{
    "type": "genome",
    "identifier": "GCF_014931715.1",
    "organism": "Sulfurovum indicum",
    "title": "Sulfurovum indicum",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Third Institute of Oceanography, Ministry of Natural Resources",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_014931715.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN16427069",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "2779528",
        "species_taxid": "2779528",
        "organism_name": "Sulfurovum indicum",
        "infraspecific_name": "strain=ST-419",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/10/26",
        "asm_name": "ASM1493171v1",
        "asm_submitter": "Third Institute of Oceanography, Ministry of Natural Resources",
        "gbrs_paired_asm": "GCA_014931715.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/931/715/GCF_014931715.1_ASM1493171v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2209694",
        "genome_size_ungapped": "2209694",
        "gc_percent": "42.500000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_014931715.1-RS_2024_12_13",
        "annotation_date": "2024-12-13",
        "total_gene_count": "2202",
        "protein_coding_gene_count": "2137",
        "non_coding_gene_count": "57",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-10-26",
    "dateModified": "2020-10-26",
    "datePublished": "2020-10-26",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sulfurovum indicum"
        ],
        "sample_taxid": [
            "2779528"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Indian Ocean"
        ],
        "sample_host_location_id": [],
        "data_size": "0.624 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2209694",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "2209694",
        "N50 (bp)": "2209694",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "42.5",
        "Number of CDSs": "2156",
        "Average Protein Length": "308.3",
        "Coding Ratio (%)": "90.3",
        "Number of rRNAs": "6",
        "Number of tRNAs": "45",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Sulfurovum indicum",
                "strain": "strain=ST-419",
                "accession": "GCA_014931715.1",
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                "species_taxid": 2779528,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 735,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Sulfurovum lithotrophicum",
                "strain": "strain=ATCC BAA-797",
                "accession": "GCA_000987835.1",
                "taxid": 206403,
                "species_taxid": 206403,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5033,
                "matched_fragments": 236,
                "total_fragments": 736,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurovum riftiae",
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                "accession": "GCA_001595645.1",
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                "species_taxid": 1630136,
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                "total_fragments": 736,
                "ani_threshold": 95,
                "status": "below_threshold"
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        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "accession": "GCF_014931715.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000987835.1",
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                "matched_fragments": 238,
                "total_fragments": 736,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003934925.1",
                "gtdb_species": "s__Sulfurovum sp003934925",
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                "matched_fragments": 203,
                "total_fragments": 736,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000010345.1",
                "gtdb_species": "s__Sulfurovum sp000010345",
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                "matched_fragments": 249,
                "total_fragments": 736,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001595645.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.37",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_014763895.1",
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    },
    "_bac2feature": {
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        "bacillus_cell_shape": 0.0,
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    "_genome_taxon": [
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        "indicum"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}