{ "type": "genome", "identifier": "GCF_016031635.1", "organism": "Bradyrhizobium diversitatis", "title": "Bradyrhizobium diversitatis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Empresa Brasileira de Pesquisa Agropecuaria", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016031635.1", "bioproject": "PRJNA224116", "biosample": "SAMN15581659", "wgs_master": "JACEGD000000000.1", "refseq_category": "reference genome", "taxid": "2755406", "species_taxid": "2755406", "organism_name": "Bradyrhizobium diversitatis", "infraspecific_name": "strain=CNPSo 4019", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/12/14", "asm_name": "ASM1603163v1", "asm_submitter": "Empresa Brasileira de Pesquisa Agropecuaria", "gbrs_paired_asm": "GCA_016031635.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/031/635/GCF_016031635.1_ASM1603163v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "8450368", "genome_size_ungapped": "8450368", "gc_percent": "64.000000", "replicon_count": "0", "scaffold_count": "133", "contig_count": "133", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016031635.1-RS_2024_09_27", "annotation_date": "2024-09-27", "total_gene_count": "8053", "protein_coding_gene_count": "7731", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-12-14", "dateModified": "2020-12-14", "datePublished": "2020-12-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Bradyrhizobium diversitatis" ], "sample_taxid": [ "2755406" ], "sample_host_organism": [], 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"validated": true, "ani": 89.6077, "matched_fragments": 1939, "total_fragments": 2756, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium ottawaense", "strain": "strain=OO99", "accession": "GCA_002278135.2", "taxid": 931866, "species_taxid": 931866, "relation_to_type": "type", "validated": true, "ani": 89.2295, "matched_fragments": 1965, "total_fragments": 2756, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium shewense", "strain": "strain=ERR11", "accession": "GCA_900094605.1", "taxid": 1761772, "species_taxid": 1761772, "relation_to_type": "type", "validated": true, "ani": 89.1394, "matched_fragments": 1949, "total_fragments": 2756, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium nitroreducens", "strain": "strain=TSA1", "accession": "GCA_002776695.1", "taxid": 709803, "species_taxid": 709803, "relation_to_type": "type", "validated": true, "ani": 89.0881, 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"status": "below_threshold" }, { "organism_name": "Bradyrhizobium arachidis", "strain": "strain=LMG 26795", "accession": "GCA_900116675.1", "taxid": 858423, "species_taxid": 858423, "relation_to_type": "type", "validated": true, "ani": 88.512, "matched_fragments": 1923, "total_fragments": 2756, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium arachidis", "strain": "strain=CCBAU 051107", "accession": "GCA_015291705.1", "taxid": 858423, "species_taxid": 858423, "relation_to_type": "type", "validated": true, "ani": 88.5066, "matched_fragments": 1942, "total_fragments": 2756, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium betae", "strain": "strain=CECT 5829", "accession": "GCA_024806875.1", "taxid": 244734, "species_taxid": 244734, "relation_to_type": "type", "validated": true, "ani": 88.2534, "matched_fragments": 1700, "total_fragments": 2756, "ani_threshold": 95, "status": "below_threshold" }, { 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