{ "type": "genome", "identifier": "GCF_014653505.1", "organism": "Pseudodonghicola xiamenensis", "title": "Pseudodonghicola xiamenensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014653505.1", "bioproject": "PRJNA224116", "biosample": "SAMD00245149", "wgs_master": "BNAP00000000.1", "refseq_category": "na", "taxid": "337702", "species_taxid": "337702", "organism_name": "Pseudodonghicola xiamenensis", "infraspecific_name": "strain=CGMCC 1.7081", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/09/12", "asm_name": "ASM1465350v1", "asm_submitter": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "gbrs_paired_asm": "GCA_014653505.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/653/505/GCF_014653505.1_ASM1465350v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4791472", "genome_size_ungapped": "4791472", "gc_percent": "63.500000", "replicon_count": "0", "scaffold_count": "93", "contig_count": "93", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014653505.1-RS_2024_12_23", "annotation_date": "2024-12-23", "total_gene_count": "4566", "protein_coding_gene_count": "4414", "non_coding_gene_count": "55", "pubmed_id": "30832757" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-09-12", "dateModified": "2020-09-12", "datePublished": "2020-09-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudodonghicola xiamenensis" ], "sample_taxid": [ "337702" ], "sample_host_organism": [], 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"status": "below_threshold" }, { "organism_name": "Leisingera aquaemixtae", "strain": "strain=CECT 8399", "accession": "GCA_001458395.1", "taxid": 1396826, "species_taxid": 1396826, "relation_to_type": "type", "validated": true, "ani": 78.8575, "matched_fragments": 577, "total_fragments": 1550, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum tesquicola", "strain": "strain=A-36s", "accession": "GCA_024128855.1", "taxid": 540254, "species_taxid": 540254, "relation_to_type": "type", "validated": true, "ani": 78.1955, "matched_fragments": 445, "total_fragments": 1550, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoprimorskyibacter insulae", "strain": "strain=CECT 8871", "accession": "GCA_900302505.1", "taxid": 1695997, "species_taxid": 1695997, "relation_to_type": "type", "validated": true, "ani": 77.8191, "matched_fragments": 358, "total_fragments": 1550, "ani_threshold": 95, "status": "below_threshold" }, { 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