{ "type": "genome", "identifier": "GCF_014651135.1", "organism": "Streptomyces echinoruber", "title": "Streptomyces echinoruber", "description": "na", "data type": "Genome sequencing and assembly", "organization": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014651135.1", "bioproject": "PRJNA224116", "biosample": "SAMD00245545", "wgs_master": "BMWH00000000.1", "refseq_category": "reference genome", "taxid": "68898", "species_taxid": "68898", "organism_name": "Streptomyces echinoruber", "infraspecific_name": "strain=JCM 5016", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/09/12", "asm_name": "ASM1465113v1", "asm_submitter": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "gbrs_paired_asm": "GCA_014651135.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/651/135/GCF_014651135.1_ASM1465113v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7356931", "genome_size_ungapped": "7356015", "gc_percent": "73.000000", "replicon_count": "0", "scaffold_count": "108", "contig_count": "108", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014651135.1-RS_2024_09_02", "annotation_date": "2024-09-02", "total_gene_count": "6621", "protein_coding_gene_count": "6317", "non_coding_gene_count": "76", "pubmed_id": "30832757" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-09-12", "dateModified": "2020-09-12", "datePublished": "2020-09-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces echinoruber" ], "sample_taxid": [ "68898" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not applicable" ], "sample_host_location_id": [], "data_size": "1.953 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 1.04, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "7356931", "Number of Sequences": "108", "Longest Sequences (bp)": "696357", "N50 (bp)": "181340", "Gap Ratio (%)": "0.012614", "GCcontent (%)": "73.2", "Number of CDSs": "6669", "Average Protein Length": "311.1", "Coding Ratio (%)": "84.6", "Number of rRNAs": "1", "Number of tRNAs": "88", "Number of CRISPRs": "7" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Streptomyces echinoruber", "strain": "strain=JCM 5016", "accession": "GCA_014651135.1", "taxid": 68898, "species_taxid": 68898, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2390, "total_fragments": 2398, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptomyces sennicomposti", "strain": "strain=RCPT1-4", "accession": "GCA_019890635.1", "taxid": 2873384, "species_taxid": 2873384, "relation_to_type": "type", "validated": true, "ani": 85.2064, "matched_fragments": 1475, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces griseosporeus", "strain": "strain=JCM 4766", "accession": "GCA_014656055.1", "taxid": 1910, "species_taxid": 1910, "relation_to_type": "type", "validated": true, "ani": 85.2062, "matched_fragments": 1638, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces griseostramineus", "strain": "strain=JCM 4385", "accession": "GCA_014649635.1", "taxid": 66898, "species_taxid": 66898, "relation_to_type": "suspected-type", "validated": true, "ani": 85.1101, "matched_fragments": 1540, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces griseicoloratus", "strain": "strain=TRM S81-3", "accession": "GCA_014534645.1", "taxid": 2752516, "species_taxid": 2752516, "relation_to_type": "type", "validated": true, "ani": 85.0909, "matched_fragments": 1537, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces griseostramineus", "strain": "strain=CECT 3273", "accession": "GCA_014203535.1", "taxid": 66898, "species_taxid": 66898, "relation_to_type": "suspected-type", "validated": true, "ani": 85.0785, "matched_fragments": 1571, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces harenosi", "strain": "strain=PRKS01-65", "accession": "GCA_011008945.1", "taxid": 2697029, "species_taxid": 2697029, "relation_to_type": "type", "validated": true, "ani": 85.0763, "matched_fragments": 1359, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces leeuwenhoekii", "strain": "strain=C34", "accession": "GCA_000696595.1", "taxid": 1437453, "species_taxid": 1437453, "relation_to_type": "type", "validated": true, "ani": 85.0506, "matched_fragments": 1371, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces galbus", "strain": "strain=JCM 4639", "accession": "GCA_014650535.1", "taxid": 33898, "species_taxid": 33898, "relation_to_type": "type", "validated": true, "ani": 85.0107, "matched_fragments": 1560, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces lomondensis", "strain": "strain=DSM 41428", "accession": "GCA_021440105.1", "taxid": 68229, "species_taxid": 68229, "relation_to_type": "type", "validated": true, "ani": 84.9665, "matched_fragments": 1582, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces carpinensis", "strain": "strain=NRRL B-16921", "accession": "GCA_002154505.1", "taxid": 66369, "species_taxid": 66369, "relation_to_type": "type", "validated": true, "ani": 84.9421, "matched_fragments": 1452, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces flaveolus", "strain": "strain=JCM 4032", "accession": "GCA_014648815.1", "taxid": 67297, "species_taxid": 67297, "relation_to_type": "type", "validated": true, "ani": 84.9249, "matched_fragments": 1498, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces leeuwenhoekii", "strain": "strain=C34 (= DSM 42122 = NRRL B-24963)", "accession": "GCA_001013905.1", "taxid": 1437453, "species_taxid": 1437453, "relation_to_type": "type", "validated": true, "ani": 84.9165, "matched_fragments": 1519, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces lomondensis", "strain": "strain=JCM 4866", "accession": "GCA_014651035.1", "taxid": 68229, "species_taxid": 68229, "relation_to_type": "type", "validated": true, "ani": 84.9069, "matched_fragments": 1612, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces glaucescens", "strain": "strain=NRRL B-2706", "accession": "GCA_002154375.1", "taxid": 1907, "species_taxid": 1907, "relation_to_type": "type", "validated": true, "ani": 84.9012, "matched_fragments": 1324, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces thermodiastaticus", "strain": "strain=DSM 40573", "accession": "GCA_021394575.1", "taxid": 44061, "species_taxid": 44061, "relation_to_type": "type", "validated": true, "ani": 84.8597, "matched_fragments": 1379, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces panaciradicis", "strain": "strain=NBRC 109811", "accession": "GCA_023516615.1", "taxid": 1470261, "species_taxid": 1470261, "relation_to_type": "type", "validated": true, "ani": 84.6362, "matched_fragments": 1581, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces canarius", "strain": "strain=JCM 4733", "accession": "GCA_014650735.1", "taxid": 285453, "species_taxid": 285453, "relation_to_type": "type", "validated": true, "ani": 84.6358, "matched_fragments": 1630, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces olivaceoviridis", "strain": "strain=JCM 4499", "accession": "GCA_014650115.1", "taxid": 1921, "species_taxid": 1921, "relation_to_type": "type", "validated": true, "ani": 84.6186, "matched_fragments": 1615, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces chromofuscus", "strain": "strain=JCM 4354", "accession": "GCA_014649435.1", "taxid": 42881, "species_taxid": 42881, "relation_to_type": "type", "validated": true, "ani": 84.5581, "matched_fragments": 1558, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces fodineus", "strain": "strain=TW1S1", "accession": "GCA_001735805.1", "taxid": 1904616, "species_taxid": 1904616, "relation_to_type": "type", "validated": true, "ani": 84.3991, "matched_fragments": 1593, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces misionensis", "strain": "strain=DSM 40306", "accession": "GCA_900104815.1", "taxid": 67331, "species_taxid": 67331, "relation_to_type": "type", "validated": true, "ani": 84.3249, "matched_fragments": 1535, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces ferrugineus", "strain": "strain=CCTCC AA2014009", "accession": "GCA_015160855.1", "taxid": 1413221, "species_taxid": 1413221, "relation_to_type": "type", "validated": true, "ani": 84.2479, "matched_fragments": 1575, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces glomeratus", "strain": "strain=DSM 41457", "accession": "GCA_021462825.1", "taxid": 284452, "species_taxid": 284452, "relation_to_type": "type", "validated": true, "ani": 83.7383, "matched_fragments": 1484, "total_fragments": 2398, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 1.04, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014651135.1", "gtdb_species": "s__Streptomyces echinoruber", "ani": 100.0, "matched_fragments": 2390, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_902506575.1", "gtdb_species": "s__Streptomyces mexicanus", "ani": 85.4119, "matched_fragments": 1545, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.95", "min_intra_species_ani": "96.19", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.78", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_014650655.1", "gtdb_species": "s__Streptomyces anandii", "ani": 85.3556, "matched_fragments": 1621, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014650575.1", "gtdb_species": "s__Streptomyces naganishii", "ani": 85.3369, "matched_fragments": 1619, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002920535.1", "gtdb_species": "s__Streptomyces sp002920535", "ani": 85.2957, "matched_fragments": 1550, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009852415.1", "gtdb_species": "s__Streptomyces sp009852415", "ani": 85.2141, "matched_fragments": 1612, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014656055.1", "gtdb_species": "s__Streptomyces griseosporeus", "ani": 85.1973, "matched_fragments": 1639, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.70", "min_intra_species_ani": "98.69", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000931445.1", "gtdb_species": "s__Streptomyces cyaneogriseus", "ani": 85.1309, "matched_fragments": 1519, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 96.603, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014534645.1", "gtdb_species": "s__Streptomyces sp014534645", "ani": 85.1, "matched_fragments": 1536, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014203535.1", "gtdb_species": "s__Streptomyces griseostramineus", "ani": 85.0632, "matched_fragments": 1574, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.88", "min_intra_species_ani": "99.76", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.98", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000383935.1", "gtdb_species": "s__Streptomyces sp000383935", "ani": 85.0484, "matched_fragments": 1586, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.62", "min_intra_species_ani": "97.70", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.84", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_005280195.1", "gtdb_species": "s__Streptomyces galbus", "ani": 84.9798, "matched_fragments": 1561, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.26", "min_intra_species_ani": "98.53", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001013905.1", "gtdb_species": "s__Streptomyces leeuwenhoekii", "ani": 84.9348, "matched_fragments": 1517, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 96.603, "mean_intra_species_ani": "99.67", "min_intra_species_ani": "99.36", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_014651035.1", "gtdb_species": "s__Streptomyces lomondensis", "ani": 84.9153, "matched_fragments": 1610, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001905845.1", "gtdb_species": "s__Streptomyces sp001905845", "ani": 84.905, "matched_fragments": 1568, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017526105.1", "gtdb_species": "s__Streptomyces cyanogenus", "ani": 84.8844, "matched_fragments": 1617, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000761215.1", "gtdb_species": "s__Streptomyces glaucescens", "ani": 84.8321, "matched_fragments": 1539, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002155905.1", "gtdb_species": "s__Streptomyces tricolor", "ani": 84.7585, "matched_fragments": 1348, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.81", "min_intra_species_ani": "98.00", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.72", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000716535.1", "gtdb_species": "s__Streptomyces flaveolus_A", "ani": 84.7288, "matched_fragments": 1634, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.26", "min_intra_species_ani": "98.84", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_012034205.1", "gtdb_species": "s__Streptomyces sp012034205", "ani": 84.639, "matched_fragments": 1458, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001636945.1", "gtdb_species": "s__Streptomyces sp001636945", "ani": 84.4772, "matched_fragments": 1534, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015160855.1", "gtdb_species": "s__Streptomyces ferrugineus", "ani": 84.2864, "matched_fragments": 1569, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003384795.1", "gtdb_species": "s__Streptomyces sp003384795", "ani": 84.1894, "matched_fragments": 1591, "total_fragments": 2398, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.201, "cell_length": -0.05, "doubling_h": 0.103, "growth_tmp": 28.0, "optimum_tmp": 29.036, "optimum_ph": 7.341, "genome_size": 8292419.302, "gc_content": 71.543, "coding_genes": 7141.289, "rRNA16S_genes": 6.155, "tRNA_genes": 67.804, "gram_stain": 1.0, "sporulation": 0.958, "motility": 0.049, "range_salinity": 0.666, "facultative_respiration": 0.0, "anaerobic_respiration": 0.005, "aerobic_respiration": 0.994, "mesophilic_range_tmp": 0.98, "thermophilic_range_tmp": 0.019, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.208, "coccus_cell_shape": 0.032, "filament_cell_shape": 0.582, "coccobacillus_cell_shape": 0.098, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.076 }, "_genome_taxon": [ "Streptomyces", "echinoruber" ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }