{ "type": "genome", "identifier": "GCF_014651575.1", "organism": "Modicisalibacter luteus", "title": "Modicisalibacter luteus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014651575.1", "bioproject": "PRJNA224116", "biosample": "SAMD00245572", "wgs_master": "BMXD00000000.1", "refseq_category": "na", "taxid": "453962", "species_taxid": "453962", "organism_name": "Modicisalibacter luteus", "infraspecific_name": "strain=KCTC 12847", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/09/12", "asm_name": "ASM1465157v1", "asm_submitter": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "gbrs_paired_asm": "GCA_014651575.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/651/575/GCF_014651575.1_ASM1465157v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4546464", "genome_size_ungapped": "4543599", "gc_percent": "59.000000", "replicon_count": "0", "scaffold_count": "45", "contig_count": "45", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014651575.1-RS_2024_04_07", "annotation_date": "2024-04-07", "total_gene_count": "4300", "protein_coding_gene_count": "4136", "non_coding_gene_count": "67", "pubmed_id": "30832757" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-09-12", "dateModified": "2020-09-12", "datePublished": "2020-09-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Modicisalibacter luteus" ], "sample_taxid": [ "453962" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not applicable" ], "sample_host_location_id": [], "data_size": "1.289 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4546464", "Number of Sequences": "45", "Longest Sequences (bp)": "1031987", "N50 (bp)": "397951", "Gap Ratio (%)": "0.063016", "GCcontent (%)": "59.1", "Number of CDSs": "4274", "Average Protein Length": "307.5", "Coding Ratio (%)": "86.7", "Number of rRNAs": "2", "Number of tRNAs": "64", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Halomonas lutea", "strain": "strain=KCTC 12847", "accession": "GCA_014651575.1", "taxid": 453962, "species_taxid": 453962, 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas sulfidoxydans", "strain": "strain=MCCC 1A11059", "accession": "GCA_017868775.1", "taxid": 2733484, "species_taxid": 2733484, "relation_to_type": "type", "validated": true, "ani": 78.8514, "matched_fragments": 443, "total_fragments": 1494, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas ethanolica", "strain": "strain=MCCC 1A11081", "accession": "GCA_021404305.1", "taxid": 2733486, "species_taxid": 2733486, "relation_to_type": "type", "validated": true, "ani": 78.8212, "matched_fragments": 414, "total_fragments": 1494, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas sulfidivorans", "strain": "strain=MCCC 1A13718", "accession": "GCA_017868935.1", "taxid": 2733488, "species_taxid": 2733488, "relation_to_type": "type", "validated": true, "ani": 78.7186, "matched_fragments": 427, "total_fragments": 1494, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas tianxiuensis", "strain": "strain=BC-M4-5", "accession": "GCA_009834345.1", "taxid": 2497861, "species_taxid": 2497861, "relation_to_type": "type", "validated": true, "ani": 78.6959, "matched_fragments": 434, "total_fragments": 1494, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas antri", "strain": "strain=Y3S6", "accession": "GCA_019430905.1", "taxid": 2846777, "species_taxid": 2846777, "relation_to_type": "type", "validated": true, "ani": 78.6795, "matched_fragments": 413, "total_fragments": 1494, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas gudaonensis", "strain": "strain=CGMCC 1.6133", "accession": "GCA_900100195.1", "taxid": 376427, "species_taxid": 376427, "relation_to_type": "type", "validated": true, "ani": 78.3537, "matched_fragments": 389, "total_fragments": 1494, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, 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