{ "type": "genome", "identifier": "GCF_014673435.1", "organism": "Maribacter polysiphoniae", "title": "Maribacter polysiphoniae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Anhui University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014673435.1", "bioproject": "PRJNA224116", "biosample": "SAMN15462446", "wgs_master": "JACWLN000000000.1", "refseq_category": "na", "taxid": "429344", "species_taxid": "429344", "organism_name": "Maribacter polysiphoniae", "infraspecific_name": "strain=KCTC 22021", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/09/21", "asm_name": "ASM1467343v1", "asm_submitter": "Anhui University", "gbrs_paired_asm": "GCA_014673435.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/673/435/GCF_014673435.1_ASM1467343v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5135292", "genome_size_ungapped": "5135292", "gc_percent": "40.500000", "replicon_count": "0", "scaffold_count": "32", "contig_count": "32", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014673435.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "4406", "protein_coding_gene_count": "4339", "non_coding_gene_count": "45", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-09-21", "dateModified": "2020-09-21", "datePublished": "2020-09-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Maribacter polysiphoniae" ], "sample_taxid": [ "429344" ], "sample_host_organism": [ "missing" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Japan:Gulf of Peter the Great" ], "sample_host_location_id": [], "data_size": "1.453 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5135292", "Number of Sequences": "32", "Longest Sequences (bp)": "1004617", "N50 (bp)": "478388", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "40.3", "Number of CDSs": "4309", "Average Protein Length": "348.8", "Coding Ratio (%)": "87.8", "Number of rRNAs": "3", "Number of tRNAs": "38", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Maribacter polysiphoniae", "strain": "strain=KCTC 22021", "accession": "GCA_014673435.1", "taxid": 429344, "species_taxid": 429344, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1691, "total_fragments": 1695, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Maribacter polysiphoniae", "strain": "strain=DSM 23514", "accession": "GCA_003148665.1", "taxid": 429344, "species_taxid": 429344, "relation_to_type": "type", "validated": true, "ani": 99.9893, "matched_fragments": 1683, "total_fragments": 1695, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Maribacter luteus", "strain": "strain=RZ05", "accession": "GCA_009674825.1", "taxid": 2594478, "species_taxid": 2594478, "relation_to_type": "type", "validated": true, "ani": 82.4757, "matched_fragments": 949, "total_fragments": 1695, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter arenosus", "strain": "strain=CAU 1321", "accession": "GCA_014610845.1", "taxid": 1854708, "species_taxid": 1854708, "relation_to_type": "type", "validated": true, "ani": 79.1472, "matched_fragments": 587, "total_fragments": 1695, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter caenipelagi", "strain": "strain=CECT 8455", "accession": "GCA_004364175.1", "taxid": 1447781, "species_taxid": 1447781, "relation_to_type": "type", "validated": true, "ani": 77.9519, "matched_fragments": 151, "total_fragments": 1695, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Muricauda aurea", "strain": "strain=BC31-1-A7", "accession": "GCA_017313785.1", "taxid": 2915619, "species_taxid": 2915619, "relation_to_type": "type", "validated": true, "ani": 77.6639, "matched_fragments": 135, "total_fragments": 1695, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kriegella aquimaris", "strain": "strain=DSM 19886", "accession": "GCA_900103215.1", "taxid": 192904, "species_taxid": 192904, "relation_to_type": "type", "validated": true, "ani": 77.4429, "matched_fragments": 186, "total_fragments": 1695, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter ulvicola", "strain": "strain=DSM 15366", 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