{ "tc_result": [ { "organism_name": "Paludibacterium paludis", "strain": "strain=KCTC 32182", "accession": "GCA_014652495.1", "taxid": 1225769, "species_taxid": 1225769, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1304, "total_fragments": 1307, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Paludibacterium paludis", "strain": "strain=BCRC 80514", "accession": "GCA_018802605.1", "taxid": 1225769, "species_taxid": 1225769, "relation_to_type": "type", "validated": true, "ani": 99.998, "matched_fragments": 1307, "total_fragments": 1307, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Chromobacterium violaceum", "strain": "strain=ATCC 12472", "accession": "GCA_000007705.1", "taxid": 536, "species_taxid": 536, "relation_to_type": "type", "validated": true, "ani": 79.3451, "matched_fragments": 494, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium violaceum", "strain": "strain=NCTC9757", "accession": "GCA_900446805.1", "taxid": 536, "species_taxid": 536, "relation_to_type": "type", "validated": true, "ani": 79.2957, "matched_fragments": 493, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Crenobacter luteus", "strain": "strain=DSM 27258", "accession": "GCA_004345725.1", "taxid": 1452487, "species_taxid": 1452487, "relation_to_type": "type", "validated": true, "ani": 79.2555, "matched_fragments": 388, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium vaccinii", "strain": "strain=MWU205", "accession": "GCA_000971335.1", "taxid": 1108595, "species_taxid": 1108595, "relation_to_type": "type", "validated": true, "ani": 79.24, "matched_fragments": 457, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium sinusclupearum", "strain": "strain=MWU13-2610", "accession": "GCA_002902845.1", "taxid": 2077146, "species_taxid": 2077146, "relation_to_type": "type", "validated": true, "ani": 79.2016, "matched_fragments": 429, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium alkanivorans", "strain": "strain=IITR-71", "accession": "GCA_016937655.1", "taxid": 1071719, "species_taxid": 1071719, "relation_to_type": "type", "validated": true, "ani": 79.1976, "matched_fragments": 491, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Crenobacter cavernae", "strain": "strain=K1W11S-77", "accession": "GCA_003355495.1", "taxid": 2290923, "species_taxid": 2290923, "relation_to_type": "type", "validated": true, "ani": 79.0642, "matched_fragments": 340, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium amazonense", "strain": "strain=DSM 26508", "accession": "GCA_001855565.1", "taxid": 1382803, "species_taxid": 1382803, "relation_to_type": "type", "validated": true, "ani": 78.9955, "matched_fragments": 442, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium piscinae", "strain": "strain=DSM 23278", "accession": "GCA_021129175.1", "taxid": 686831, "species_taxid": 686831, "relation_to_type": "type", "validated": true, "ani": 78.9808, "matched_fragments": 470, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium aquaticum", "strain": "strain=DSM 19852", "accession": "GCA_021129195.1", "taxid": 467180, "species_taxid": 467180, "relation_to_type": "type", "validated": true, "ani": 78.978, "matched_fragments": 466, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium alticapitis", "strain": "strain=MWU14-2602", "accession": "GCA_002924365.1", "taxid": 2073169, "species_taxid": 2073169, "relation_to_type": "type", "validated": true, "ani": 78.9222, "matched_fragments": 430, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium phragmitis", "strain": "strain=IIBBL 112-1", "accession": "GCA_003325475.1", "taxid": 2202141, "species_taxid": 2202141, "relation_to_type": "type", "validated": true, "ani": 78.908, "matched_fragments": 455, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paludibacterium purpuratum", "strain": "strain=CECT 8976", "accession": "GCA_004363805.1", "taxid": 1144873, "species_taxid": 1144873, "relation_to_type": "type", "validated": true, "ani": 78.9076, "matched_fragments": 349, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium sphagni", "strain": "strain=IIBBL 14B-1", "accession": "GCA_001855555.1", "taxid": 1903179, "species_taxid": 1903179, "relation_to_type": "type", "validated": true, "ani": 78.7479, "matched_fragments": 473, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paludibacterium yongneupense", "strain": "strain=DSM 18731", "accession": "GCA_000422925.1", "taxid": 400061, "species_taxid": 400061, "relation_to_type": "type", "validated": true, "ani": 78.5287, "matched_fragments": 334, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquitalea denitrificans", "strain": "strain=5YN1-3", "accession": "GCA_009856625.1", "taxid": 519081, "species_taxid": 519081, "relation_to_type": "type", "validated": true, "ani": 78.3563, "matched_fragments": 322, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gulbenkiania indica", "strain": "strain=DSM 17901", "accession": "GCA_001418035.1", "taxid": 375574, "species_taxid": 375574, "relation_to_type": "type", "validated": true, "ani": 78.1503, "matched_fragments": 315, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia terrae", "strain": "strain=JCM 31606", "accession": "GCA_024753145.1", "taxid": 1811224, "species_taxid": 1811224, "relation_to_type": "type", "validated": true, "ani": 76.5566, "matched_fragments": 183, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_018802605.1", "gtdb_species": "s__Paludibacterium paludis", "ani": 99.998, "matched_fragments": 1307, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Paludibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCA_018260425.1", "gtdb_species": "s__Paludibacterium sp018260425", "ani": 80.1708, "matched_fragments": 585, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Paludibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000527175.1", "gtdb_species": "s__Pseudogulbenkiania sp000527175", "ani": 79.4618, "matched_fragments": 413, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Pseudogulbenkiania", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000007705.1", "gtdb_species": "s__Chromobacterium violaceum", "ani": 79.3668, "matched_fragments": 493, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.58", "min_intra_species_ani": "98.16", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 26, "status": "-" }, { "accession": "GCA_002213445.1", "gtdb_species": "s__Chromobacterium sp002213445", "ani": 79.3111, "matched_fragments": 458, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.12", "min_intra_species_ani": "99.12", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001676875.1", "gtdb_species": "s__Chromobacterium subtsugae", "ani": 79.2631, "matched_fragments": 473, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.12", "min_intra_species_ani": "98.52", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_000971335.1", "gtdb_species": "s__Chromobacterium vaccinii", "ani": 79.255, "matched_fragments": 459, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.63", "min_intra_species_ani": "98.56", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_008275125.1", "gtdb_species": "s__Chromobacterium paludis", "ani": 79.2523, "matched_fragments": 450, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004345725.1", "gtdb_species": "s__Crenobacter luteus", "ani": 79.2458, "matched_fragments": 390, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Crenobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.88", "min_intra_species_ani": "98.88", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003355495.1", "gtdb_species": "s__Crenobacter cavernae", "ani": 79.0603, "matched_fragments": 339, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Crenobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.17", "min_intra_species_ani": "96.17", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900177275.1", "gtdb_species": "s__Pseudogulbenkiania subflava", "ani": 79.0579, "matched_fragments": 413, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Pseudogulbenkiania", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000174355.1", "gtdb_species": "s__Pseudogulbenkiania ferrooxidans_A", "ani": 79.0299, "matched_fragments": 422, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Pseudogulbenkiania", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.29", "min_intra_species_ani": "97.29", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_011601295.1", "gtdb_species": "s__Chromobacterium vaccinii_A", "ani": 78.9964, "matched_fragments": 487, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.84", "min_intra_species_ani": "95.77", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003052555.1", "gtdb_species": "s__Chromobacterium sp003052555", "ani": 78.9672, "matched_fragments": 468, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003325475.1", "gtdb_species": "s__Chromobacterium phragmitis", "ani": 78.9233, "matched_fragments": 454, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.00", "min_intra_species_ani": "99.00", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004363805.1", "gtdb_species": "s__Paludibacterium purpuratum", "ani": 78.9195, "matched_fragments": 348, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Paludibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019232825.1", "gtdb_species": "s__Paludibacterium sp019232825", "ani": 78.8206, "matched_fragments": 354, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Paludibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.73", "min_intra_species_ani": "99.73", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_018802765.1", "gtdb_species": "s__Paludibacterium sp018802765", "ani": 78.7679, "matched_fragments": 355, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Paludibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001855555.1", "gtdb_species": "s__Chromobacterium sphagni", "ani": 78.7478, "matched_fragments": 473, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.33", "min_intra_species_ani": "99.33", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000422925.1", "gtdb_species": "s__Paludibacterium yongneupense", "ani": 78.5044, "matched_fragments": 336, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Paludibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009856625.1", "gtdb_species": "s__Aquitalea denitrificans", "ani": 78.3324, "matched_fragments": 324, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Aquitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004346645.1", "gtdb_species": "s__Gulbenkiania mobilis", "ani": 78.2925, "matched_fragments": 300, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Gulbenkiania", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.11", "min_intra_species_ani": "99.06", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" } ] }