{ "type": "genome", "identifier": "GCF_015751895.1", "organism": "Zhihengliuella flava", "title": "Zhihengliuella flava", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_015751895.1", "bioproject": "PRJNA224116", "biosample": "SAMN16774044", "wgs_master": "JADOTZ000000000.1", "refseq_category": "reference genome", "taxid": "1285193", "species_taxid": "1285193", "organism_name": "Zhihengliuella flava", "infraspecific_name": "strain=DSM 26152", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/12/04", "asm_name": "ASM1575189v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_015751895.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/015/751/895/GCF_015751895.1_ASM1575189v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2895551", "genome_size_ungapped": "2895551", "gc_percent": "66.500000", "replicon_count": "0", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_015751895.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "2690", "protein_coding_gene_count": "2619", "non_coding_gene_count": "62", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-12-04", "dateModified": "2020-12-04", "datePublished": "2020-12-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Zhihengliuella flava" ], "sample_taxid": [ "1285193" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "0.801 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2895551", "Number of Sequences": "1", "Longest Sequences (bp)": "2895551", "N50 (bp)": "2895551", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "66.4", "Number of CDSs": "2660", "Average Protein Length": "331.5", "Coding Ratio (%)": "91.4", "Number of rRNAs": "9", "Number of tRNAs": "58", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Zhihengliuella flava", "strain": "strain=DSM 26152", "accession": "GCA_015751895.1", "taxid": 1285193, "species_taxid": 1285193, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 962, "total_fragments": 965, 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"Haematomicrobium sanguinis", "strain": "strain=DSM 21259", "accession": "GCA_000688395.1", "taxid": 479106, "species_taxid": 479106, "relation_to_type": "type", "validated": true, "ani": 77.8007, "matched_fragments": 81, "total_fragments": 965, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Galactobacter valiniphilus", "strain": "strain=JZ R-35", "accession": "GCA_003575975.1", "taxid": 2676122, "species_taxid": 2676122, "relation_to_type": "type", "validated": true, "ani": 77.7142, "matched_fragments": 238, "total_fragments": 965, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paeniglutamicibacter gangotriensis", "strain": "strain=Lz1y", "accession": "GCA_000348945.1", "taxid": 254787, "species_taxid": 254787, "relation_to_type": "type", "validated": true, "ani": 77.6866, "matched_fragments": 180, "total_fragments": 965, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glutamicibacter protophormiae", "strain": 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