{
    "type": "genome",
    "identifier": "GCF_014836415.1",
    "organism": "Sporosarcina gallistercoris",
    "title": "Sporosarcina gallistercoris",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Quadram Institutte",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_014836415.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN15803266",
        "wgs_master": "JACSQY000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2762245",
        "species_taxid": "2762245",
        "organism_name": "Sporosarcina gallistercoris",
        "infraspecific_name": "strain=Sa3CUA8",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/09/30",
        "asm_name": "ASM1483641v1",
        "asm_submitter": "Quadram Institutte",
        "gbrs_paired_asm": "GCA_014836415.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/836/415/GCF_014836415.1_ASM1483641v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3134129",
        "genome_size_ungapped": "3133529",
        "gc_percent": "44.000000",
        "replicon_count": "0",
        "scaffold_count": "25",
        "contig_count": "25",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_014836415.1-RS_2024_11_18",
        "annotation_date": "2024-11-18",
        "total_gene_count": "3084",
        "protein_coding_gene_count": "3009",
        "non_coding_gene_count": "50",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-09-30",
    "dateModified": "2020-09-30",
    "datePublished": "2020-09-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sporosarcina gallistercoris"
        ],
        "sample_taxid": [
            "2762245"
        ],
        "sample_host_organism": [
            "Gallus gallus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom: Norwich"
        ],
        "sample_host_location_id": [],
        "data_size": "0.897 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3134129",
        "Number of Sequences": "25",
        "Longest Sequences (bp)": "632869",
        "N50 (bp)": "210519",
        "Gap Ratio (%)": "0.019144",
        "GCcontent (%)": "44.0",
        "Number of CDSs": "3069",
        "Average Protein Length": "296.0",
        "Coding Ratio (%)": "86.9",
        "Number of rRNAs": "2",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Sporosarcina gallistercoris",
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                "species_taxid": 2762245,
                "relation_to_type": "type",
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                "total_fragments": 1034,
                "ani_threshold": 95,
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            },
            {
                "organism_name": "Sporosarcina ureae",
                "strain": "strain=DSM 2281",
                "accession": "GCA_000425545.1",
                "taxid": 1571,
                "species_taxid": 1571,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.524,
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                "total_fragments": 1034,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "strain": "strain=DSM 13886",
                "accession": "GCA_014873855.1",
                "taxid": 34101,
                "species_taxid": 34101,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3852,
                "matched_fragments": 91,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sporosarcina luteola",
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                "accession": "GCA_007991495.1",
                "taxid": 582850,
                "species_taxid": 582850,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2959,
                "matched_fragments": 106,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Filibacter tadaridae",
                "strain": "",
                "accession": "GCA_900609045.1",
                "taxid": 2483811,
                "species_taxid": 2483811,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2372,
                "matched_fragments": 98,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenisporosarcina indica",
                "strain": "strain=PN2",
                "accession": "GCA_001939075.1",
                "taxid": 650093,
                "species_taxid": 650093,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8619,
                "matched_fragments": 53,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sporosarcina jiandibaonis",
                "strain": "strain=LAM9210",
                "accession": "GCA_013184495.1",
                "taxid": 2715535,
                "species_taxid": 2715535,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7871,
                "matched_fragments": 58,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Planococcus glaciei",
                "strain": "strain=CGMCC 1.6846",
                "accession": "GCA_900099655.1",
                "taxid": 459472,
                "species_taxid": 459472,
                "relation_to_type": "type",
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                "ani": 76.7855,
                "matched_fragments": 51,
                "total_fragments": 1034,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "accession": "GCF_014836415.1",
                "gtdb_species": "s__Sporosarcina sp014836415",
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                "total_fragments": 1034,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Sporosarcina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_000813425.1",
                "gtdb_species": "s__Sporosarcina sp000813425",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.98",
                "min_intra_species_ani": "95.98",
                "mean_intra_species_af": "0.89",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_003384035.1",
                "gtdb_species": "s__Sporosarcina sp003384035",
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                "matched_fragments": 808,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Sporosarcina",
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                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCF_000586555.1",
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                "mean_intra_species_ani": "N/A",
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            },
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                "accession": "GCF_000829195.1",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "gallistercoris"
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}