{ "type": "genome", "identifier": "GCF_015311765.1", "organism": "Enterococcus faecalis", "title": "Enterococcus faecalis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "National Center for Biotechnology Information", "publication": [ {} ], "properties": { "assembly_accession": "GCF_015311765.1", "bioproject": "PRJNA224116", "biosample": "SAMEA2149965", "wgs_master": "DACBOF000000000.1", "refseq_category": "na", "taxid": "1351", "species_taxid": "1351", "organism_name": "Enterococcus faecalis", "infraspecific_name": "strain=NCTC 775", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/11/09", "asm_name": "PDT000701674.1", "asm_submitter": "National Center for Biotechnology Information", "gbrs_paired_asm": "GCA_015311765.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/015/311/765/GCF_015311765.1_PDT000701674.1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2942300", "genome_size_ungapped": "2942300", "gc_percent": "37.500000", "replicon_count": "0", "scaffold_count": "47", "contig_count": "47", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-02-11", "total_gene_count": "2913", "protein_coding_gene_count": "2777", "non_coding_gene_count": "59", "pubmed_id": "30286803" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-11-09", "dateModified": "2020-11-09", "datePublished": "2020-11-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Enterococcus faecalis" ], "sample_taxid": [ "1351" ], "sample_host_organism": [ "unknown" ], "sample_host_organism_id": [], "sample_host_disease": [ "not known" ], "sample_host_disease_id": [], "sample_host_location": [ "United Kingdom" ], "sample_host_location_id": [], "data_size": "0.832 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 8.33, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2942300", "Number of Sequences": "47", "Longest Sequences (bp)": "383942", "N50 (bp)": "194418", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "37.5", "Number of CDSs": "2854", "Average Protein Length": "300.8", "Coding Ratio (%)": "87.5", "Number of rRNAs": "0", "Number of tRNAs": "51", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Enterococcus faecalis", "strain": "strain=NCTC 775", "accession": "GCA_015311765.1", "taxid": 1351, "species_taxid": 1351, "relation_to_type": "type", "validated": true, "ani": 100.0, 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