{ "type": "genome", "identifier": "GCF_016106005.1", "organism": "Roseomonas rosulenta", "title": "Roseomonas rosulenta", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Mokwon University, Korea", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016106005.1", "bioproject": "PRJNA224116", "biosample": "SAMN15375093", "wgs_master": "JACADR000000000.1", "refseq_category": "reference genome", "taxid": "2748667", "species_taxid": "2748667", "organism_name": "Roseomonas rosulenta", "infraspecific_name": "strain=OP-27", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/12/17", "asm_name": "ASM1610600v1", "asm_submitter": "Mokwon University, Korea", "gbrs_paired_asm": "GCA_016106005.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/106/005/GCF_016106005.1_ASM1610600v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5277075", "genome_size_ungapped": "5277075", "gc_percent": "71.000000", "replicon_count": "0", "scaffold_count": "671", "contig_count": "671", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016106005.1-RS_2024_12_16", "annotation_date": "2024-12-16", "total_gene_count": "5506", "protein_coding_gene_count": "5229", "non_coding_gene_count": "56", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-12-17", "dateModified": "2020-12-17", "datePublished": "2020-12-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Roseomonas rosulenta" ], "sample_taxid": [ "2748667" ], "sample_host_organism": [ "paddy soil" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South 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"status": "below_threshold" }, { "organism_name": "Roseomonas oryzicola", "strain": "strain=KCTC 22478", "accession": "GCA_012163135.1", "taxid": 535904, "species_taxid": 535904, "relation_to_type": "type", "validated": true, "ani": 84.4862, "matched_fragments": 1036, "total_fragments": 1437, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas alkaliterrae", "strain": "strain=DSM 25895", "accession": "GCA_014199195.1", "taxid": 1452450, "species_taxid": 1452450, "relation_to_type": "type", "validated": true, "ani": 84.4733, "matched_fragments": 941, "total_fragments": 1437, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas lacus", "strain": "strain=CGMCC 1.3617", "accession": "GCA_014644535.1", "taxid": 287609, "species_taxid": 287609, "relation_to_type": "type", "validated": true, "ani": 82.9604, "matched_fragments": 1014, "total_fragments": 1437, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas hellenica", "strain": "strain=LMG 31523", "accession": "GCA_018129085.1", "taxid": 2687306, "species_taxid": 2687306, "relation_to_type": "type", "validated": true, "ani": 79.4671, "matched_fragments": 722, "total_fragments": 1437, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas cervicalis", "strain": "strain=ATCC 49957", "accession": "GCA_000164635.1", "taxid": 204525, "species_taxid": 204525, "relation_to_type": "type", "validated": true, "ani": 79.3514, "matched_fragments": 608, "total_fragments": 1437, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Falsiroseomonas frigidaquae", "strain": "strain=JCM 15073", "accession": "GCA_012163145.1", "taxid": 487318, "species_taxid": 487318, "relation_to_type": "type", "validated": true, "ani": 79.1915, "matched_fragments": 718, "total_fragments": 1437, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseococcus pinisoli", "strain": "strain=XZZS9", "accession": "GCA_018413645.1", "taxid": 2835040, "species_taxid": 2835040, "relation_to_type": "type", "validated": true, "ani": 78.9282, "matched_fragments": 555, "total_fragments": 1437, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Siccirubricoccus deserti", "strain": "strain=SYSU D8009", "accession": "GCA_014283215.1", "taxid": 2013562, "species_taxid": 2013562, "relation_to_type": "type", "validated": true, "ani": 78.9113, "matched_fragments": 684, "total_fragments": 1437, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas gilardii subsp. rosea", "strain": "strain=NCTC13290", "accession": "GCA_900455865.1", "taxid": 243956, "species_taxid": 257708, "relation_to_type": "type", "validated": true, "ani": 78.7863, "matched_fragments": 488, "total_fragments": 1437, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovarius lipocyclicus", "strain": "strain=CCUG 44693", "accession": "GCA_009900765.1", 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