{
    "type": "genome",
    "identifier": "GCF_014651595.1",
    "organism": "Pseudovibrio japonicus",
    "title": "Pseudovibrio japonicus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_014651595.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00245573",
        "wgs_master": "BMXE00000000.1",
        "refseq_category": "reference genome",
        "taxid": "366534",
        "species_taxid": "366534",
        "organism_name": "Pseudovibrio japonicus",
        "infraspecific_name": "strain=KCTC 12861",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/09/12",
        "asm_name": "ASM1465159v1",
        "asm_submitter": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)",
        "gbrs_paired_asm": "GCA_014651595.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/651/595/GCF_014651595.1_ASM1465159v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4960757",
        "genome_size_ungapped": "4960706",
        "gc_percent": "52.500000",
        "replicon_count": "0",
        "scaffold_count": "25",
        "contig_count": "25",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_014651595.1-RS_2024_08_26",
        "annotation_date": "2024-08-26",
        "total_gene_count": "4532",
        "protein_coding_gene_count": "4420",
        "non_coding_gene_count": "72",
        "pubmed_id": "30832757"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-09-12",
    "dateModified": "2020-09-12",
    "datePublished": "2020-09-12",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pseudovibrio japonicus"
        ],
        "sample_taxid": [
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        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not applicable"
        ],
        "sample_host_location_id": [],
        "data_size": "1.416 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4960757",
        "Number of Sequences": "25",
        "Longest Sequences (bp)": "1062011",
        "N50 (bp)": "642972",
        "Gap Ratio (%)": "0.001028",
        "GCcontent (%)": "52.7",
        "Number of CDSs": "4476",
        "Average Protein Length": "308.7",
        "Coding Ratio (%)": "83.6",
        "Number of rRNAs": "4",
        "Number of tRNAs": "63",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Pseudovibrio japonicus",
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            },
            {
                "organism_name": "Pseudovibrio denitrificans",
                "strain": "strain=DSM 17465",
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                "species_taxid": 258256,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Pseudovibrio brasiliensis",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "ani": 83.6427,
                "matched_fragments": 1128,
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_018282095.1",
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                "matched_fragments": 1154,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudovibrio ascidiaceicola",
                "strain": "strain=DSM 16392",
                "accession": "GCA_900114245.1",
                "taxid": 285279,
                "species_taxid": 285279,
                "relation_to_type": "type",
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                "ani": 83.268,
                "matched_fragments": 1147,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudovibrio flavus",
                "strain": "strain=RKSG542",
                "accession": "GCA_009711345.1",
                "taxid": 2529854,
                "species_taxid": 2529854,
                "relation_to_type": "type",
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                "ani": 78.1631,
                "matched_fragments": 247,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseibium limicola",
                "strain": "strain=CAU 1637",
                "accession": "GCA_017313085.1",
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                "species_taxid": 2816037,
                "relation_to_type": "type",
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                "status": "below_threshold"
            }
        ],
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Stappiaceae;g__Pseudovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Stappiaceae;g__Pseudovibrio",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Stappiaceae;g__Pseudovibrio",
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            },
            {
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        "bacillus_cell_shape": 1.0,
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    "_genome_taxon": [
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        "japonicus"
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}