{ "tc_result": [ { "organism_name": "Noviherbaspirillum malthae", "strain": "strain=CC-AFH3", "accession": "GCA_015352985.1", "taxid": 1260987, "species_taxid": 1260987, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2626, "total_fragments": 2635, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Noviherbaspirillum aerium", "strain": "strain=122213-3", "accession": "GCA_008929045.1", "taxid": 2588497, "species_taxid": 2588497, "relation_to_type": "type", "validated": true, "ani": 86.7866, "matched_fragments": 1642, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum aridicola", "strain": "strain=NCCP-691", "accession": "GCA_019656455.1", "taxid": 2849687, "species_taxid": 2849687, "relation_to_type": "type", "validated": true, "ani": 81.7334, "matched_fragments": 828, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum denitrificans", "strain": "strain=TSA40", "accession": "GCA_002211445.1", "taxid": 1968433, "species_taxid": 1968433, "relation_to_type": "type", "validated": true, "ani": 80.8649, "matched_fragments": 814, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum galbum", "strain": "strain=17J57-3", "accession": "GCA_010974945.1", "taxid": 2709383, "species_taxid": 2709383, "relation_to_type": "type", "validated": true, "ani": 80.7817, "matched_fragments": 836, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum humi", "strain": "strain=U15", "accession": "GCA_900188095.1", "taxid": 1688639, "species_taxid": 1688639, "relation_to_type": "type", "validated": true, "ani": 80.6615, "matched_fragments": 779, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum saxi", "strain": "strain=K1R23-30", "accession": "GCA_003591035.1", "taxid": 2320863, "species_taxid": 2320863, "relation_to_type": "type", "validated": true, "ani": 80.6201, "matched_fragments": 853, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum autotrophicum", "strain": "strain=TSA66", "accession": "GCA_000818395.1", "taxid": 709839, "species_taxid": 709839, "relation_to_type": "type", "validated": true, "ani": 80.1743, "matched_fragments": 707, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum cavernae", "strain": "strain=K2R10-39", "accession": "GCA_003590875.1", "taxid": 2320862, "species_taxid": 2320862, "relation_to_type": "type", "validated": true, "ani": 80.1399, "matched_fragments": 648, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum pedocola", "strain": "strain=DKR-6", "accession": "GCA_016632335.1", "taxid": 2801341, "species_taxid": 2801341, "relation_to_type": "type", "validated": true, "ani": 79.4841, "matched_fragments": 686, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbaspirillum lusitanum", "strain": "strain=P6-12", "accession": "GCA_000256565.1", "taxid": 213312, "species_taxid": 213312, "relation_to_type": "type", "validated": true, "ani": 79.4578, "matched_fragments": 474, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbaspirillum rhizosphaerae", "strain": "strain=UMS-37", "accession": "GCA_001189965.1", "taxid": 346179, "species_taxid": 346179, "relation_to_type": "type", "validated": true, "ani": 79.0711, "matched_fragments": 551, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia cavernae", "strain": "strain=K1S02-61", "accession": "GCA_003590855.1", "taxid": 2320864, "species_taxid": 2320864, "relation_to_type": "type", "validated": true, "ani": 78.9782, "matched_fragments": 523, "total_fragments": 2635, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_015352985.1", "gtdb_species": "s__Noviherbaspirillum malthae", "ani": 100.0, "matched_fragments": 2626, "total_fragments": 2635, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Noviherbaspirillum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_008929045.1", "gtdb_species": "s__Noviherbaspirillum aerium", "ani": 86.7657, "matched_fragments": 1645, "total_fragments": 2635, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Herbaspirillum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002701395.1", "gtdb_species": "s__Rhodobacter_B sp002701395", "ani": 75.2956, "matched_fragments": 92, "total_fragments": 2635, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }