{ "tc_result": [ { "organism_name": "Actinoplanes nipponensis", "strain": "strain=NBRC 14063", "accession": "GCA_016862275.1", "taxid": 135950, "species_taxid": 135950, "relation_to_type": "type", "validated": true, "ani": 80.5, "matched_fragments": 1316, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes digitatis", "strain": "strain=NBRC 12512", "accession": "GCA_016862155.1", "taxid": 1868, "species_taxid": 1868, "relation_to_type": "type", "validated": true, "ani": 80.4436, "matched_fragments": 1236, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes auranticolor", "strain": "strain=NBRC 12245", "accession": "GCA_018332655.1", "taxid": 47988, "species_taxid": 47988, "relation_to_type": "type", "validated": true, "ani": 80.4013, "matched_fragments": 1276, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes digitatis", "strain": "strain=DSM 43149", "accession": "GCA_014205335.1", "taxid": 1868, "species_taxid": 1868, "relation_to_type": "type", "validated": true, "ani": 80.3379, "matched_fragments": 1283, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Couchioplanes caeruleus subsp. caeruleus", "strain": "strain=DSM 43634", "accession": "GCA_001884705.1", "taxid": 56427, "species_taxid": 56438, "relation_to_type": "type", "validated": true, "ani": 80.2241, "matched_fragments": 1027, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes teichomyceticus", "strain": "strain=ATCC 31121", "accession": "GCA_003711105.1", "taxid": 1867, "species_taxid": 1867, "relation_to_type": "type", "validated": true, "ani": 80.1876, "matched_fragments": 1152, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Couchioplanes caeruleus", "strain": "strain=DSM 43634", "accession": "GCA_003751945.1", "taxid": 56438, "species_taxid": 56438, "relation_to_type": "type", "validated": true, "ani": 80.1582, "matched_fragments": 1102, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes teichomyceticus", "strain": "strain=DSM 43866", "accession": "GCA_007829915.1", "taxid": 1867, "species_taxid": 1867, "relation_to_type": "type", "validated": true, "ani": 80.1143, "matched_fragments": 1161, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes teichomyceticus", "strain": "strain=NBRC 13999", "accession": "GCA_016862415.1", "taxid": 1867, "species_taxid": 1867, "relation_to_type": "type", "validated": true, "ani": 80.0789, "matched_fragments": 1137, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes rishiriensis", "strain": "strain=NBRC 108556", "accession": "GCA_016862375.1", "taxid": 1050105, "species_taxid": 1050105, "relation_to_type": "type", "validated": true, "ani": 79.8772, "matched_fragments": 1245, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes subtropicus", "strain": "strain=NRRL B-24665", "accession": "GCA_000721705.1", "taxid": 543632, "species_taxid": 543632, "relation_to_type": "type", "validated": true, "ani": 79.8555, "matched_fragments": 1242, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes octamycinicus", "strain": "strain=NBRC 14524", "accession": "GCA_016862295.1", "taxid": 135948, "species_taxid": 135948, "relation_to_type": "type", "validated": true, "ani": 79.8411, "matched_fragments": 1237, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes octamycinicus", "strain": "strain=DSM 45809", "accession": "GCA_014205225.1", "taxid": 135948, "species_taxid": 135948, "relation_to_type": "type", "validated": true, "ani": 79.7735, "matched_fragments": 1278, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes abujensis", "strain": "strain=DSM 45518", "accession": "GCA_014204895.1", "taxid": 882441, "species_taxid": 882441, "relation_to_type": "type", "validated": true, "ani": 79.737, "matched_fragments": 1153, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes friuliensis", "strain": "strain=DSM 7358", "accession": "GCA_000494755.1", "taxid": 196914, "species_taxid": 196914, "relation_to_type": "type", "validated": true, "ani": 79.7211, "matched_fragments": 1190, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes lichenicola", "strain": "strain=LDG1-01", "accession": "GCA_016785085.1", "taxid": 2802976, "species_taxid": 2802976, "relation_to_type": "type", "validated": true, "ani": 79.6446, "matched_fragments": 1208, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes deccanensis", "strain": "strain=NBRC 13994", "accession": "GCA_016862115.1", "taxid": 113561, "species_taxid": 113561, "relation_to_type": "type", "validated": true, "ani": 79.6024, "matched_fragments": 1234, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes capillaceus", "strain": "strain=NBRC 16408", "accession": "GCA_016862055.1", "taxid": 76756, "species_taxid": 76756, "relation_to_type": "type", "validated": true, "ani": 79.5662, "matched_fragments": 1111, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes flavus", "strain": "strain=NEAU-H7", "accession": "GCA_017592555.1", "taxid": 2820290, "species_taxid": 2820290, "relation_to_type": "type", "validated": true, "ani": 79.4901, "matched_fragments": 1139, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora phytophila", "strain": "strain=DSM 105363", "accession": "GCA_023656545.1", "taxid": 709888, "species_taxid": 709888, "relation_to_type": "type", "validated": true, "ani": 78.8965, "matched_fragments": 715, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora humida", "strain": "strain=MMS20-R1-14", "accession": "GCA_016901255.1", "taxid": 2809018, "species_taxid": 2809018, "relation_to_type": "type", "validated": true, "ani": 78.6311, "matched_fragments": 926, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phytohabitans suffuscus", "strain": "strain=NBRC 105367", "accession": "GCA_011764565.1", "taxid": 624315, "species_taxid": 624315, "relation_to_type": "type", "validated": true, "ani": 77.9048, "matched_fragments": 1018, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dactylosporangium matsuzakiense", "strain": "strain=NRRL B-16293", "accession": "GCA_025264725.1", "taxid": 53360, "species_taxid": 53360, "relation_to_type": "type", "validated": true, "ani": 77.0751, "matched_fragments": 913, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis thermalba", "strain": "strain=NRRL B-24845", "accession": "GCA_003385215.1", "taxid": 944492, "species_taxid": 944492, "relation_to_type": "type", "validated": true, "ani": 76.141, "matched_fragments": 568, "total_fragments": 2444, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 1.04, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014646155.1", "gtdb_species": "s__Actinoplanes endophyticus", "ani": 100.0, "matched_fragments": 2441, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_016862275.1", "gtdb_species": "s__Actinoplanes nipponensis", "ani": 80.5173, "matched_fragments": 1311, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014648355.1", "gtdb_species": "s__Actinoplanes azureus", "ani": 80.4366, "matched_fragments": 1108, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014205335.1", "gtdb_species": "s__Actinoplanes digitatis", "ani": 80.3416, "matched_fragments": 1282, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_016464385.1", "gtdb_species": "s__Actinoplanes sp016464385", "ani": 80.2556, "matched_fragments": 1263, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003002065.1", "gtdb_species": "s__Actinoplanes ferrugineus_A", "ani": 80.2333, "matched_fragments": 1229, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.31", "min_intra_species_ani": "99.31", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003711105.1", "gtdb_species": "s__Actinoplanes teichomyceticus", "ani": 80.2011, "matched_fragments": 1148, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_003751945.1", "gtdb_species": "s__Actinoplanes caeruleus", "ani": 80.1882, "matched_fragments": 1096, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004217545.1", "gtdb_species": "s__Actinoplanes cinnamomeus", "ani": 80.1481, "matched_fragments": 1091, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000389965.1", "gtdb_species": "s__Actinoplanes sp000389965", "ani": 80.0896, "matched_fragments": 1236, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016862375.1", "gtdb_species": "s__Actinoplanes rishiriensis", "ani": 79.9376, "matched_fragments": 1232, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000721705.1", "gtdb_species": "s__Actinoplanes subtropicus", "ani": 79.9088, "matched_fragments": 1231, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016862395.1", "gtdb_species": "s__Actinoplanes siamensis", "ani": 79.8763, "matched_fragments": 1109, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014204895.1", "gtdb_species": "s__Actinoplanes abujensis", "ani": 79.7771, "matched_fragments": 1143, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014205225.1", "gtdb_species": "s__Actinoplanes octamycinicus", "ani": 79.7154, "matched_fragments": 1291, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_016785085.1", "gtdb_species": "s__Actinoplanes sp016785085", "ani": 79.6702, "matched_fragments": 1202, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016862315.1", "gtdb_species": "s__Actinoplanes palleronii", "ani": 79.5996, "matched_fragments": 1222, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.70", "min_intra_species_ani": "97.70", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_017592555.1", "gtdb_species": "s__Actinoplanes sp017592555", "ani": 79.4914, "matched_fragments": 1142, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016863475.1", "gtdb_species": "s__Spirilliplanes yamanashiensis", "ani": 79.1707, "matched_fragments": 1077, "total_fragments": 2444, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Spirilliplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }