{ "type": "genome", "identifier": "GCF_014656075.1", "organism": "Streptomyces hydrogenans", "title": "Streptomyces hydrogenans", "description": "na", "data type": "Genome sequencing and assembly", "organization": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014656075.1", "bioproject": "PRJNA224116", "biosample": "SAMD00245515", "wgs_master": "BNBS00000000.1", "refseq_category": "na", "taxid": "1873719", "species_taxid": "1873719", "organism_name": "Streptomyces hydrogenans", "infraspecific_name": "strain=JCM 4771", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/09/12", "asm_name": "ASM1465607v1", "asm_submitter": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "gbrs_paired_asm": "GCA_014656075.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/656/075/GCF_014656075.1_ASM1465607v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "9019212", "genome_size_ungapped": "9017644", "gc_percent": "73.000000", "replicon_count": "0", "scaffold_count": "332", "contig_count": "332", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014656075.1-RS_2024_09_02", "annotation_date": "2024-09-02", "total_gene_count": "8398", "protein_coding_gene_count": "8055", "non_coding_gene_count": "78", "pubmed_id": "30832757" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-09-12", "dateModified": "2020-09-12", "datePublished": "2020-09-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces hydrogenans" ], "sample_taxid": [ "1873719" ], "sample_host_organism": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces venezuelae", "strain": "strain=ATCC 10712", "accession": "GCA_021432215.1", "taxid": 54571, "species_taxid": 54571, "relation_to_type": "type", "validated": true, "ani": 86.8694, "matched_fragments": 1479, "total_fragments": 2858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces nymphaeiformis", "strain": "strain=SFB5A", "accession": "GCA_014203895.1", "taxid": 2663842, "species_taxid": 2663842, "relation_to_type": "type", "validated": true, "ani": 86.8169, "matched_fragments": 1886, "total_fragments": 2858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces zaomyceticus", "strain": "strain=JCM 4864", "accession": "GCA_014656215.1", "taxid": 68286, "species_taxid": 68286, "relation_to_type": "type", "validated": true, "ani": 86.4527, "matched_fragments": 1859, "total_fragments": 2858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces laurentii", "strain": "strain=ATCC 31255", "accession": "GCA_002355495.1", "taxid": 39478, "species_taxid": 39478, "relation_to_type": "type", "validated": true, "ani": 84.8357, "matched_fragments": 1642, "total_fragments": 2858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces somaliensis", "strain": "strain=DSM 40738", "accession": "GCA_024349285.1", "taxid": 78355, "species_taxid": 78355, "relation_to_type": "type", "validated": true, "ani": 82.678, "matched_fragments": 1102, "total_fragments": 2858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces lichenis", "strain": "strain=LCR6-01", "accession": "GCA_023218175.1", "taxid": 2306967, "species_taxid": 2306967, "relation_to_type": "type", "validated": true, "ani": 82.5384, "matched_fragments": 1397, "total_fragments": 2858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces sudanensis", "strain": "strain=SD 504", "accession": "GCA_023614315.1", "taxid": 436397, "species_taxid": 436397, "relation_to_type": "type", "validated": true, "ani": 82.412, "matched_fragments": 1181, "total_fragments": 2858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces melanogenes", "strain": "strain=JCM 4398", "accession": "GCA_014649795.1", "taxid": 67326, "species_taxid": 67326, "relation_to_type": "type", "validated": true, "ani": 82.3716, "matched_fragments": 1495, "total_fragments": 2858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinokineospora diospyrosa", "strain": "strain=DSM 44255", "accession": "GCA_024171925.1", "taxid": 103728, "species_taxid": 103728, "relation_to_type": "type", "validated": true, "ani": 76.1881, "matched_fragments": 625, "total_fragments": 2858, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 1.04, "strain_heterogeneity": 0.0 }, 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