{ "tc_result": [ { "organism_name": "Sphingobacterium griseoflavum", "strain": "strain=CGMCC 1.12966", "accession": "GCA_014653155.1", "taxid": 1474952, "species_taxid": 1474952, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1461, "total_fragments": 1463, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Sphingobacterium paludis", "strain": "strain=CGMCC 1.12801", "accession": "GCA_004364125.1", "taxid": 1476465, "species_taxid": 1476465, "relation_to_type": "type", "validated": true, "ani": 78.8498, "matched_fragments": 402, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium deserti", "strain": "strain=ACCC 05744", "accession": "GCA_000757725.1", "taxid": 1229276, "species_taxid": 1229276, "relation_to_type": "type", "validated": true, "ani": 78.7379, "matched_fragments": 383, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium wenxiniae", "strain": "strain=DSM 22789", "accession": "GCA_900116225.1", "taxid": 683125, "species_taxid": 683125, "relation_to_type": "type", "validated": true, "ani": 78.5231, "matched_fragments": 150, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium psychroaquaticum", "strain": "strain=DSM 22418", "accession": "GCA_900177625.1", "taxid": 561061, "species_taxid": 561061, "relation_to_type": "type", "validated": true, "ani": 78.4445, "matched_fragments": 161, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium bovisgrunnientis", "strain": "strain=KCTC 52685", "accession": "GCA_009829085.1", "taxid": 1874697, "species_taxid": 1874697, "relation_to_type": "type", "validated": true, "ani": 78.3741, "matched_fragments": 93, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium cavernae", "strain": "strain=5.0403-2", "accession": "GCA_008520265.1", "taxid": 2592657, "species_taxid": 2592657, "relation_to_type": "type", "validated": true, "ani": 78.3568, "matched_fragments": 95, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium composti Ten et al. 2007 non Yoo et al. 2007", "strain": "strain=KCTC 12578", "accession": "GCA_009829075.1", "taxid": 363260, "species_taxid": 363260, "relation_to_type": "type", "validated": true, "ani": 78.3196, "matched_fragments": 87, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium phlebotomi", "strain": "strain=SSI9", "accession": "GCA_008180195.1", "taxid": 2605433, "species_taxid": 2605433, "relation_to_type": "type", "validated": true, "ani": 78.2393, "matched_fragments": 163, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium lactis", "strain": "strain=DSM 22361", "accession": "GCA_011046555.1", "taxid": 797291, "species_taxid": 797291, "relation_to_type": "type", "validated": true, "ani": 78.2042, "matched_fragments": 103, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium lactis", "strain": "strain=DSM 22361", "accession": "GCA_900107985.1", "taxid": 797291, "species_taxid": 797291, "relation_to_type": "type", "validated": true, "ani": 78.1026, "matched_fragments": 104, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium olei", "strain": "strain=HAL-9", "accession": "GCA_005048855.1", "taxid": 2571155, "species_taxid": 2571155, "relation_to_type": "type", "validated": true, "ani": 78.0942, "matched_fragments": 113, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium arenae", "strain": "strain=KCTC 32294", "accession": "GCA_014692505.1", "taxid": 1280598, "species_taxid": 1280598, "relation_to_type": "type", "validated": true, "ani": 78.0495, "matched_fragments": 146, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium chuzhouense", "strain": "strain=KCTC 42746", "accession": "GCA_014692525.1", "taxid": 1742264, "species_taxid": 1742264, "relation_to_type": "type", "validated": true, "ani": 78.0374, "matched_fragments": 184, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium spiritivorum", "strain": "strain=ATCC 33861", "accession": "GCA_000143765.1", "taxid": 258, "species_taxid": 258, "relation_to_type": "suspected-type", "validated": true, "ani": 77.9495, "matched_fragments": 98, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium spiritivorum", "strain": "strain=FDAARGOS_1144", "accession": "GCA_016725645.1", "taxid": 258, "species_taxid": 258, "relation_to_type": "suspected-type", "validated": true, "ani": 77.9281, "matched_fragments": 98, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium spiritivorum", "strain": "strain=NCTC11386", "accession": "GCA_900457435.1", "taxid": 258, "species_taxid": 258, "relation_to_type": "suspected-type", "validated": true, "ani": 77.9078, "matched_fragments": 98, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium paucimobilis", "strain": "strain=HER1398", "accession": "GCA_000416985.1", "taxid": 1385985, "species_taxid": 1385985, "relation_to_type": "type", "validated": true, "ani": 77.7648, "matched_fragments": 104, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium faecale", "strain": "strain=C459-1", "accession": "GCA_016746095.1", "taxid": 2803775, "species_taxid": 2803775, "relation_to_type": "type", "validated": true, "ani": 77.7455, "matched_fragments": 91, "total_fragments": 1463, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014653155.1", "gtdb_species": "s__Sphingobacterium griseoflavum", "ani": 100.0, "matched_fragments": 1461, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_004364125.1", "gtdb_species": "s__Sphingobacterium paludis", "ani": 78.8609, "matched_fragments": 401, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000757725.1", "gtdb_species": "s__Sphingobacterium deserti", "ani": 78.7492, "matched_fragments": 382, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016725325.1", "gtdb_species": "s__Sphingobacterium sp002418355", "ani": 78.7164, "matched_fragments": 94, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.65", "min_intra_species_ani": "97.65", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900116225.1", "gtdb_species": "s__Sphingobacterium wenxiniae", "ani": 78.4966, "matched_fragments": 151, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008520265.1", "gtdb_species": "s__Sphingobacterium cavernae", "ani": 78.4531, "matched_fragments": 92, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 96.1642, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900177625.1", "gtdb_species": "s__Sphingobacterium psychroaquaticum", "ani": 78.4385, "matched_fragments": 160, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.08", "min_intra_species_ani": "99.08", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009829085.1", "gtdb_species": "s__Sphingobacterium bovisgrunnientis", "ani": 78.414, "matched_fragments": 92, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 96.1642, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016724845.1", "gtdb_species": "s__Sphingobacterium spiritivorum_A", "ani": 78.3279, "matched_fragments": 96, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.88", "min_intra_species_ani": "95.78", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_009829075.1", "gtdb_species": "s__Sphingobacterium composti", "ani": 78.304, "matched_fragments": 88, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008180195.1", "gtdb_species": "s__Sphingobacterium phlebotomi", "ani": 78.2322, "matched_fragments": 162, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008274825.1", "gtdb_species": "s__Sphingobacterium hotanense", "ani": 78.2192, "matched_fragments": 107, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.82", "min_intra_species_ani": "97.82", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_011046555.1", "gtdb_species": "s__Sphingobacterium lactis", "ani": 78.1609, "matched_fragments": 104, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_011043555.1", "gtdb_species": "s__Sphingobacterium sp011043555", "ani": 78.1447, "matched_fragments": 163, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005048855.1", "gtdb_species": "s__Sphingobacterium olei", "ani": 78.1354, "matched_fragments": 111, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008124885.1", "gtdb_species": "s__Sphingobacterium composti_A", "ani": 78.0812, "matched_fragments": 227, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015209965.1", "gtdb_species": "s__Sphingobacterium sp015209965", "ani": 78.0619, "matched_fragments": 109, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014692505.1", "gtdb_species": "s__Sphingobacterium arenae", "ani": 78.0495, "matched_fragments": 146, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000143765.1", "gtdb_species": "s__Sphingobacterium spiritivorum", "ani": 77.9453, "matched_fragments": 97, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_002980575.1", "gtdb_species": "s__Sphingobacterium gobiense", "ani": 77.9285, "matched_fragments": 157, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000416985.1", "gtdb_species": "s__Sphingobacterium paucimobilis", "ani": 77.7874, "matched_fragments": 102, "total_fragments": 1463, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }