{ "tc_result": [ { "organism_name": "Thermus thermophilus", "strain": "strain=JCM10941", "accession": "GCA_019973715.1", "taxid": 274, "species_taxid": 274, "relation_to_type": "type", "validated": true, "ani": 88.7662, "matched_fragments": 527, "total_fragments": 661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermus thermophilus", "strain": "strain=HB8", "accession": "GCA_000091545.1", "taxid": 274, "species_taxid": 274, "relation_to_type": "type", "validated": true, "ani": 88.7458, "matched_fragments": 538, "total_fragments": 661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermus parvatiensis", "strain": "strain=RL", "accession": "GCA_000252835.2", "taxid": 456163, "species_taxid": 456163, "relation_to_type": "type", "validated": true, "ani": 88.7394, "matched_fragments": 516, "total_fragments": 661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermus parvatiensis", "strain": "strain=RL", "accession": "GCA_001535545.1", "taxid": 456163, "species_taxid": 456163, "relation_to_type": "type", "validated": true, "ani": 88.6891, "matched_fragments": 541, "total_fragments": 661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermus arciformis", "strain": "strain=CGMCC 1.6992", "accession": "GCA_900102145.1", "taxid": 482827, "species_taxid": 482827, "relation_to_type": "type", "validated": true, "ani": 88.5617, "matched_fragments": 549, "total_fragments": 661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermus arciformis", "strain": "strain=JCM 15153", "accession": "GCA_022556335.1", "taxid": 482827, "species_taxid": 482827, "relation_to_type": "type", "validated": true, "ani": 88.5024, "matched_fragments": 549, "total_fragments": 661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermus aquaticus", "strain": "strain=YT-1", "accession": "GCA_001280255.1", "taxid": 271, "species_taxid": 271, "relation_to_type": "type", "validated": true, "ani": 85.9539, "matched_fragments": 548, "total_fragments": 661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermus igniterrae", "strain": "strain=ATCC 700962", "accession": "GCA_000376265.1", "taxid": 88189, "species_taxid": 88189, "relation_to_type": "type", "validated": true, "ani": 85.8656, "matched_fragments": 529, "total_fragments": 661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermus islandicus", "strain": "strain=DSM 21543", "accession": "GCA_000421625.1", "taxid": 540988, "species_taxid": 540988, "relation_to_type": "type", "validated": true, "ani": 85.6333, "matched_fragments": 517, "total_fragments": 661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermus thermamylovorans", "strain": "strain=CFH 72773T", "accession": "GCA_004307015.1", "taxid": 2509362, "species_taxid": 2509362, "relation_to_type": "type", "validated": true, "ani": 85.5861, "matched_fragments": 541, "total_fragments": 661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermus sediminis", "strain": "strain=L198", "accession": "GCA_003426945.1", "taxid": 1761908, "species_taxid": 1761908, "relation_to_type": "type", "validated": true, "ani": 85.419, "matched_fragments": 520, "total_fragments": 661, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014647535.1", "gtdb_species": "s__Thermus composti", "ani": 100.0, "matched_fragments": 658, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_001535545.1", "gtdb_species": "s__Thermus parvatiensis", "ani": 88.7282, "matched_fragments": 539, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.7334, "mean_intra_species_ani": "98.79", "min_intra_species_ani": "98.79", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000091545.1", "gtdb_species": "s__Thermus thermophilus", "ani": 88.7139, "matched_fragments": 540, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.7334, "mean_intra_species_ani": "98.46", "min_intra_species_ani": "96.78", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.87", "num_clustered_genomes": 18, "status": "-" }, { "accession": "GCF_900102145.1", "gtdb_species": "s__Thermus arciformis", "ani": 88.5873, "matched_fragments": 548, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002355995.1", "gtdb_species": "s__Thermus thermophilus_C", "ani": 88.3576, "matched_fragments": 523, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.6833, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001311585.1", "gtdb_species": "s__Thermus sp001311585", "ani": 87.1976, "matched_fragments": 358, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000794385.1", "gtdb_species": "s__Thermus sp000794385", "ani": 86.9799, "matched_fragments": 536, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001880325.1", "gtdb_species": "s__Thermus brockianus", "ani": 86.4296, "matched_fragments": 537, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001280255.1", "gtdb_species": "s__Thermus aquaticus", "ani": 85.9817, "matched_fragments": 546, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.02", "min_intra_species_ani": "97.96", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000376265.1", "gtdb_species": "s__Thermus igniterrae", "ani": 85.9694, "matched_fragments": 523, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000421625.1", "gtdb_species": "s__Thermus islandicus", "ani": 85.6303, "matched_fragments": 517, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004307015.1", "gtdb_species": "s__Thermus thermamylovorans", "ani": 85.5716, "matched_fragments": 542, "total_fragments": 661, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }