# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_35	LOCUS_00340	sequence01:31562..31738(-)	partial			WP_002356740.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_229	LOCUS_02280	sequence01:235283..236002(-)	partial			WP_002262616.1	helix-turn-helix transcriptional regulator	40.2	73.3	46.5
MGA_241	LOCUS_02400	sequence01:247923..250094(-)	partial			WP_010989462.1	class 1 internalin InlA	40.7	37.5	35.7
MGA_342	LOCUS_03410	sequence01:348795..349859(+)	partial			WP_025873024.1	DUF4950 domain-containing protein	83.3	73.2	38.6
MGA_345	LOCUS_03440	sequence01:352008..352259(-)	partial			WP_002389274.1	hypothetical protein	74.7	74.7	87.1
MGA_358	LOCUS_03570	sequence01:366208..366357(-)	partial			WP_033582077.1	ribosome silencing factor	100.0	45.8	81.6
MGA_445	LOCUS_04430	sequence02:65940..66314(-)	internal_stop_codon	66453..66455(-)		WP_002358005.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	100.0	51.7	100.0
MGA_446	LOCUS_04440	sequence02:66453..66608(-)	internal_stop_codon	66453..66455(-)		WP_002358005.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	100.0	21.2	98.0
MGA_483	LOCUS_04810	sequence02:102217..102978(+)	frameshift		102951	WP_002363734.1	DUF916 and DUF3324 domain-containing protein	99.6	71.2	93.7
MGA_484	LOCUS_04820	sequence02:102983..103282(+)	frameshift		102954	WP_002363734.1	DUF916 and DUF3324 domain-containing protein	100.0	28.0	99.0
MGA_516	LOCUS_05140	sequence02:132278..132904(+)	frameshift		132793	WP_002379346.1	response regulator	83.7	75.7	94.8
MGA_585	LOCUS_05830	sequence02:206243..206512(+)	internal_stop_codon	206510..206512(+)		WP_002365550.1	phage major tail protein, TP901-1 family	100.0	52.4	100.0
MGA_629	LOCUS_06270	sequence02:256620..257474(+)	frameshift		256551	WP_002379387.1	ThiF family adenylyltransferase	100.0	75.3	94.7
MGA_690	LOCUS_06880	sequence02:324229..324552(+)	internal_stop_codon	324550..324552(+)		WP_002357722.1	NAD(P)H-dependent oxidoreductase subunit E	100.0	66.0	100.0
MGA_691	LOCUS_06890	sequence02:324574..324717(+)	internal_stop_codon	324550..324552(+)		WP_002357722.1	NAD(P)H-dependent oxidoreductase subunit E	100.0	29.0	100.0
MGA_693	LOCUS_06910	sequence02:326030..327541(+)	frameshift		327493	WP_002371207.1	formate dehydrogenase subunit alpha	97.2	54.0	98.6
MGA_694	LOCUS_06920	sequence02:327556..328758(+)	frameshift		327505	WP_002371207.1	formate dehydrogenase subunit alpha	100.0	44.2	99.5
MGA_778	LOCUS_07760	sequence03:87917..88192(+)	frameshift		88168	WP_002360346.1	LysM domain-containing protein	82.4	36.1	88.0
MGA_779	LOCUS_07770	sequence03:88240..88563(+)	frameshift		88168	WP_002360346.1	LysM domain-containing protein	97.2	50.0	68.3
MGA_827	LOCUS_08250	sequence03:136358..136561(+)	frameshift,internal_stop_codon	136559..136561(+)	136579	WP_002379460.1	catalase	100.0	14.0	98.5
MGA_828	LOCUS_08260	sequence03:136669..137793(+)	frameshift,internal_stop_codon	136559..136561(+)	136579	WP_002379460.1	catalase	100.0	78.2	99.5
MGA_832	LOCUS_08300	sequence03:142482..142655(-)	frameshift		142493	WP_002360285.1	sucrose-specific PTS transporter subunit IIBC	98.2	8.7	98.2
MGA_900	LOCUS_08980	sequence03:213140..213685(-)	frameshift		213157	WP_002369341.1	hypothetical protein	97.2	75.9	96.0
MGA_973	LOCUS_09680	sequence04:76745..77509(-)	partial			WP_002360346.1	LysM domain-containing protein	27.6	33.7	68.6
MGA_978	LOCUS_09730	sequence04:79666..80187(+)	frameshift		79528	WP_002387270.1	phage regulatory protein	99.4	71.7	94.8
MGA_996	LOCUS_09910	sequence04:89944..90747(+)	partial			WP_099686546.1	terminase small subunit	22.5	19.3	45.0
MGA_999	LOCUS_09940	sequence04:93482..95239(+)	partial			WP_010706494.1	head protein	66.2	59.1	85.0
MGA_1055	LOCUS_10500	sequence04:146575..146700(+)	internal_stop_codon	146698..146700(+)		WP_002287114.1	PTS sugar transporter subunit IIB	100.0	26.3	85.4
MGA_1056	LOCUS_10510	sequence04:146845..147045(+)	internal_stop_codon	146698..146700(+)		WP_002287114.1	PTS sugar transporter subunit IIB	100.0	42.3	59.1
MGA_1089	LOCUS_10840	sequence04:181284..181436(-)	partial			WP_002357156.1	SPJ_0845 family protein	64.0	64.0	100.0
MGA_1111	LOCUS_11060	sequence04:202407..203549(+)	frameshift		203423	WP_011109539.1	group II intron reverse transcriptase/maturase	95.0	59.6	47.3
MGA_1112	LOCUS_11070	sequence04:204310..204666(+)	partial			WP_002399949.1	FtsK/SpoIIIE domain-containing protein	97.5	25.7	92.2
MGA_1113	LOCUS_11080	sequence04:204753..205193(+)	frameshift,internal_stop_codon	205191..205193(+)	205274	WP_002263187.1	zeta toxin family protein	99.3	65.0	45.5
MGA_1177	LOCUS_11700	sequence05:49674..51647(-)	partial			WP_002379133.1	isopeptide-forming domain-containing fimbrial protein	86.6	59.1	97.4
MGA_1293	LOCUS_12860	sequence05:179839..180687(+)	partial			WP_012803910.1	M48 family metallopeptidase	76.2	47.8	33.2
MGA_1385	LOCUS_13770	sequence06:66673..67104(-)	partial			WP_002358872.1	MerR family transcriptional regulator	100.0	55.4	73.4
MGA_1470	LOCUS_14620	sequence06:154506..155204(-)	frameshift		155245	WP_002399733.1	helix-turn-helix domain-containing protein	100.0	48.9	97.8
MGA_1471	LOCUS_14630	sequence06:155216..155929(-)	frameshift		155245	WP_002399733.1	helix-turn-helix domain-containing protein	98.3	49.2	95.7
MGA_1507	LOCUS_14980	sequence07:5681..7600(-)	frameshift		7737,7740	WP_067392747.1	SpaA isopeptide-forming pilin-related protein	99.5	30.3	48.3
MGA_1508	LOCUS_14990	sequence07:7717..11778(-)	frameshift		7737,7740	WP_067392747.1	SpaA isopeptide-forming pilin-related protein	99.7	67.5	51.2
MGA_1521	LOCUS_15120	sequence07:21475..22146(-)	frameshift		22219	WP_002386403.1	helix-turn-helix transcriptional regulator	100.0	73.1	99.6
MGA_1522	LOCUS_15130	sequence07:22199..22393(-)	frameshift		22219	WP_002386403.1	helix-turn-helix transcriptional regulator	95.3	20.0	100.0
MGA_1528	LOCUS_15190	sequence07:28818..29792(-)	partial			WP_023905931.1	Abi family protein	71.9	73.4	30.7
MGA_1567	LOCUS_15580	sequence07:73308..74009(-)	internal_stop_codon	74016..74018(-)		WP_002387436.1	maltose/glucose-specific PTS transporter subunit IIBC	100.0	44.6	99.6
MGA_1568	LOCUS_15590	sequence07:74016..74876(-)	internal_stop_codon	74016..74018(-)		WP_002387436.1	maltose/glucose-specific PTS transporter subunit IIBC	100.0	54.8	95.8
MGA_1647	LOCUS_16370	sequence08:18244..19137(+)	frameshift		19044	WP_002382783.1	hypothetical protein	97.6	61.6	85.9
MGA_1648	LOCUS_16380	sequence08:19187..19621(+)	frameshift		19053	WP_002382783.1	hypothetical protein	100.0	33.0	95.8
MGA_1696	LOCUS_16860	sequence08:74693..75265(-)	partial			WP_010905682.1	helix-turn-helix domain-containing protein	64.7	67.8	52.8
MGA_1703	LOCUS_16930	sequence08:77473..78150(+)	partial			WP_010939312.1	ERF family protein	57.3	53.2	32.3
MGA_1706	LOCUS_16960	sequence08:79755..80711(+)	partial			WP_012047836.1	phage replisome organizer N-terminal domain-containing protein	47.5	55.6	39.1
MGA_1707	LOCUS_16970	sequence08:80715..81239(+)	partial			WP_002399587.1	hypothetical protein	44.3	70.0	49.4
MGA_1720	LOCUS_17100	sequence08:86224..86745(+)	partial			WP_010774201.1	site-specific DNA-methyltransferase	99.4	44.3	59.5
MGA_1744	LOCUS_17340	sequence08:103970..105985(+)	partial			WP_002379375.1	phage tail protein	60.2	83.3	68.6
MGA_1751	LOCUS_17410	sequence08:110180..111445(+)	partial			WP_000955548.1	glucosaminidase domain-containing protein	49.4	13.5	41.8
MGA_1753	LOCUS_17430	sequence08:113377..113958(-)	partial			WP_025873024.1	DUF4950 domain-containing protein	89.6	41.2	35.9
MGA_1811	LOCUS_18000	sequence09:25110..25808(+)	frameshift		25793	WP_010774215.1	helicase-related protein	99.6	52.7	98.7
MGA_1812	LOCUS_18010	sequence09:25813..26427(+)	frameshift		25799	WP_010774215.1	helicase-related protein	100.0	46.6	96.1
MGA_1813	LOCUS_18020	sequence09:26672..27103(+)	partial			WP_002369291.1	phosphoribosyltransferase family protein	100.0	62.7	96.5
MGA_1933	LOCUS_19210	sequence10:30026..30625(-)	partial			WP_010905524.1	MarR family transcriptional regulator	98.0	64.9	29.1
MGA_1946	LOCUS_19340	sequence10:43742..43885(-)	partial			WP_002372618.1	putative holin-like toxin	100.0	72.3	89.4
MGA_2008	LOCUS_19950	sequence11:509..691(-)	partial			WP_002361123.1	hypothetical protein	100.0	71.4	91.7
MGA_2070	LOCUS_20570	sequence11:52827..53336(-)	partial			WP_002399578.1	DUF3850 domain-containing protein	68.0	62.5	76.5
MGA_2155	LOCUS_21420	sequence12:40836..41456(-)	frameshift		41472	WP_002387659.1	DUF4822 domain-containing protein	100.0	64.2	99.5
MGA_2156	LOCUS_21430	sequence12:41446..41802(-)	frameshift		41472	WP_002387659.1	DUF4822 domain-containing protein	97.5	35.8	93.9
MGA_2205	LOCUS_21920	sequence12:89987..91150(-)	partial			WP_002358327.1	beta-glucoside-specific PTS transporter subunit IIABC	99.5	60.9	94.0
MGA_2208	LOCUS_21950	sequence13:2771..3151(-)	frameshift,internal_stop_codon	3266..3268(-)	2788	WP_002390049.1	IS6-like element ISS1N family transposase	96.0	53.5	97.5
MGA_2209	LOCUS_21960	sequence13:3493..3828(-)	internal_stop_codon	3904..3906(-)		WP_003697882.1	Fic family protein	91.9	42.9	41.2
MGA_2210	LOCUS_21970	sequence13:3904..4203(-)	internal_stop_codon	3904..3906(-)		WP_003697882.1	Fic family protein	90.9	40.3	39.8
MGA_2214	LOCUS_22010	sequence13:7682..7987(-)	partial			WP_002287941.1	IS256-like element ISEfm2 family transposase	100.0	25.8	100.0
MGA_2215	LOCUS_22020	sequence13:8315..8569(-)	partial			WP_002296840.1	IS256-like element IS16 family transposase	97.6	20.8	86.6
MGA_2251	LOCUS_22380	sequence13:44180..44470(+)	partial			WP_011405444.1	hotdog fold thioesterase	91.7	64.7	53.4
MGA_2254	LOCUS_22410	sequence13:47546..47746(+)	partial			WP_002355314.1	hypothetical protein	71.2	71.2	100.0
MGA_2301	LOCUS_22860	sequence14:27901..29025(-)	partial			WP_010922656.1	restriction endonuclease subunit S	49.5	46.4	57.3
MGA_2304	LOCUS_22890	sequence14:31338..31802(+)	internal_stop_codon	31800..31802(+)		WP_002359847.1	PTS transporter subunit EIIC	91.6	34.4	26.4
MGA_2305	LOCUS_22900	sequence14:31812..32639(+)	internal_stop_codon	31800..31802(+),32637..32639(+)		WP_013095475.1	PTS cellobiose transporter subunit IIC	100.0	61.6	33.9
MGA_2397	LOCUS_23810	sequence15:51566..51928(-)	frameshift		52014	WP_002364530.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	100.0	43.8	99.2
MGA_2398	LOCUS_23820	sequence15:51994..52389(-)	frameshift		52011	WP_002364530.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	96.2	46.0	100.0
MGA_2478	LOCUS_24600	sequence17:21860..22084(-)	frameshift		22137	WP_002354996.1	hypothetical protein	100.0	28.4	98.6
MGA_2479	LOCUS_24610	sequence17:22117..22644(-)	frameshift		22137	WP_002354996.1	hypothetical protein	96.6	64.8	100.0
MGA_2498	LOCUS_24800	sequence17:41002..>43123(-)	partial			WP_010714147.1	WxL domain-containing protein	100.0	49.3	69.6
MGA_2501	LOCUS_24820	sequence18:1298..1954(+)	frameshift		1951	WP_002287875.1	pantoate--beta-alanine ligase	100.0	77.3	100.0
MGA_2502	LOCUS_24830	sequence18:1941..2144(+)	frameshift		1951	WP_002287875.1	pantoate--beta-alanine ligase	98.5	23.4	100.0
MGA_2504	LOCUS_24850	sequence18:3100..3936(-)	frameshift,internal_stop_codon	2822..2824(-)	3983	WP_086956687.1	IS3 family transposase	100.0	71.8	98.2
MGA_2505	LOCUS_24860	sequence18:3972..4262(-)	frameshift		3983	WP_086956687.1	IS3 family transposase	95.8	23.8	98.9
MGA_2521	LOCUS_25020	sequence18:17323..18126(+)	partial			WP_000282043.1	GHKL domain-containing protein	88.4	54.3	33.6
MGA_2607	LOCUS_25860	sequence21:4994..5302(+)	partial			WP_001284311.1	zeta toxin family protein	98.0	34.8	78.0
MGA_2608	LOCUS_25870	sequence21:5856..6356(-)	partial			WP_012775544.1	HAD family hydrolase	91.0	65.4	60.1
MGA_2619	LOCUS_25980	sequence21:15754..16362(+)	internal_stop_codon	15739..15741(+)		WP_001284311.1	zeta toxin family protein	81.7	57.5	93.3
MGA_2621	LOCUS_26000	sequence21:16576..16896(-)	frameshift		16590	WP_003100847.1	recombinase family protein	96.2	55.1	42.2
MGA_2622	LOCUS_26010	sequence21:17079..17552(+)	internal_stop_codon	17550..17552(+)		WP_011222049.1	Tn3 family transposase	98.1	15.4	61.0
MGA_2623	LOCUS_26020	sequence21:17592..18791(+)	frameshift,internal_stop_codon	17550..17552(+)	18674	WP_011222049.1	Tn3 family transposase	89.7	35.9	53.6
MGA_2624	LOCUS_26030	sequence21:18689..20050(+)	frameshift		18674	WP_011222049.1	Tn3 family transposase	99.6	45.2	74.7
MGA_2632	LOCUS_26110	sequence21:25597..25758(+)	frameshift		25743	WP_010708491.1	hypothetical protein	100.0	55.8	92.5
MGA_2633	LOCUS_26120	sequence21:25755..25883(+)	frameshift		25743	WP_010708491.1	hypothetical protein	100.0	44.2	95.2
MGA_2638	LOCUS_26170	sequence22:108..584(-)	internal_stop_codon	615..617(-)		WP_002387049.1	excinuclease ABC subunit UvrA	100.0	21.2	98.1
MGA_2639	LOCUS_26180	sequence22:615..2345(-)	internal_stop_codon	615..617(-)		WP_002387049.1	excinuclease ABC subunit UvrA	100.0	77.3	99.7
MGA_2640	LOCUS_26190	sequence22:2507..4756(+)	partial			WP_166034979.1	amidase family protein	69.6	83.5	54.6
MGA_2642	LOCUS_26210	sequence22:5882..6472(+)	frameshift		5927	WP_002376227.1	DUF4767 domain-containing protein	92.9	83.9	90.7
MGA_2662	LOCUS_26400	sequence23:3045..3191(+)	partial			WP_002358151.1	hypothetical protein	100.0	71.6	100.0
MGA_2685	LOCUS_26630	sequence24:7687..8421(-)	partial			WP_011674462.1	IS3-like element ISLca1 family transposase	99.6	49.3	35.3
MGA_2686	LOCUS_26640	sequence24:8579..8713(+)	internal_stop_codon	8540..8542(+)		WP_002375743.1	6-phospho-beta-glucosidase	97.7	9.0	81.4
MGA_2690	LOCUS_26680	sequence24:11727..12827(+)	frameshift		11694	WP_003245781.1	PTS mannose transporter subunit IIABC	97.0	56.2	42.6
MGA_2705	LOCUS_26830	sequence25:10259..10465(-)	internal_stop_codon	10478..10480(-)		WP_002358527.1	recombinase family protein	97.1	35.9	86.4
MGA_2706	LOCUS_26840	sequence25:10478..10663(-)	frameshift,internal_stop_codon	10477..10479(-)	10668	WP_002287936.1	recombinase family protein	98.4	29.4	73.3
MGA_2711	LOCUS_26890	sequence25:14341..>14996(-)	partial			WP_011254524.1	Rib/alpha-like domain-containing protein	100.0	13.3	31.4
MGA_2713	LOCUS_26900	sequence26:657..803(+)	internal_stop_codon	801..803(+)		WP_002287871.1	IS256 family transposase	100.0	12.3	100.0
MGA_2714	LOCUS_26910	sequence26:873..1826(+)	internal_stop_codon	801..803(+)		WP_002287871.1	IS256 family transposase	100.0	81.5	98.4
MGA_2717	LOCUS_26940	sequence26:4541..4795(+)	frameshift		4777	WP_002296623.1	ISL3 family transposase	98.8	19.3	94.0
MGA_2718	LOCUS_26950	sequence26:4831..5451(+)	frameshift		4720	WP_014748774.1	ISL3 family transposase	100.0	47.7	96.1
MGA_2722	LOCUS_26990	sequence26:8928..9095(-)	partial			WP_011861372.1	4Fe-4S binding protein	50.9	9.5	96.4
MGA_2725	LOCUS_27020	sequence26:10090..10260(-)	frameshift		10122	WP_002298088.1	hypothetical protein	91.1	28.3	84.3
MGA_2726	LOCUS_27030	sequence26:10384..10671(+)	internal_stop_codon	10669..10671(+)		WP_003426139.1	plasmid mobilization relaxosome protein MobC	50.5	41.4	93.8
MGA_2729	LOCUS_27060	sequence27:1638..1991(-)	internal_stop_codon	1992..1994(-)		WP_001059647.1	ISL3 family transposase	81.2	21.9	37.5
MGA_2730	LOCUS_27070	sequence27:1992..2483(-)	internal_stop_codon	1992..1994(-)		WP_001059647.1	ISL3 family transposase	100.0	37.2	46.6
MGA_2736	LOCUS_27130	sequence27:6614..7171(+)	frameshift		7072	WP_153495214.1	IS3 family transposase	83.8	33.9	96.8
MGA_2737	LOCUS_27140	sequence27:7168..7986(+)	frameshift		7072	WP_153495214.1	IS3 family transposase	100.0	59.5	96.0
MGA_2740	LOCUS_27160	sequence28:1..2110(+)	partial			WP_010714147.1	WxL domain-containing protein	100.0	49.3	51.2
MGA_2746	LOCUS_27220	sequence29:115..579(+)	partial			WP_011862017.1	BglG family transcription antiterminator	96.1	21.3	39.9
MGA_2748	LOCUS_27240	sequence29:888..1136(+)	frameshift		1109	WP_003435758.1	PTS ascorbate transporter subunit IIC	91.5	17.7	72.0
MGA_2749	LOCUS_27250	sequence29:1178..1513(+)	frameshift		1109	WP_003435758.1	PTS ascorbate transporter subunit IIC	98.2	25.8	70.6
MGA_2750	LOCUS_27260	sequence29:1453..2295(-)	frameshift		1497,2317	WP_002289277.1	MATE family efflux transporter	95.0	58.3	72.6
MGA_2756	LOCUS_27320	sequence29:6878..7546(+)	internal_stop_codon	7544..7546(+)		WP_002387374.1	peptide ABC transporter substrate-binding protein	98.6	41.1	52.0
MGA_2757	LOCUS_27330	sequence29:7547..7786(+)	internal_stop_codon	7544..7546(+)		WP_002387374.1	peptide ABC transporter substrate-binding protein	88.6	12.8	60.0
MGA_2762	LOCUS_27370	sequence30:4653..5534(-)	partial			WP_011101398.1	S41 family peptidase	85.7	73.4	30.0
MGA_2764	LOCUS_27390	sequence31:150..635(+)	internal_stop_codon	888..890(+),633..635(+)		WP_104859673.1	IS256 family transposase	100.0	41.4	61.5
MGA_2772	LOCUS_27440	sequence34:1..770(+)	partial			WP_010706791.1	DgaE family pyridoxal phosphate-dependent ammonia lyase	100.0	69.5	97.3
MGA_2774	LOCUS_27450	sequence35:30..833(-)	frameshift		880	WP_141741171.1	IS3 family transposase	100.0	56.4	66.3
MGA_2775	LOCUS_27460	sequence35:875..1432(-)	frameshift		883	WP_141741171.1	IS3 family transposase	99.5	40.2	57.9
MGA_2776	LOCUS_27470	sequence37:51..308(+)	frameshift,internal_stop_codon	306..308(+)	455	WP_061086363.1	IS6-like element IS1216 family transposase	100.0	37.6	96.5
MGA_2777	LOCUS_27480	sequence37:315..479(+)	frameshift,internal_stop_codon	306..308(+)	458	WP_002342378.1	IS6 family transposase	88.9	31.4	97.9
MGA_2826	LOCUS_27890	sequence46:40608..40811(+)	frameshift,internal_stop_codon	40809..40811(+)	40829	WP_002379460.1	catalase	100.0	14.0	98.5
MGA_2827	LOCUS_27900	sequence46:40919..42043(+)	frameshift,internal_stop_codon	40809..40811(+)	40829	WP_002379460.1	catalase	100.0	78.2	99.5
MGA_2831	LOCUS_27940	sequence46:46732..46905(-)	frameshift		46743	WP_002360285.1	sucrose-specific PTS transporter subunit IIBC	98.2	8.7	98.2