{ "type": "genome", "identifier": "GCF_016028755.1", "organism": "Moraxella osloensis", "title": "Moraxella osloensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "US Food and Drug Administration", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016028755.1", "bioproject": "PRJNA224116", "biosample": "SAMN13450400", "wgs_master": "na", "refseq_category": "na", "taxid": "34062", "species_taxid": "34062", "organism_name": "Moraxella osloensis", "infraspecific_name": "strain=FDAARGOS_870", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/12/14", "asm_name": "ASM1602875v1", "asm_submitter": "US Food and Drug Administration", "gbrs_paired_asm": "GCA_016028755.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/028/755/GCF_016028755.1_ASM1602875v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2435828", "genome_size_ungapped": "2435828", "gc_percent": "44.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016028755.1-RS_2024_11_28", "annotation_date": "2024-11-28", "total_gene_count": "2172", "protein_coding_gene_count": "2069", "non_coding_gene_count": "63", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-12-14", "dateModified": "2020-12-14", "datePublished": "2020-12-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Moraxella osloensis" ], "sample_taxid": [ "34062" ], "sample_host_organism": [ "missing" ], "sample_host_organism_id": [], "sample_host_disease": [ "Unknown", "Unknown" ], "sample_host_disease_id": [], "sample_host_location": [ "Not applicable" ], "sample_host_location_id": [], "data_size": "0.686 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2435828", "Number of Sequences": "1", "Longest Sequences (bp)": "2435828", "N50 (bp)": "2435828", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "43.9", "Number of CDSs": "2106", "Average Protein Length": "327.0", "Coding Ratio (%)": "84.8", "Number of rRNAs": "12", "Number of tRNAs": "47", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Moraxella osloensis", "strain": "strain=FDAARGOS_870", "accession": "GCA_016028755.1", "taxid": 34062, "species_taxid": 34062, "relation_to_type": "suspected-type", "validated": true, "ani": 100.0, "matched_fragments": 811, "total_fragments": 811, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Moraxella osloensis", "strain": "strain=NCTC10465", "accession": "GCA_900453115.1", "taxid": 34062, "species_taxid": 34062, "relation_to_type": "suspected-type", "validated": true, "ani": 99.9982, "matched_fragments": 808, "total_fragments": 811, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Moraxella osloensis", "strain": "strain=CCUG 350", "accession": "GCA_001553955.1", "taxid": 34062, "species_taxid": 34062, "relation_to_type": "suspected-type", "validated": true, "ani": 99.996, "matched_fragments": 810, "total_fragments": 811, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Moraxella osloensis", "strain": "strain=CCUG 350", "accession": "GCA_001679175.1", "taxid": 34062, "species_taxid": 34062, "relation_to_type": "suspected-type", "validated": true, "ani": 99.9542, "matched_fragments": 767, "total_fragments": 811, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Moraxella boevrei", "strain": "strain=DSM 14165", "accession": "GCA_000379845.1", "taxid": 346665, "species_taxid": 346665, "relation_to_type": "type", "validated": true, "ani": 77.5452, "matched_fragments": 151, "total_fragments": 811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Moraxella caviae", "strain": "strain=NCTC10293", "accession": "GCA_900453175.1", "taxid": 34060, "species_taxid": 34060, "relation_to_type": "type", "validated": true, "ani": 77.511, "matched_fragments": 81, "total_fragments": 811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Psychrobacter fozii", "strain": "strain=CECT 5889", "accession": "GCA_003217155.1", "taxid": 198480, "species_taxid": 198480, "relation_to_type": "type", "validated": true, "ani": 76.7542, "matched_fragments": 67, "total_fragments": 811, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Psychrobacter communis", "strain": "strain=Sa4CVA2", 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