# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_75	LOCUS_00750	sequence01:61191..61709(+)	internal_stop_codon	61707..61709(+)		WP_011254130.1	methyltransferase	100.0	83.5	73.8
MGA_94	LOCUS_00940	sequence01:76587..76751(-)	frameshift		76592	WP_003549147.1	sucrose-6-phosphate hydrolase	98.1	10.9	77.4
MGA_121	LOCUS_01210	sequence01:104190..104651(-)	partial			WP_003549215.1	glycerophosphodiester phosphodiesterase	92.8	31.2	76.8
MGA_128	LOCUS_01280	sequence01:109125..109808(-)	partial			WP_014565583.1	NAD(P)/FAD-dependent oxidoreductase	99.1	68.0	66.2
MGA_201	LOCUS_02010	sequence03:7124..7390(+)	frameshift		7378	WP_003547601.1	hypothetical protein	96.6	32.1	39.3
MGA_203	LOCUS_02030	sequence03:7565..7990(+)	frameshift		7378,7501	WP_003547601.1	hypothetical protein	85.8	42.2	37.7
MGA_212	LOCUS_02120	sequence03:14735..21946(+)	frameshift		14580	WP_011254524.1	Rib/alpha-like domain-containing protein	43.8	54.8	22.8
MGA_213	LOCUS_02130	sequence03:22012..22467(+)	frameshift		21877	WP_003548795.1	beta-N-acetylglucosaminidase AcmB	88.1	34.0	45.3
MGA_243	LOCUS_02430	sequence04:88..477(-)	partial			WP_009895475.1	NUDIX hydrolase	96.9	61.3	64.8
MGA_246	LOCUS_02460	sequence04:1899..2360(+)	frameshift		2321	WP_003640302.1	UbiA family prenyltransferase	90.8	43.2	54.0
MGA_267	LOCUS_02670	sequence04:27675..27827(-)	partial			WP_003706303.1	teichoic acid D-Ala incorporation-associated protein DltX	68.0	69.4	67.6
MGA_274	LOCUS_02740	sequence04:37211..37516(+)	partial			WP_011254625.1	YdcF family protein	100.0	27.5	63.4
MGA_275	LOCUS_02750	sequence04:37629..37772(+)	frameshift		37739	WP_011254626.1	ABC transporter ATP-binding protein/permease	83.0	5.0	84.6
MGA_276	LOCUS_02760	sequence04:37769..39109(+)	frameshift		37739	WP_011254626.1	ABC transporter ATP-binding protein/permease	99.8	57.0	73.9
MGA_287	LOCUS_02870	sequence04:46965..47330(-)	partial			WP_083755959.1	DUF4429 domain-containing protein	34.7	20.9	61.9
MGA_288	LOCUS_02880	sequence04:47341..48525(-)	partial			WP_003642762.1	glycosyltransferase	91.6	70.9	31.3
MGA_289	LOCUS_02890	sequence04:48615..50192(-)	partial			WP_011101976.1	choice-of-anchor A family protein	55.2	35.9	36.9
MGA_291	LOCUS_02910	sequence04:50817..51914(+)	partial			WP_001067278.1	AraC family transcriptional regulator	58.6	51.6	24.8
MGA_300	LOCUS_03000	sequence05:3238..3432(-)	partial			WP_012027779.1	DUF6176 family protein	81.2	39.7	53.8
MGA_369	LOCUS_03690	sequence06:17389..17613(+)	partial			WP_003547057.1	lipopolysaccharide assembly protein LapA domain-containing protein	75.7	69.1	51.8
MGA_438	LOCUS_04380	sequence07:42512..43054(+)	partial			WP_011254001.1	single-stranded DNA-binding protein	70.0	72.7	86.5
MGA_448	LOCUS_04480	sequence08:1..540(+)	partial			WP_003548795.1	beta-N-acetylglucosaminidase AcmB	80.4	35.9	40.9
MGA_450	LOCUS_04500	sequence08:2589..2930(-)	frameshift		2633	WP_011101590.1	plasma-membrane proton-efflux P-type ATPase	74.3	11.1	63.1
MGA_457	LOCUS_04570	sequence08:13178..13801(+)	partial			WP_011254066.1	SLAP domain-containing protein	57.5	26.7	35.8
MGA_458	LOCUS_04580	sequence08:13894..14328(-)	internal_stop_codon	14587..14589(-)		WP_001831473.1	glycerol-3-phosphate transporter	97.2	31.4	64.1
MGA_459	LOCUS_04590	sequence08:14587..15249(-)	internal_stop_codon	14587..14589(-)		WP_001831473.1	glycerol-3-phosphate transporter	99.5	48.2	65.3
MGA_466	LOCUS_04660	sequence08:22991..23332(+)	frameshift		23317	WP_011674997.1	helix-turn-helix domain-containing protein	93.8	64.6	35.5
MGA_468	LOCUS_04680	sequence08:23985..24887(+)	internal_stop_codon	23862..23864(+)		WP_003439865.1	BglG family transcription antiterminator	99.0	45.9	40.2
MGA_472	LOCUS_04720	sequence08:25802..26716(+)	frameshift		25672,25795	WP_071540970.1	fructose-specific PTS transporter subunit EIIC	92.1	61.3	47.2
MGA_473	LOCUS_04730	sequence08:26720..27946(+)	frameshift		27937	WP_010989460.1	alpha-mannosidase	100.0	46.9	51.2
MGA_474	LOCUS_04740	sequence08:28036..29355(+)	frameshift		27922	WP_011861780.1	glycoside hydrolase family 38 C-terminal domain-containing protein	99.5	50.2	38.0
MGA_475	LOCUS_04750	sequence08:29527..29763(+)	frameshift		29751	WP_011254524.1	Rib/alpha-like domain-containing protein	96.2	3.5	50.0
MGA_476	LOCUS_04760	sequence08:30051..30902(+)	frameshift		30884,30869,30863	WP_011109529.1	BspA family leucine-rich repeat surface protein	24.4	6.4	46.4
MGA_477	LOCUS_04770	sequence08:30895..33480(+)	frameshift		30884,30869,30863	WP_011109529.1	BspA family leucine-rich repeat surface protein	26.1	22.4	48.2
MGA_488	LOCUS_04880	sequence08:46762..47625(+)	frameshift		47583	WP_002262793.1	PTS cellobiose transporter subunit IIC	94.8	60.2	44.4
MGA_489	LOCUS_04890	sequence08:47589..48023(+)	frameshift		47574	WP_001032280.1	PTS sugar transporter subunit IIC	96.5	32.6	52.5
MGA_498	LOCUS_04980	sequence09:6952..7680(+)	frameshift		6868	WP_011674977.1	IS30 family transposase	89.3	63.6	54.9
MGA_526	LOCUS_05260	sequence09:32224..32607(-)	partial			WP_016381870.1	hypothetical protein	89.8	65.5	36.0
MGA_529	LOCUS_05290	sequence09:33366..33704(-)	frameshift		33702	WP_003563328.1	PTS system mannose/fructose/sorbose family transporter subunit IID	99.1	39.5	73.0
MGA_530	LOCUS_05300	sequence09:33697..34215(-)	frameshift		33702	WP_003563328.1	PTS system mannose/fructose/sorbose family transporter subunit IID	100.0	60.9	76.7
MGA_535	LOCUS_05350	sequence09:37759..38631(+)	partial			WP_002907421.1	sensor histidine kinase	100.0	66.1	46.2
MGA_536	LOCUS_05360	sequence09:38624..39109(+)	internal_stop_codon	39107..39109(+)		WP_002896732.1	response regulator transcription factor	100.0	70.9	65.2
MGA_537	LOCUS_05370	sequence09:39297..40037(+)	frameshift		40004	WP_002263458.1	extracellular solute-binding protein	98.8	56.6	39.9
MGA_538	LOCUS_05380	sequence09:40003..40596(+)	frameshift		40001	WP_011475507.1	extracellular solute-binding protein	99.0	45.5	41.8
MGA_575	LOCUS_05750	sequence10:36431..36712(-)	internal_stop_codon	36749..36751(-)		WP_003546250.1	GntR family transcriptional regulator	100.0	40.3	74.5
MGA_576	LOCUS_05760	sequence10:36749..37129(-)	internal_stop_codon	36749..36751(-)		WP_003546250.1	GntR family transcriptional regulator	100.0	54.1	88.1
MGA_578	LOCUS_05780	sequence10:38462..38932(-)	partial			WP_012775247.1	DUF3955 domain-containing protein	39.1	38.6	42.6
MGA_585	LOCUS_05840	sequence11:331..1116(-)	partial			WP_004255227.1	biotin--[acetyl-CoA-carboxylase] ligase	88.9	74.0	39.3
MGA_586	LOCUS_05850	sequence11:1169..1792(-)	partial			WP_011101504.1	4'-phosphopantetheinyl transferase superfamily protein	65.2	71.0	35.3
MGA_624	LOCUS_06230	sequence11:36119..37336(-)	partial			WP_009925167.1	C39 family peptidase	38.3	57.5	52.9
MGA_686	LOCUS_06840	sequence13:34750..35751(+)	partial			WP_011962649.1	hypothetical protein	94.6	71.0	31.5
MGA_691	LOCUS_06890	sequence14:5914..6888(+)	partial			WP_001158086.1	molybdopterin-synthase adenylyltransferase MoeB	64.5	60.5	31.3
MGA_694	LOCUS_06920	sequence14:8997..12665(+)	partial			WP_011109529.1	BspA family leucine-rich repeat surface protein	30.6	36.3	46.7
MGA_705	LOCUS_07030	sequence14:19047..19304(-)	internal_stop_codon	19047..19049(-)		WP_001293546.1	helix-turn-helix domain-containing protein	95.3	65.3	56.8
MGA_719	LOCUS_07170	sequence14:30343..31704(-)	partial			WP_003548412.1	SLAP domain-containing protein	68.2	39.9	27.2
MGA_720	LOCUS_07180	sequence14:31759..32265(-)	partial			WP_003548607.1	energy-coupling factor transporter transmembrane component T	95.8	74.2	72.0
MGA_741	LOCUS_07380	sequence15:17484..18026(-)	internal_stop_codon	18042..18044(-)		WP_002358972.1	RloB family protein	100.0	84.3	26.3
MGA_745	LOCUS_07420	sequence15:21636..22499(-)	partial			WP_012257624.1	amidohydrolase	94.4	51.2	33.5
MGA_746	LOCUS_07430	sequence15:22514..23263(-)	partial			WP_011071259.1	amidohydrolase	72.7	31.1	33.2
MGA_766	LOCUS_07630	sequence16:11637..11864(-)	partial			WP_003548471.1	PspC domain-containing protein	81.3	56.0	72.1
MGA_802	LOCUS_07990	sequence17:14419..15072(-)	internal_stop_codon	15157..15159(-)		WP_007058870.1	DEAD/DEAH box helicase	97.2	16.2	48.9
MGA_803	LOCUS_08000	sequence17:15157..17988(-)	internal_stop_codon	15157..15159(-)		WP_011986302.1	SNF2 helicase associated domain-containing protein	71.4	63.5	29.7
MGA_845	LOCUS_08410	sequence19:1567..2034(+)	frameshift		2016	WP_011254214.1	competence protein CoiA family protein	97.4	52.6	66.9
MGA_865	LOCUS_08610	sequence19:24047..25105(+)	partial			WP_003546527.1	helix-turn-helix domain-containing protein	75.9	73.5	62.5
MGA_874	LOCUS_08700	sequence20:4904..5341(+)	partial			WP_011102179.1	Fic family protein	91.0	73.9	28.4
MGA_877	LOCUS_08730	sequence20:6084..6272(+)	frameshift		6266	WP_010906025.1	SDR family oxidoreductase	96.8	24.0	58.3
MGA_878	LOCUS_08740	sequence20:6359..6829(+)	frameshift		6266	WP_003644758.1	SDR family oxidoreductase	98.7	62.3	71.4
MGA_880	LOCUS_08760	sequence20:7265..7558(+)	partial			WP_003565067.1	carboxymuconolactone decarboxylase family protein	71.1	66.7	67.1
MGA_922	LOCUS_09170	sequence21:18779..19330(-)	internal_stop_codon	19346..19348(-)		WP_003641832.1	DUF2252 domain-containing protein	94.0	38.4	55.5
MGA_923	LOCUS_09180	sequence21:19346..20188(-)	internal_stop_codon	19346..19348(-)		WP_003641832.1	DUF2252 domain-containing protein	89.6	55.8	37.1
MGA_985	LOCUS_09800	sequence24:1464..2105(-)	frameshift		2113	WP_011476612.1	ArdC-like ssDNA-binding domain-containing protein	79.8	14.6	41.9
MGA_991	LOCUS_09860	sequence24:10412..11443(-)	frameshift		11475,11444	WP_002456327.1	fructose-specific PTS transporter subunit EIIC	85.7	47.5	41.0
MGA_1011	LOCUS_10060	sequence24:25191..25994(-)	partial			WP_010989904.1	PRD domain-containing protein	88.0	49.9	36.0
MGA_1052	LOCUS_10470	sequence26:13508..13849(+)	frameshift		13846	WP_011102240.1	DeoR/GlpR family DNA-binding transcription regulator	100.0	44.0	44.7
MGA_1053	LOCUS_10480	sequence26:13860..14276(+)	frameshift		13840	WP_011169330.1	DeoR/GlpR family transcriptional regulator	97.8	53.0	33.8
MGA_1061	LOCUS_10560	sequence26:21570..23063(-)	partial			WP_003548412.1	SLAP domain-containing protein	75.7	52.9	31.3
MGA_1105	LOCUS_10990	sequence28:14842..14988(+)	partial			WP_011254524.1	Rib/alpha-like domain-containing protein	85.4	2.0	75.6
MGA_1106	LOCUS_11000	sequence28:15447..16739(+)	partial			WP_011109529.1	BspA family leucine-rich repeat surface protein	43.5	17.9	41.7
MGA_1111	LOCUS_11040	sequence29:3527..4108(+)	partial			WP_015613359.1	hypothetical protein	75.1	74.5	55.8
MGA_1119	LOCUS_11120	sequence29:11432..11623(-)	internal_stop_codon	11669..11671(-)		WP_011101571.1	restriction endonuclease	98.4	21.2	40.9
MGA_1122	LOCUS_11150	sequence29:12439..12822(-)	internal_stop_codon	12439..12441(-)		WP_003546324.1	GNAT family N-acetyltransferase	95.3	71.7	45.5
MGA_1125	LOCUS_11180	sequence29:15023..15412(-)	partial			WP_003568116.1	NUDIX domain-containing protein	94.6	50.2	64.8
MGA_1127	LOCUS_11200	sequence29:16606..17013(-)	frameshift		17008	WP_081512349.1	ISL3 family transposase	83.7	27.0	53.4
MGA_1128	LOCUS_11210	sequence29:16997..17929(-)	frameshift		17008	WP_011475678.1	ISL3 family transposase	99.0	71.3	47.3
MGA_1130	LOCUS_11230	sequence29:18494..19000(-)	frameshift		18989	WP_011101571.1	restriction endonuclease	98.2	53.4	47.0
MGA_1132	LOCUS_11250	sequence29:20260..20922(-)	internal_stop_codon	20260..20262(-)		WP_003688752.1	IS3 family transposase	99.5	75.0	97.3
MGA_1147	LOCUS_11400	sequence30:18014..18577(-)	frameshift,internal_stop_codon	18641..18643(-),18596..18598(-)	17872,18094	WP_011476434.1	glycoside hydrolase family 3 N-terminal domain-containing protein	85.6	43.6	55.0
MGA_1179	LOCUS_11720	sequence32:11745..12224(+)	partial			WP_003549992.1	amino acid ABC transporter permease	98.7	73.0	84.1
MGA_1227	LOCUS_12200	sequence35:6716..7711(-)	partial			WP_003548276.1	YfhO family protein	98.5	38.2	41.2
MGA_1252	LOCUS_12450	sequence36:13514..16375(+)	partial			WP_011254525.1	MMPL family transporter	71.5	51.2	62.5
MGA_1258	LOCUS_12510	sequence37:4577..4759(-)	frameshift		4845	WP_003644757.1	ABC transporter permease	95.0	14.1	45.6
MGA_1259	LOCUS_12520	sequence37:5115..5795(-)	frameshift		5129	WP_011476016.1	ABC transporter permease	99.1	55.2	43.2
MGA_1261	LOCUS_12540	sequence37:6806..7522(-)	frameshift		7722	WP_003546206.1	SEC10/PgrA surface exclusion domain-containing protein	100.0	67.0	63.2
MGA_1284	LOCUS_12760	sequence39:1244..2320(-)	frameshift		2342	WP_000032676.1	PTS sugar transporter subunit IIC	99.2	81.5	35.1
MGA_1293	LOCUS_12850	sequence39:11496..12425(-)	partial			WP_003548886.1	SLAP domain-containing protein	60.8	34.8	32.7
MGA_1295	LOCUS_12870	sequence39:13942..14718(-)	partial			WP_003548886.1	SLAP domain-containing protein	35.3	15.3	47.3
MGA_1297	LOCUS_12880	sequence40:312..779(+)	partial			WP_003546774.1	DNA repair protein RadC	81.3	60.9	38.9
MGA_1311	LOCUS_13020	sequence40:11143..11310(-)	partial			WP_165492900.1	IS3 family transposase	92.7	12.9	48.1
MGA_1314	LOCUS_13050	sequence40:12561..12977(+)	partial			WP_011254231.1	beta-glucoside-specific PTS transporter subunit IIABC	92.0	19.3	48.4
MGA_1324	LOCUS_13150	sequence41:7184..7720(-)	partial			WP_010890731.1	TetR-like C-terminal domain-containing protein	62.9	59.6	33.6
MGA_1377	LOCUS_13650	sequence46:35..658(+)	partial			WP_011674851.1	FMN-binding protein	83.6	56.6	57.8
MGA_1413	LOCUS_14000	sequence49:9435..9656(+)	partial			WP_003640442.1	DUF805 domain-containing protein	74.0	44.6	66.7
MGA_1414	LOCUS_14010	sequence50:36..293(-)	partial			WP_011254524.1	Rib/alpha-like domain-containing protein	88.2	4.2	50.6
MGA_1424	LOCUS_14110	sequence51:1734..2108(-)	partial			WP_003549842.1	DUF2187 family protein	64.5	78.8	77.5
MGA_1430	LOCUS_14170	sequence51:5615..6298(+)	internal_stop_codon	6296..6298(+)		WP_007056552.1	ATP-binding protein	99.6	62.2	29.4
MGA_1431	LOCUS_14180	sequence51:6311..6703(+)	internal_stop_codon	6296..6298(+)		WP_007056552.1	ATP-binding protein	93.8	34.0	33.3
MGA_1452	LOCUS_14380	sequence54:814..1224(+)	internal_stop_codon	1222..1224(+)		WP_003646310.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	95.6	47.4	52.3
MGA_1453	LOCUS_14390	sequence54:1297..1638(+)	internal_stop_codon	1222..1224(+)		WP_003646310.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	100.0	40.9	49.1
MGA_1460	LOCUS_14460	sequence54:5965..6741(-)	partial			WP_004114774.1	ABC transporter ATP-binding protein	91.5	64.7	39.9
MGA_1463	LOCUS_14490	sequence55:508..1380(-)	frameshift		1439	WP_011254239.1	MFS transporter	98.3	61.9	50.3
MGA_1464	LOCUS_14500	sequence55:1401..1901(-)	frameshift		1439	WP_011254239.1	MFS transporter	93.4	33.5	66.5
MGA_1466	LOCUS_14520	sequence55:3446..3727(-)	partial			WP_011254238.1	VanZ family protein	94.6	44.0	65.9
MGA_1488	LOCUS_14730	sequence58:5621..5797(+)	internal_stop_codon	5795..5797(+)		WP_011254019.1	peptide deformylase	100.0	42.3	62.1
MGA_1489	LOCUS_14740	sequence58:5810..6022(+)	internal_stop_codon	5795..5797(+)		WP_011254019.1	peptide deformylase	100.0	51.1	55.7
MGA_1491	LOCUS_14750	sequence59:884..5071(-)	partial			WP_011102048.1	BspA family leucine-rich repeat surface protein	20.1	36.9	27.6
MGA_1492	LOCUS_14760	sequence60:1..540(+)	partial			WP_003548795.1	beta-N-acetylglucosaminidase AcmB	64.2	29.3	45.8
MGA_1511	LOCUS_14940	sequence64:2339..2566(+)	frameshift		2551	WP_013097450.1	PTS transporter subunit EIIC	80.0	13.6	58.3
MGA_1512	LOCUS_14950	sequence64:2595..3017(+)	frameshift,internal_stop_codon	3015..3017(+)	2551	WP_013097450.1	PTS transporter subunit EIIC	100.0	31.8	50.7
MGA_1513	LOCUS_14960	sequence64:3051..3608(+)	internal_stop_codon	3015..3017(+)		WP_013097450.1	PTS transporter subunit EIIC	95.1	40.0	64.8
MGA_1528	LOCUS_15090	sequence69:1900..2355(+)	partial			WP_010965612.1	dTDP-4-dehydrorhamnose reductase	90.1	42.5	36.8
MGA_1544	LOCUS_15200	sequence75:1111..1587(+)	partial			WP_010964041.1	TetR/AcrR family transcriptional regulator	73.4	62.7	38.8
MGA_1548	LOCUS_15210	sequence78:1..1113(+)	partial			WP_011254604.1	RNA-guided endonuclease TnpB family protein	57.8	69.4	44.4
MGA_1549	LOCUS_15220	sequence79:53..700(-)	partial			WP_010989904.1	PRD domain-containing protein	92.1	40.2	32.7
MGA_1559	LOCUS_15250	sequence87:1..532(+)	frameshift		493	WP_165492900.1	IS3 family transposase	65.9	29.5	68.9