{
    "type": "genome",
    "identifier": "GCF_015191005.1",
    "organism": "Kaistella flava (ex Peng et al. 2021)",
    "title": "Kaistella flava (ex Peng et al. 2021)",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Wuhan University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_015191005.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN11656311",
        "wgs_master": "na",
        "refseq_category": "na",
        "taxid": "2038776",
        "species_taxid": "2038776",
        "organism_name": "Kaistella flava (ex Peng et al. 2021)",
        "infraspecific_name": "strain=7-3A",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/11/02",
        "asm_name": "ASM1519100v1",
        "asm_submitter": "Wuhan University",
        "gbrs_paired_asm": "GCA_015191005.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/015/191/005/GCF_015191005.1_ASM1519100v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3716699",
        "genome_size_ungapped": "3716699",
        "gc_percent": "34.500000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_015191005.1-RS_2025_01_08",
        "annotation_date": "2025-01-08",
        "total_gene_count": "3379",
        "protein_coding_gene_count": "3274",
        "non_coding_gene_count": "76",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-11-02",
    "dateModified": "2020-11-02",
    "datePublished": "2020-11-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Kaistella flava (ex Peng et al. 2021)"
        ],
        "sample_taxid": [
            "2038776"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Antarctica:King George Island"
        ],
        "sample_host_location_id": [],
        "data_size": "1.024 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3716699",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "3716699",
        "N50 (bp)": "3716699",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "34.5",
        "Number of CDSs": "3292",
        "Average Protein Length": "319.3",
        "Coding Ratio (%)": "84.8",
        "Number of rRNAs": "19",
        "Number of tRNAs": "54",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Kaistella antarctica",
                "strain": "strain=NCTC13489",
                "accession": "GCA_900637895.1",
                "taxid": 266748,
                "species_taxid": 266748,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.5753,
                "matched_fragments": 704,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kaistella antarctica",
                "strain": "strain=DSM 17047",
                "accession": "GCA_900109615.1",
                "taxid": 266748,
                "species_taxid": 266748,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.5243,
                "matched_fragments": 702,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kaistella carnis",
                "strain": "strain=G0081",
                "accession": "GCA_003860585.1",
                "taxid": 1241979,
                "species_taxid": 1241979,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.3605,
                "matched_fragments": 660,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kaistella jeonii",
                "strain": "strain=NCTC13459",
                "accession": "GCA_900638245.1",
                "taxid": 266749,
                "species_taxid": 266749,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.6629,
                "matched_fragments": 591,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kaistella jeonii",
                "strain": "strain=DSM 17048",
                "accession": "GCA_000812865.1",
                "taxid": 266749,
                "species_taxid": 266749,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.6373,
                "matched_fragments": 585,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kaistella jeonii",
                "strain": "strain=DSM 17048",
                "accession": "GCA_900112115.1",
                "taxid": 266749,
                "species_taxid": 266749,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.6166,
                "matched_fragments": 576,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kaistella gelatinilytica",
                "strain": "strain=G5-32",
                "accession": "GCA_015679325.1",
                "taxid": 2787636,
                "species_taxid": 2787636,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.5983,
                "matched_fragments": 587,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kaistella chaponensis",
                "strain": "strain=DSM 23145",
                "accession": "GCA_900156725.1",
                "taxid": 713588,
                "species_taxid": 713588,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.3176,
                "matched_fragments": 515,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kaistella solincola",
                "strain": "strain=DSM 22468",
                "accession": "GCA_000812875.1",
                "taxid": 510955,
                "species_taxid": 510955,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.7423,
                "matched_fragments": 386,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chryseobacterium ginsenosidimutans",
                "strain": "strain=THG 15",
                "accession": "GCA_024807225.1",
                "taxid": 687846,
                "species_taxid": 687846,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7538,
                "matched_fragments": 260,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chryseobacterium scophthalmum",
                "strain": "strain=DSM 16779",
                "accession": "GCA_900143185.1",
                "taxid": 59733,
                "species_taxid": 59733,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5361,
                "matched_fragments": 270,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chryseobacterium gwangjuense",
                "strain": "strain=THG-A18",
                "accession": "GCA_021311115.1",
                "taxid": 1069980,
                "species_taxid": 1069980,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3548,
                "matched_fragments": 227,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavobacterium endoglycinae",
                "strain": "strain=BB8",
                "accession": "GCA_017352115.1",
                "taxid": 2816357,
                "species_taxid": 2816357,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9169,
                "matched_fragments": 66,
                "total_fragments": 1238,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 4.17,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_015191005.1",
                "gtdb_species": "s__Kaistella flava",
                "ani": 100.0,
                "matched_fragments": 1238,
                "total_fragments": 1238,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Kaistella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_004359195.1",
                "gtdb_species": "s__Kaistella sp004359195",
                "ani": 83.6281,
                "matched_fragments": 749,
                "total_fragments": 1238,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Kaistella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002415135.1",
                "gtdb_species": "s__Kaistella sp002415135",
                "ani": 83.5988,
                "matched_fragments": 757,
                "total_fragments": 1238,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Kaistella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900109615.1",
                "gtdb_species": "s__Kaistella antarctica",
                "ani": 82.5169,
                "matched_fragments": 703,
                "total_fragments": 1238,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Kaistella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_003860585.1",
                "gtdb_species": "s__Kaistella carnis",
                "ani": 82.4019,
                "matched_fragments": 660,
                "total_fragments": 1238,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Kaistella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.86",
                "min_intra_species_ani": "96.44",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_007362475.1",
                "gtdb_species": "s__Kaistella sp007362475",
                "ani": 80.9834,
                "matched_fragments": 552,
                "total_fragments": 1238,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Kaistella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000812865.1",
                "gtdb_species": "s__Kaistella jeonii",
                "ani": 80.647,
                "matched_fragments": 585,
                "total_fragments": 1238,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Kaistella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Kaistella",
        "flava",
        "(ex",
        "Peng",
        "et",
        "al.",
        "2021)"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}