{ "tc_result": [ { "organism_name": "Nocardioides flavus Wang et al. 2016", "strain": "strain=CGMCC 1.12791", "accession": "GCA_014653115.1", "taxid": 2058780, "species_taxid": 2058780, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1373, "total_fragments": 1374, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Nocardioides ganghwensis", "strain": "strain=9920", "accession": "GCA_014779655.1", "taxid": 252230, "species_taxid": 252230, "relation_to_type": "type", "validated": true, "ani": 89.1401, "matched_fragments": 1098, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides eburneiflavus", "strain": "strain=MMS17-SY213", "accession": "GCA_004785795.1", "taxid": 2518372, "species_taxid": 2518372, "relation_to_type": "type", "validated": true, "ani": 88.7097, "matched_fragments": 1060, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides lacusdianchii", "strain": "strain=JXJ CY 38", "accession": "GCA_020102855.1", "taxid": 2783664, "species_taxid": 2783664, "relation_to_type": "type", "validated": true, "ani": 86.4211, "matched_fragments": 1046, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides cavernae", "strain": "strain=KCTC 39551", "accession": "GCA_014779675.1", "taxid": 1921566, "species_taxid": 1921566, "relation_to_type": "type", "validated": true, "ani": 86.3662, "matched_fragments": 999, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides cavernae", "strain": "strain=DSM 29950", "accession": "GCA_016907475.1", "taxid": 1921566, "species_taxid": 1921566, "relation_to_type": "type", "validated": true, "ani": 86.3455, "matched_fragments": 995, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides furvisabuli", "strain": "strain=JCM 13813", "accession": "GCA_021083185.1", "taxid": 375542, "species_taxid": 375542, "relation_to_type": "type", "validated": true, "ani": 86.2108, "matched_fragments": 969, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides okcheonensis", "strain": "strain=MMS20-HV4-12", "accession": "GCA_020991065.1", "taxid": 2894081, "species_taxid": 2894081, "relation_to_type": "type", "validated": true, "ani": 85.6013, "matched_fragments": 981, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides baculatus", "strain": "strain=G10", "accession": "GCA_016735675.1", "taxid": 2801337, "species_taxid": 2801337, "relation_to_type": "type", "validated": true, "ani": 85.4451, "matched_fragments": 988, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides alpinus", "strain": "strain=CGMCC 1.10697", "accession": "GCA_900112035.1", "taxid": 748909, "species_taxid": 748909, "relation_to_type": "type", "validated": true, "ani": 85.4401, "matched_fragments": 970, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides exalbidus", "strain": "strain=DSM 22017", "accession": "GCA_900105585.1", "taxid": 402596, "species_taxid": 402596, "relation_to_type": "type", "validated": true, "ani": 85.3825, "matched_fragments": 959, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides zhouii", "strain": "strain=HLT2-9", "accession": "GCA_004137345.1", "taxid": 1168729, "species_taxid": 1168729, "relation_to_type": "type", "validated": true, "ani": 85.3148, "matched_fragments": 958, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014653115.1", "gtdb_species": "s__Nocardioides flavus", "ani": 100.0, "matched_fragments": 1373, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_014779655.1", "gtdb_species": "s__Nocardioides ganghwensis", "ani": 89.1337, "matched_fragments": 1099, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004785795.1", "gtdb_species": "s__Nocardioides eburneiflavus", "ani": 88.6898, "matched_fragments": 1063, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017310035.1", "gtdb_species": "s__Nocardioides sp017310035", "ani": 86.6739, "matched_fragments": 1040, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013155335.1", "gtdb_species": "s__Nocardioides sp013155335", "ani": 86.5968, "matched_fragments": 1023, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009699265.1", "gtdb_species": "s__Nocardioides sp009699265", "ani": 86.4449, "matched_fragments": 970, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016907475.1", "gtdb_species": "s__Nocardioides cavernae", "ani": 86.3021, "matched_fragments": 999, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001428125.1", "gtdb_species": "s__Nocardioides sp001428125", "ani": 86.0739, "matched_fragments": 978, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017086465.1", "gtdb_species": "s__Nocardioides sp014265965", "ani": 86.0083, "matched_fragments": 954, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_017916455.1", "gtdb_species": "s__Nocardioides sp017916455", "ani": 85.7479, "matched_fragments": 899, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.92", "min_intra_species_ani": "98.92", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013155375.1", "gtdb_species": "s__Nocardioides sp013155375", "ani": 85.6795, "matched_fragments": 959, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018275325.1", "gtdb_species": "s__Nocardioides sp018275325", "ani": 85.6538, "matched_fragments": 993, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004137255.1", "gtdb_species": "s__Nocardioides oleivorans", "ani": 85.4015, "matched_fragments": 930, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900105585.1", "gtdb_species": "s__Nocardioides exalbidus", "ani": 85.3706, "matched_fragments": 960, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004137345.1", "gtdb_species": "s__Nocardioides sp004137345", "ani": 85.2635, "matched_fragments": 963, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017872795.1", "gtdb_species": "s__Nocardioides sp017872795", "ani": 85.0398, "matched_fragments": 947, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016213595.1", "gtdb_species": "s__Fen-668 sp016213595", "ani": 78.3063, "matched_fragments": 176, "total_fragments": 1374, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Propionibacteriaceae;g__Fen-668", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }