{ "type": "genome", "identifier": "GCF_016031615.1", "organism": "Streptomyces pactum", "title": "Streptomyces pactum", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Oregon State University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016031615.1", "bioproject": "PRJNA224116", "biosample": "SAMN16268219", "wgs_master": "JACYXC000000000.1", "refseq_category": "reference genome", "taxid": "68249", "species_taxid": "68249", "organism_name": "Streptomyces pactum", "infraspecific_name": "strain=ATCC 27456", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/12/14", "asm_name": "ASM1603161v1", "asm_submitter": "Oregon State University", "gbrs_paired_asm": "GCA_016031615.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/031/615/GCF_016031615.1_ASM1603161v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7808990", "genome_size_ungapped": "7808990", "gc_percent": "74.500000", "replicon_count": "0", "scaffold_count": "35", "contig_count": "35", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016031615.1-RS_2024_08_29", "annotation_date": "2024-08-29", "total_gene_count": "6138", "protein_coding_gene_count": "5745", "non_coding_gene_count": "85", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-12-14", "dateModified": "2020-12-14", "datePublished": "2020-12-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces pactum" ], "sample_taxid": [ "68249" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "unknown" ], 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"accession": "GCA_023218175.1", "taxid": 2306967, "species_taxid": 2306967, "relation_to_type": "type", "validated": true, "ani": 81.2372, "matched_fragments": 1302, "total_fragments": 2587, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces albulus", "strain": "strain=JCM 4718", "accession": "GCA_014650635.1", "taxid": 68570, "species_taxid": 68570, "relation_to_type": "suspected-type", "validated": true, "ani": 81.0205, "matched_fragments": 1372, "total_fragments": 2587, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces somaliensis", "strain": "strain=DSM 40738", "accession": "GCA_024349285.1", "taxid": 78355, "species_taxid": 78355, "relation_to_type": "type", "validated": true, "ani": 80.7649, "matched_fragments": 1057, "total_fragments": 2587, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces lycii", "strain": "strain=TRM 66187", "accession": "GCA_009735685.1", "taxid": 2654337, 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