{ "tc_result": [ { "organism_name": "Microbacterium lacticum", "strain": "strain=JCM 1379", "accession": "GCA_014646835.1", "taxid": 33885, "species_taxid": 33885, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 887, "total_fragments": 889, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Microbacterium lacticum", "strain": "strain=DSM 20427", "accession": "GCA_006716815.1", "taxid": 33885, "species_taxid": 33885, "relation_to_type": "type", "validated": true, "ani": 99.9912, "matched_fragments": 886, "total_fragments": 889, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Microbacterium lacticum", "strain": "strain=NBRC 14135", "accession": "GCA_006539445.1", "taxid": 33885, "species_taxid": 33885, "relation_to_type": "type", "validated": true, "ani": 99.9677, "matched_fragments": 849, "total_fragments": 889, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Microbacterium paulum", "strain": "strain=2C", "accession": "GCA_015707995.1", "taxid": 2707006, "species_taxid": 2707006, "relation_to_type": "type", "validated": true, "ani": 88.6619, "matched_fragments": 671, "total_fragments": 889, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium aurum", "strain": "strain=DSM 8600", "accession": "GCA_016907815.1", "taxid": 36805, "species_taxid": 36805, "relation_to_type": "type", "validated": true, "ani": 84.1056, "matched_fragments": 653, "total_fragments": 889, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium dextranolyticum", "strain": "strain=DSM 8607", "accession": "GCA_016907295.1", "taxid": 36806, "species_taxid": 36806, "relation_to_type": "type", "validated": true, "ani": 83.8628, "matched_fragments": 598, "total_fragments": 889, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hominis", "strain": "strain=LCDC 84-0209", "accession": "GCA_001553805.1", "taxid": 162426, "species_taxid": 162426, "relation_to_type": "type", "validated": true, "ani": 83.3987, "matched_fragments": 591, "total_fragments": 889, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium telephonicum", "strain": "strain=S2T63", "accession": "GCA_003651225.1", "taxid": 1714841, "species_taxid": 1714841, "relation_to_type": "type", "validated": true, "ani": 82.7892, "matched_fragments": 598, "total_fragments": 889, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium cremeum", "strain": "strain=NY27", "accession": "GCA_015277855.1", "taxid": 2782169, "species_taxid": 2782169, "relation_to_type": "type", "validated": true, "ani": 81.5216, "matched_fragments": 509, "total_fragments": 889, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium gallinarum", "strain": "strain=Sa1CUA4", "accession": "GCA_014837165.1", "taxid": 2762209, "species_taxid": 2762209, "relation_to_type": "type", "validated": true, "ani": 81.4098, "matched_fragments": 528, "total_fragments": 889, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium pullorum", "strain": "strain=Sa4CUA7", "accession": "GCA_014836535.1", "taxid": 2762236, "species_taxid": 2762236, "relation_to_type": "type", "validated": true, "ani": 81.2058, "matched_fragments": 527, "total_fragments": 889, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium yannicii", "strain": "strain=DSM 23203", "accession": "GCA_024055635.1", "taxid": 671622, "species_taxid": 671622, "relation_to_type": "type", "validated": true, "ani": 80.8675, "matched_fragments": 517, "total_fragments": 889, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_006716815.1", "gtdb_species": "s__Microbacterium lacticum", "ani": 99.9912, "matched_fragments": 886, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.05", "min_intra_species_ani": "97.16", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.78", "num_clustered_genomes": 4, "status": "conclusive" }, { "accession": "GCF_015707995.1", "gtdb_species": "s__Microbacterium sp015707995", "ani": 88.6619, "matched_fragments": 671, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017305435.1", "gtdb_species": "s__Microbacterium sp017305435", "ani": 84.2977, "matched_fragments": 646, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001898315.1", "gtdb_species": "s__Microbacterium sp001898315", "ani": 84.2544, "matched_fragments": 625, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_016907815.1", "gtdb_species": "s__Microbacterium aurum", "ani": 84.0904, "matched_fragments": 654, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.09", "min_intra_species_ani": "96.17", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.83", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_003248655.1", "gtdb_species": "s__Microbacterium sp003248655", "ani": 83.9943, "matched_fragments": 592, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016907295.1", "gtdb_species": "s__Microbacterium dextranolyticum", "ani": 83.8594, "matched_fragments": 599, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001724425.1", "gtdb_species": "s__Microbacterium sp001724425", "ani": 83.6532, "matched_fragments": 571, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_018717645.1", "gtdb_species": "s__Microbacterium flavum", "ani": 83.5366, "matched_fragments": 652, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001592125.1", "gtdb_species": "s__Microbacterium hominis", "ani": 83.3845, "matched_fragments": 592, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.96", "min_intra_species_ani": "98.42", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_016807485.1", "gtdb_species": "s__Microbacterium sp016807485", "ani": 83.0463, "matched_fragments": 391, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003651225.1", "gtdb_species": "s__Microbacterium telephonicum", "ani": 82.8211, "matched_fragments": 596, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016907555.1", "gtdb_species": "s__Microbacterium laevaniformans", "ani": 82.6509, "matched_fragments": 589, "total_fragments": 889, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.33", "min_intra_species_ani": "96.04", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.81", "num_clustered_genomes": 5, "status": "-" } ] }