{ "type": "genome", "identifier": "GCF_015694735.1", "organism": "Hymenobacter properus", "title": "Hymenobacter properus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Seoul Women's University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_015694735.1", "bioproject": "PRJNA224116", "biosample": "SAMN16833475", "wgs_master": "JADQDP000000000.1", "refseq_category": "reference genome", "taxid": "2791026", "species_taxid": "2791026", "organism_name": "Hymenobacter properus", "infraspecific_name": "strain=BT439", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/11/29", "asm_name": "ASM1569473v1", "asm_submitter": "Seoul Women's University", "gbrs_paired_asm": "GCA_015694735.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/015/694/735/GCF_015694735.1_ASM1569473v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5542738", "genome_size_ungapped": "5542738", "gc_percent": "61.500000", "replicon_count": "0", "scaffold_count": "9", "contig_count": "9", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_015694735.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "4626", "protein_coding_gene_count": "4564", "non_coding_gene_count": "45", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-11-29", "dateModified": "2020-11-29", "datePublished": "2020-11-29", "_annotation": { "sample_count": 1, "sample_organism": [ "Hymenobacter properus" ], "sample_taxid": [ "2791026" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea: Busan" ], "sample_host_location_id": [], "data_size": "1.542 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5542738", "Number of Sequences": "9", "Longest Sequences (bp)": "1483909", "N50 (bp)": "1410877", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "61.7", "Number of CDSs": "4596", "Average Protein Length": "353.8", "Coding Ratio (%)": "88.0", "Number of rRNAs": "0", "Number of tRNAs": "44", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Hymenobacter properus", "strain": "strain=BT439", "accession": "GCA_015694735.1", "taxid": 2791026, "species_taxid": 2791026, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1843, "total_fragments": 1843, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Hymenobacter armeniacus", "strain": "strain=BT189", "accession": "GCA_014699055.1", "taxid": 2771358, "species_taxid": 2771358, "relation_to_type": "type", "validated": true, "ani": 86.1195, "matched_fragments": 1349, "total_fragments": 1843, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter ruricola", "strain": "strain=BT662", "accession": "GCA_015694525.1", "taxid": 2791023, "species_taxid": 2791023, "relation_to_type": "type", "validated": true, "ani": 85.9827, "matched_fragments": 1398, "total_fragments": 1843, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter rubidus", "strain": "strain=DG7B", "accession": "GCA_016734815.1", "taxid": 1441626, "species_taxid": 1441626, "relation_to_type": "type", "validated": true, "ani": 84.6001, "matched_fragments": 1297, "total_fragments": 1843, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter 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"GCA_001816165.1", "taxid": 1908236, "species_taxid": 1908236, "relation_to_type": "type", "validated": true, "ani": 82.7793, "matched_fragments": 969, "total_fragments": 1843, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter jeongseonensis", "strain": "strain=BT683", "accession": "GCA_015694725.1", "taxid": 2791027, "species_taxid": 2791027, "relation_to_type": "type", "validated": true, "ani": 82.1609, "matched_fragments": 1067, "total_fragments": 1843, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter montanus", "strain": "strain=BT664", "accession": "GCA_014699115.1", "taxid": 2771359, "species_taxid": 2771359, "relation_to_type": "type", "validated": true, "ani": 81.3701, "matched_fragments": 951, "total_fragments": 1843, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter metallicola", "strain": "strain=9PBR-1", "accession": "GCA_004745645.1", "taxid": 2563114, "species_taxid": 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