775", "ani": 89.3062, "matched_fragments": 897, "total_fragments": 1205, "gtdb_taxonomy": 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