{ "tc_result": [ { "organism_name": "Protaetiibacter intestinalis", "strain": "strain=2DFWR-13", "accession": "GCA_003627075.1", "taxid": 2419774, "species_taxid": 2419774, "relation_to_type": "type", "validated": true, "ani": 80.8363, "matched_fragments": 497, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Protaetiibacter larvae", "strain": "strain=KACC 19322", "accession": "GCA_008365275.1", "taxid": 2592654, "species_taxid": 2592654, "relation_to_type": "type", "validated": true, "ani": 80.2802, "matched_fragments": 468, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseoglobus frigidaquae", "strain": "strain=DSM 23889", "accession": "GCA_009664385.2", "taxid": 424758, "species_taxid": 424758, "relation_to_type": "type", "validated": true, "ani": 79.3142, "matched_fragments": 393, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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"accession": "GCA_008122505.1", "taxid": 2604423, "species_taxid": 2604423, "relation_to_type": "type", "validated": true, "ani": 78.9944, "matched_fragments": 439, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces fucosus", "strain": "strain=CCUG 35506", "accession": "GCA_004134865.1", "taxid": 41985, "species_taxid": 41985, "relation_to_type": "type", "validated": true, "ani": 78.9878, "matched_fragments": 396, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces mediolanus", "strain": "strain=JCM 3346", "accession": "GCA_014648575.1", "taxid": 41986, "species_taxid": 41986, "relation_to_type": "type", "validated": true, "ani": 78.9789, "matched_fragments": 393, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces ramosus", "strain": "strain=DSM 43045", "accession": "GCA_004216665.1", "taxid": 33879, "species_taxid": 33879, "relation_to_type": "type", "validated": true, "ani": 78.9363, "matched_fragments": 412, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rathayibacter festucae", "strain": "strain=DSM 15932", "accession": "GCA_004011135.1", "taxid": 110937, "species_taxid": 110937, "relation_to_type": "type", "validated": true, "ani": 78.8793, "matched_fragments": 398, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbiconiux solani", "strain": "strain=NBRC 106740", "accession": "GCA_001571005.1", "taxid": 661329, "species_taxid": 661329, "relation_to_type": "type", "validated": true, "ani": 78.8623, "matched_fragments": 394, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Galbitalea soli", "strain": "strain=DSM 105515", "accession": "GCA_013410525.1", "taxid": 1268042, "species_taxid": 1268042, "relation_to_type": "type", "validated": true, "ani": 78.8342, "matched_fragments": 380, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces bracchium", "strain": "strain=JCM 11433", "accession": "GCA_009709675.1", "taxid": 88376, "species_taxid": 88376, "relation_to_type": "type", "validated": true, "ani": 78.7095, "matched_fragments": 434, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Curtobacterium herbarum", "strain": "strain=DSM 14013", "accession": "GCA_016907335.1", "taxid": 150122, "species_taxid": 150122, "relation_to_type": "suspected-type", "validated": true, "ani": 78.6864, "matched_fragments": 317, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gryllotalpicola protaetiae", "strain": "strain=2DFW10M-5", "accession": "GCA_003627055.1", "taxid": 2419771, "species_taxid": 2419771, "relation_to_type": "type", "validated": true, "ani": 78.6321, "matched_fragments": 340, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frigoribacterium faeni", "strain": "strain=NBRC 103066", "accession": "GCA_007988805.1", "taxid": 145483, "species_taxid": 145483, "relation_to_type": "type", "validated": true, "ani": 78.6215, "matched_fragments": 350, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rathayibacter caricis", "strain": "strain=DSM 15933", "accession": "GCA_003044275.1", "taxid": 110936, "species_taxid": 110936, "relation_to_type": "type", "validated": true, "ani": 78.5679, "matched_fragments": 366, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrococcus jenensis", "strain": "strain=DSM 9580", "accession": "GCA_003752465.1", "taxid": 46353, "species_taxid": 46353, "relation_to_type": "type", "validated": true, "ani": 78.484, "matched_fragments": 359, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Curtobacterium herbarum", "strain": "strain=LMG19917T", "accession": "GCA_025000405.1", "taxid": 150122, "species_taxid": 150122, "relation_to_type": "suspected-type", "validated": true, "ani": 78.4659, "matched_fragments": 317, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter michiganensis subsp. tessellarius", "strain": "strain=ATCC 33566", "accession": "GCA_021922985.1", "taxid": 31965, "species_taxid": 28447, "relation_to_type": "type", "validated": true, "ani": 78.4498, "matched_fragments": 351, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter michiganensis subsp. tessellarius", "strain": "strain=ATCC 33566", "accession": "GCA_002240635.1", "taxid": 31965, "species_taxid": 28447, "relation_to_type": "type", "validated": true, "ani": 78.4479, "matched_fragments": 364, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium humi", "strain": "strain=DSM 21799", "accession": "GCA_900105715.1", "taxid": 640635, "species_taxid": 640635, "relation_to_type": "type", "validated": true, "ani": 78.4329, "matched_fragments": 314, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium lemovicicum", "strain": "strain=Viu22", "accession": "GCA_003991875.1", "taxid": 1072463, "species_taxid": 1072463, "relation_to_type": "type", "validated": true, "ani": 78.4237, "matched_fragments": 371, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium aurum", "strain": "strain=DSM 8600", "accession": "GCA_016907815.1", "taxid": 36805, "species_taxid": 36805, "relation_to_type": "type", "validated": true, "ani": 78.4175, "matched_fragments": 337, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium trichothecenolyticum", "strain": "strain=DSM 8608", "accession": "GCA_000956465.1", "taxid": 69370, "species_taxid": 69370, "relation_to_type": "type", "validated": true, "ani": 78.4153, "matched_fragments": 361, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces archimandritae", "strain": "strain=G127AT", "accession": "GCA_018024495.1", "taxid": 2781962, "species_taxid": 2781962, "relation_to_type": "type", "validated": true, "ani": 78.3476, "matched_fragments": 382, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hatanonis", "strain": "strain=JCM14558", "accession": "GCA_008017415.1", "taxid": 404366, "species_taxid": 404366, "relation_to_type": "type", "validated": true, "ani": 78.2361, "matched_fragments": 339, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium flavum", "strain": "strain=DSM 18909", "accession": "GCA_018717645.1", "taxid": 415216, "species_taxid": 415216, "relation_to_type": "type", "validated": true, "ani": 78.0194, "matched_fragments": 307, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014653215.1", "gtdb_species": "s__Pseudolysinimonas yzui", "ani": 100.0, "matched_fragments": 1013, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Pseudolysinimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_003627075.1", "gtdb_species": "s__Protaetiibacter intestinalis", "ani": 80.8487, "matched_fragments": 496, "total_fragments": 1014, 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"d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Yonghaparkia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.25", "min_intra_species_ani": "99.25", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_008017545.1", "gtdb_species": "s__Protaetiibacter sp008017545", "ani": 79.7213, "matched_fragments": 423, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Protaetiibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014595885.1", "gtdb_species": "s__Yonghaparkia alkaliphila_A", "ani": 79.639, "matched_fragments": 432, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Yonghaparkia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_017355965.1", "gtdb_species": "s__JAFIQW01 sp017355965", "ani": 79.4053, "matched_fragments": 411, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__JAFIQW01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011761235.1", "gtdb_species": "s__Frigoribacterium faeni_A", "ani": 78.9898, "matched_fragments": 370, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Frigoribacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }