# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_15	LOCUS_00150	sequence1:16229..17554(-)	partial			WP_005458040.1	PLP-dependent aminotransferase family protein	16.1	15.3	43.7
MGA_19	LOCUS_00190	sequence1:20063..20827(-)	partial			WP_013531243.1	iron ABC transporter permease	99.6	72.9	38.6
MGA_30	LOCUS_00300	sequence1:31622..32641(+)	partial			WP_012582820.1	pectinesterase family protein	52.8	38.3	25.6
MGA_31	LOCUS_00310	sequence1:32670..33689(+)	partial			WP_002681035.1	KHG/KDPG aldolase/sugar kinase fusion protein	99.7	57.3	59.2
MGA_43	LOCUS_00430	sequence1:45697..46605(+)	partial			WP_012259191.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	59.3	60.6	30.5
MGA_51	LOCUS_00510	sequence1:52168..55905(+)	partial			WP_011986302.1	SNF2 helicase associated domain-containing protein	73.3	83.6	35.6
MGA_54	LOCUS_00540	sequence1:57554..58837(-)	partial			WP_206819242.1	alpha-amylase family protein	89.2	68.8	45.3
MGA_56	LOCUS_00560	sequence1:59889..60728(-)	partial			WP_011707186.1	glutamate 5-kinase	90.0	68.4	40.2
MGA_64	LOCUS_00640	sequence1:66495..67883(+)	partial			WP_010942855.1	protein-glutamate O-methyltransferase CheR	40.0	66.1	29.8
MGA_66	LOCUS_00660	sequence1:69935..71770(+)	partial			WP_164924872.1	adenylate/guanylate cyclase domain-containing protein	51.6	45.7	37.0
MGA_67	LOCUS_00670	sequence1:71778..73553(+)	partial			WP_010943215.1	methyl-accepting chemotaxis protein	58.5	63.4	26.6
MGA_68	LOCUS_00680	sequence1:73556..75364(+)	partial			WP_118839896.1	methyl-accepting chemotaxis protein	50.5	47.4	28.7
MGA_79	LOCUS_00790	sequence1:87147..88181(-)	partial			WP_164922422.1	HNH endonuclease signature motif containing protein	30.5	48.6	39.3
MGA_84	LOCUS_00840	sequence1:95719..97914(+)	partial			WP_011014255.1	DUF262 domain-containing protein	16.6	18.8	32.8
MGA_106	LOCUS_01060	sequence1:121682..122146(+)	partial			WP_000793164.1	DUF3021 domain-containing protein	66.9	68.2	28.2
MGA_108	LOCUS_01080	sequence1:123584..124165(-)	partial			WP_010876687.1	TetR/AcrR family transcriptional regulator	50.3	46.6	31.6
MGA_118	LOCUS_01180	sequence1:131591..131848(+)	partial			WP_005814884.1	ATP-binding protein	56.5	11.1	43.8
MGA_122	LOCUS_01220	sequence1:137652..137819(+)	partial			WP_003436655.1	SprT family zinc-dependent metalloprotease	81.8	17.8	53.3
MGA_124	LOCUS_01240	sequence1:139985..140653(+)	partial			WP_011068386.1	AAA family ATPase	99.1	48.2	60.5
MGA_126	LOCUS_01260	sequence1:142436..143113(-)	partial			WP_011123362.1	restriction endonuclease subunit S	78.7	45.5	42.8
MGA_128	LOCUS_01280	sequence1:143493..143723(-)	partial			WP_011108603.1	virulence RhuM family protein	88.2	19.2	59.7
MGA_129	LOCUS_01290	sequence1:143889..145130(-)	frameshift,internal_stop_codon	143888..143890(-)	145165	WP_011948400.1	class I SAM-dependent DNA methyltransferase	98.5	83.3	53.2
MGA_131	LOCUS_01310	sequence1:145765..146226(+)	partial			WP_011203374.1	DUF3696 domain-containing protein	88.9	34.2	46.1
MGA_133	LOCUS_01330	sequence1:146780..146974(+)	internal_stop_codon	146972..146974(+)		WP_012257681.1	class I SAM-dependent DNA methyltransferase	87.5	10.6	46.4
MGA_134	LOCUS_01340	sequence1:147107..147283(+)	internal_stop_codon	146972..146974(+)		WP_012257681.1	class I SAM-dependent DNA methyltransferase	93.1	10.4	50.9
MGA_146	LOCUS_01460	sequence1:160182..160325(+)	frameshift		160322	WP_004298459.1	hypothetical protein	93.6	41.5	52.3
MGA_150	LOCUS_01500	sequence1:162557..163168(-)	partial			WP_002681377.1	virulence RhuM family protein	89.7	54.3	64.7
MGA_153	LOCUS_01530	sequence1:164206..164928(+)	frameshift		164053	WP_106004846.1	IS3 family transposase	93.8	59.9	47.1
MGA_156	LOCUS_01560	sequence1:166028..166321(+)	partial			WP_002668469.1	flagellar motor switch protein FliG	93.8	26.1	40.7
MGA_159	LOCUS_01590	sequence1:167834..170875(-)	partial			WP_164979579.1	AAA domain-containing protein	64.8	76.9	24.4
MGA_163	LOCUS_01630	sequence1:175053..176054(-)	partial			WP_005646006.1	ATP-binding protein	82.3	62.7	27.8
MGA_185	LOCUS_01850	sequence1:192495..193769(+)	partial			WP_003315078.1	lipoprotein-releasing ABC transporter permease subunit	67.5	69.2	24.6
MGA_192	LOCUS_01920	sequence1:198905..199552(+)	partial			WP_002680159.1	formylglycine-generating enzyme family protein	97.7	65.3	47.1
MGA_210	LOCUS_02100	sequence1:216445..218406(-)	partial			WP_001042403.1	McrB family protein	69.1	69.4	42.1
MGA_224	LOCUS_02240	sequence1:233182..233883(+)	partial			WP_011459432.1	putative ABC transporter permease	67.8	62.3	29.7
MGA_226	LOCUS_02260	sequence1:234998..235414(+)	partial			WP_002656070.1	polymer-forming cytoskeletal protein	65.2	68.1	33.7
MGA_229	LOCUS_02290	sequence1:236972..237895(-)	partial			WP_008765521.1	RluA family pseudouridine synthase	76.2	73.2	38.1
MGA_230	LOCUS_02300	sequence1:237994..238731(+)	partial			WP_226990826.1	class I SAM-dependent methyltransferase	66.9	66.7	24.7
MGA_233	LOCUS_02330	sequence1:240618..241610(-)	partial			WP_011072024.1	efflux RND transporter periplasmic adaptor subunit	73.9	73.7	21.5
MGA_250	LOCUS_02500	sequence1:262473..263246(-)	partial			WP_002666686.1	hypothetical protein	64.2	72.1	37.0
MGA_278	LOCUS_02780	sequence1:296444..296953(-)	internal_stop_codon	296963..296965(-)		WP_011458873.1	AraC family transcriptional regulator	100.0	55.4	41.2
MGA_279	LOCUS_02790	sequence1:297284..297493(+)	internal_stop_codon	297491..297493(+),297521..297523(+)		WP_002679544.1	integron integrase	100.0	16.2	52.2
MGA_280	LOCUS_02800	sequence1:297963..299219(+)	partial			WP_000589001.1	ISNCY family transposase	78.7	70.6	28.0
MGA_288	LOCUS_02880	sequence1:305992..308556(-)	partial			WP_005793695.1	hypothetical protein	10.4	11.5	40.4
MGA_310	LOCUS_03100	sequence1:318211..319899(-)	partial			WP_081708749.1	polymorphic toxin type 50 domain-containing protein	66.5	73.5	25.7
MGA_325	LOCUS_03250	sequence1:328612..328989(-)	partial			WP_002669349.1	single-stranded DNA-binding protein	92.8	69.0	53.4
MGA_333	LOCUS_03330	sequence1:336638..337396(+)	frameshift		337378	WP_002681281.1	hemolysin family protein	96.8	55.1	38.1
MGA_334	LOCUS_03340	sequence1:337428..337934(+)	frameshift		337390	WP_003687434.1	transporter associated domain-containing protein	91.1	55.8	32.0
MGA_349	LOCUS_03490	sequence1:353022..353546(+)	partial			WP_011250416.1	ATP-binding protein	98.3	36.7	34.1
MGA_355	LOCUS_03550	sequence1:357217..357654(-)	partial			WP_008764890.1	DUF3737 family protein	82.8	42.2	48.8
MGA_356	LOCUS_03560	sequence1:357685..358152(+)	partial			WP_132283172.1	LysR family transcriptional regulator	98.7	52.6	52.9
MGA_357	LOCUS_03570	sequence1:358149..358970(+)	frameshift		358946	WP_011948376.1	DEAD/DEAH box helicase	90.5	24.0	35.6
MGA_358	LOCUS_03580	sequence1:358987..360588(+)	frameshift		358967	WP_011948376.1	DEAD/DEAH box helicase	93.2	50.8	51.8
MGA_360	LOCUS_03600	sequence1:361925..362608(+)	partial			WP_011014158.1	DUF3427 domain-containing protein	68.3	15.6	42.9
MGA_373	LOCUS_03730	sequence1:371554..371733(-)	partial			WP_195435952.1	ATP-binding protein	72.9	8.3	61.4
MGA_374	LOCUS_03740	sequence1:371681..371917(-)	partial			WP_008760930.1	ATP-binding protein	87.2	12.9	57.4
MGA_378	LOCUS_03780	sequence1:374367..374678(-)	partial			WP_003021760.1	DEAD/DEAH box helicase	96.1	9.9	49.5
MGA_380	LOCUS_03800	sequence1:376017..376229(-)	partial			WP_010920580.1	helix-turn-helix transcriptional regulator	95.7	23.6	44.8
MGA_381	LOCUS_03810	sequence1:377045..378403(+)	partial			WP_011203404.1	DNA (cytosine-5-)-methyltransferase	46.9	50.8	41.2
MGA_383	LOCUS_03830	sequence1:379952..382096(+)	partial			WP_096456417.1	Z1 domain-containing protein	69.7	74.4	26.4
MGA_394	LOCUS_03940	sequence1:392648..394744(+)	partial			WP_002679969.1	methyl-accepting chemotaxis protein	65.9	63.9	35.4
MGA_395	LOCUS_03950	sequence1:394804..395679(-)	partial			WP_002679986.1	LysM peptidoglycan-binding domain-containing protein	86.6	57.1	39.9
MGA_404	LOCUS_04040	sequence1:404810..407974(+)	partial			WP_164920602.1	FlgD immunoglobulin-like domain containing protein	97.6	74.3	38.3
MGA_417	LOCUS_04170	sequence1:419111..420031(+)	partial			WP_164921637.1	DUF4349 domain-containing protein	71.2	75.7	23.0
MGA_438	LOCUS_04380	sequence1:442742..443224(-)	partial			WP_007339883.1	single-stranded DNA-binding protein	83.1	74.6	36.1
MGA_441	LOCUS_04410	sequence1:446713..447744(+)	partial			WP_044977758.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	75.2	71.6	39.4
MGA_476	LOCUS_04760	sequence1:488858..490471(+)	partial			WP_011106517.1	VWA domain-containing protein	36.9	32.0	26.4
MGA_479	LOCUS_04790	sequence1:492482..493075(+)	partial			WP_032828442.1	molecular chaperone DnaJ	59.4	28.5	45.3
MGA_481	LOCUS_04810	sequence1:493514..493870(+)	partial			WP_011028128.1	TraR/DksA family transcriptional regulator	61.9	30.5	49.3
MGA_483	LOCUS_04830	sequence1:494703..496643(-)	partial			WP_011706261.1	response regulator	96.1	67.5	29.1
MGA_492	LOCUS_04920	sequence1:506798..508840(-)	partial			WP_011203461.1	4-alpha-glucanotransferase	98.1	72.4	30.8
MGA_500	LOCUS_05000	sequence1:514433..515398(+)	partial			WP_002680489.1	TPM domain-containing protein	54.5	65.2	40.6
MGA_531	LOCUS_05310	sequence1:543203..549592(+)	partial			WP_002680753.1	Ig-like domain-containing protein	34.6	44.3	33.0
MGA_535	LOCUS_05350	sequence1:554977..557289(+)	partial			WP_004082388.1	glycogen-binding domain-containing protein	15.8	16.8	40.7
MGA_537	LOCUS_05370	sequence1:558816..561179(+)	partial			WP_010922388.1	alpha-amylase AmyA	65.4	68.2	33.5
MGA_554	LOCUS_05540	sequence1:580338..582806(+)	partial			WP_011706045.1	PAS domain S-box protein	46.2	28.1	41.8
MGA_576	LOCUS_05760	sequence1:615085..615816(+)	frameshift,internal_stop_codon	615814..615816(+)	615825	WP_011203619.1	IS1182-like element ISBf5 family transposase	96.7	41.4	44.7
MGA_577	LOCUS_05770	sequence1:615936..616676(+)	frameshift		616655	WP_000284571.1	IS1182-like element IS1182 family transposase	98.4	45.7	44.9
MGA_592	LOCUS_05920	sequence1:633656..636400(+)	partial			WP_011836521.1	pullulanase	93.4	72.2	34.9
MGA_632	LOCUS_06320	sequence1:675111..675386(+)	partial			WP_002667812.1	HD-GYP domain-containing protein	63.7	13.8	43.1
MGA_635	LOCUS_06350	sequence1:676005..676481(+)	partial			WP_002680218.1	hypothetical protein	69.0	74.0	42.3
MGA_659	LOCUS_06590	sequence1:704071..705366(-)	partial			WP_000589001.1	ISNCY family transposase	79.6	74.4	29.8
MGA_686	LOCUS_06860	sequence1:731044..731409(+)	partial			WP_000516895.1	helix-turn-helix transcriptional regulator	78.5	58.3	44.2
MGA_691	LOCUS_06910	sequence1:735487..736698(+)	partial			WP_010920535.1	P-type conjugative transfer protein TrbG	64.3	78.6	27.9
MGA_693	LOCUS_06930	sequence1:737326..739122(+)	partial			WP_015664062.1	TrbI/VirB10 family protein	37.6	56.3	32.6
MGA_700	LOCUS_07000	sequence1:755715..756038(+)	partial			WP_196835716.1	adenine-specific methyltransferase EcoRI family protein	75.7	18.1	42.2
MGA_728	LOCUS_07280	sequence1:785332..785985(-)	partial			WP_001900033.1	tRNA-uridine aminocarboxypropyltransferase	54.4	49.0	29.2
MGA_761	LOCUS_07610	sequence1:823994..825421(-)	partial			WP_003243306.1	capsular polyglutamate synthetase PgsA	50.9	62.1	31.8
MGA_788	LOCUS_07880	sequence1:858420..859181(+)	partial			WP_011027061.1	glycoside hydrolase family 127 protein	68.8	20.5	29.1
MGA_793	LOCUS_07930	sequence1:862316..864109(+)	partial			WP_012584076.1	arabinan endo-1,5-alpha-L-arabinosidase	54.3	57.8	28.0
MGA_803	LOCUS_08030	sequence1:875159..878701(+)	partial			WP_010966680.1	HD-GYP domain-containing protein	17.5	78.5	45.2
MGA_804	LOCUS_08040	sequence1:878713..879915(+)	partial			WP_048064307.1	BMP family ABC transporter substrate-binding protein	71.5	71.2	32.4
MGA_828	LOCUS_08280	sequence1:911280..912617(+)	partial			WP_005482837.1	pseudouridine synthase	73.0	58.7	36.8
MGA_829	LOCUS_08290	sequence1:912872..914209(+)	partial			WP_012583098.1	ASKHA domain-containing protein	88.1	67.2	32.6
MGA_832	LOCUS_08320	sequence1:917767..918234(+)	partial			WP_010941396.1	PTS sugar transporter subunit IIA	85.2	58.7	34.8
MGA_859	LOCUS_08590	sequence1:953522..954577(-)	partial			WP_005786594.1	DNA/RNA non-specific endonuclease	72.4	83.2	39.6
MGA_862	LOCUS_08620	sequence1:957308..958315(+)	partial			WP_010940946.1	B12-binding domain-containing radical SAM protein	82.1	47.0	25.2
MGA_865	LOCUS_08650	sequence1:960132..962204(+)	partial			WP_002682089.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	63.2	64.3	58.0
MGA_880	LOCUS_08800	sequence1:979793..980452(+)	frameshift		980440	WP_002679466.1	nicotinate-nucleotide adenylyltransferase	100.0	48.9	38.8
MGA_881	LOCUS_08810	sequence1:980439..981065(+)	frameshift		980440	WP_002679466.1	nicotinate-nucleotide adenylyltransferase	88.5	45.7	40.6
MGA_902	LOCUS_09020	sequence1:1014800..1016590(+)	partial			WP_002678734.1	HDIG domain-containing protein	82.2	63.2	49.0
MGA_933	LOCUS_09330	sequence1:1054637..1055176(+)	partial			WP_002682284.1	ComF family protein	90.5	58.5	35.9
MGA_955	LOCUS_09550	sequence1:1080381..1082027(-)	partial			WP_010869524.1	fumarate reductase subunit A	73.7	72.9	38.6
MGA_956	LOCUS_09560	sequence1:1082121..1082801(-)	partial			WP_011948145.1	electron transport complex subunit RsxC	38.9	19.1	37.1
MGA_962	LOCUS_09620	sequence1:1088179..1088574(-)	partial			WP_010940769.1	4Fe-4S dicluster domain-containing protein	74.0	50.0	36.1
MGA_970	LOCUS_09700	sequence1:1096291..1096623(+)	partial			WP_226986832.1	HU family DNA-binding protein	80.9	74.6	41.6
MGA_972	LOCUS_09720	sequence1:1097317..1099101(+)	partial			WP_002668994.1	transcription termination factor Rho	73.1	79.2	75.6
MGA_1003	LOCUS_10030	sequence1:1142617..1143414(+)	partial			WP_010940760.1	peptidoglycan editing factor PgeF	69.8	72.9	35.4
MGA_1013	LOCUS_10130	sequence1:1153345..1154952(-)	partial			WP_002673491.1	hypothetical protein	47.3	45.0	36.8
MGA_1022	LOCUS_10220	sequence1:1174351..1174749(+)	partial			WP_002673332.1	GNAT family N-acetyltransferase	75.0	69.9	47.1
MGA_1025	LOCUS_10250	sequence1:1177595..1178194(+)	frameshift,internal_stop_codon	1177441..1177443(+),1177519..1177521(+)	1177386,1177479	WP_002287470.1	LysR family transcriptional regulator	86.9	58.3	31.8
MGA_1026	LOCUS_10260	sequence1:1178401..1178820(+)	partial			WP_011020463.1	sugar O-acetyltransferase	92.1	68.1	42.3
MGA_1027	LOCUS_10270	sequence1:1178823..1180493(-)	internal_stop_codon	1180590..1180592(-)		WP_010941424.1	ATP-dependent RecD-like DNA helicase	99.5	57.8	43.9
MGA_1028	LOCUS_10280	sequence1:1180590..1181651(-)	internal_stop_codon	1180590..1180592(-)		WP_010941424.1	ATP-dependent RecD-like DNA helicase	96.9	37.7	39.7
MGA_1029	LOCUS_10290	sequence1:1181692..1182441(-)	partial			WP_041272556.1	recombinase family protein	98.4	46.6	37.6
MGA_1030	LOCUS_10300	sequence1:1183333..1183830(-)	internal_stop_codon	1183837..1183839(-)		WP_008764890.1	DUF3737 family protein	79.4	46.0	47.0
MGA_1031	LOCUS_10310	sequence1:1183837..1184232(-)	internal_stop_codon	1183837..1183839(-)		WP_008764890.1	DUF3737 family protein	99.2	44.6	40.5
MGA_1036	LOCUS_10360	sequence1:1187209..1187616(+)	partial			WP_011202637.1	carboxymuconolactone decarboxylase family protein	90.4	44.9	59.8
MGA_1039	LOCUS_10390	sequence1:1189080..1189352(+)	partial			WP_011202637.1	carboxymuconolactone decarboxylase family protein	58.9	19.5	73.6
MGA_1040	LOCUS_10400	sequence1:1189554..1189772(+)	internal_stop_codon	1189539..1189541(+),1189350..1189352(+)		WP_011020461.1	flavodoxin	95.8	38.0	39.1
MGA_1042	LOCUS_10420	sequence1:1191764..1192795(+)	partial			WP_005902331.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	17.5	8.1	43.3
MGA_1045	LOCUS_10450	sequence1:1193927..1194511(-)	partial			WP_011109350.1	ATP-binding protein	93.8	32.6	28.0
MGA_1050	LOCUS_10500	sequence1:1199924..1200382(-)	partial			WP_010880882.1	glycerol-3-phosphate cytidylyltransferase	81.6	73.8	46.4
MGA_1063	LOCUS_10630	sequence1:1219335..1221896(+)	partial			WP_003436710.1	EAL domain-containing protein	49.5	58.3	34.7
MGA_1075	LOCUS_10750	sequence1:1231674..1232693(-)	frameshift		1232773	WP_002658381.1	AI-2E family transporter	90.0	81.8	28.5
MGA_1080	LOCUS_10800	sequence1:1239341..1240411(-)	frameshift		1240361	WP_041272331.1	DEAD/DEAH box helicase	94.9	74.3	35.0
MGA_1105	LOCUS_11050	sequence1:1263125..1263745(-)	partial			WP_012546261.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	82.0	73.8	29.3
MGA_1110	LOCUS_11100	sequence1:1267248..1267622(-)	partial			WP_002668949.1	flagellar protein FlaG	57.3	56.1	47.9
MGA_1128	LOCUS_11270	sequence1:1284084..1286060(-)	partial			WP_002682271.1	hypothetical protein	58.7	60.1	24.3
MGA_1134	LOCUS_11330	sequence1:1291431..1292429(-)	partial			WP_002680034.1	M23 family metallopeptidase	55.1	57.9	42.6
MGA_1140	LOCUS_11390	sequence1:1298066..1299259(+)	partial			WP_011202289.1	AAA family ATPase	84.1	59.4	25.4
MGA_1146	LOCUS_11450	sequence1:1302103..1302537(+)	partial			WP_012972501.1	DUF262 domain-containing protein	50.7	34.1	58.9
MGA_1157	LOCUS_11560	sequence1:1313585..1314112(+)	partial			WP_013530975.1	DapH/DapD/GlmU-related protein	64.0	60.6	39.5
MGA_1168	LOCUS_11670	sequence1:1323193..1324200(+)	partial			WP_000908873.1	glycosyltransferase	71.6	74.0	38.9
MGA_1169	LOCUS_11680	sequence1:1324353..1325141(-)	partial			WP_187437126.1	IS256 family transposase	34.7	21.3	54.9
MGA_1170	LOCUS_11690	sequence1:1325330..1325599(-)	partial			WP_011140154.1	IS982 family transposase	93.3	28.5	44.6
MGA_1178	LOCUS_11770	sequence1:1334890..1335684(-)	frameshift,internal_stop_codon	1335781..1335783(-)	1335786,1335645	WP_152609748.1	IS3 family transposase	94.7	64.9	44.0
MGA_1189	LOCUS_11880	sequence1:1345085..1345846(+)	partial			WP_011986838.1	thiamine diphosphokinase	49.4	51.9	36.5
MGA_1216	LOCUS_12150	sequence1:1375093..1375701(+)	partial			WP_010940063.1	Fe-S cluster domain-containing protein	55.9	39.7	34.2
MGA_1221	LOCUS_12200	sequence1:1382275..1383393(-)	partial			WP_011250060.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	97.0	73.3	34.5
MGA_1226	LOCUS_12250	sequence1:1389465..1390583(-)	partial			WP_002680259.1	RIP metalloprotease RseP	75.8	62.0	40.5
MGA_1235	LOCUS_12340	sequence1:1397496..1398089(-)	partial			WP_002667723.1	lipoprotein	67.0	66.3	32.8
MGA_1248	LOCUS_12470	sequence1:1407024..1410815(-)	partial			WP_002678792.1	transcription-repair coupling factor	71.3	76.6	59.6
MGA_1251	LOCUS_12500	sequence1:1412497..1413255(-)	partial			WP_003575124.1	RluA family pseudouridine synthase	94.0	65.0	25.7
MGA_1253	LOCUS_12520	sequence1:1414237..1414761(-)	partial			WP_002682391.1	hypothetical protein	61.5	68.6	36.2
MGA_1256	LOCUS_12550	sequence1:1416397..1417671(-)	partial			WP_010956948.1	ComEC/Rec2 family competence protein	72.2	57.6	37.1
MGA_1315	LOCUS_13140	sequence1:1482068..1483480(+)	partial			WP_005812190.1	HAMP domain-containing sensor histidine kinase	64.7	64.2	31.9
MGA_1320	LOCUS_13190	sequence1:1486846..1488426(+)	partial			WP_011458936.1	ATP-binding protein	49.6	64.7	45.5
MGA_1333	LOCUS_13320	sequence1:1502250..1503218(+)	partial			WP_011922118.1	glycosyltransferase family 2 protein	65.5	64.1	35.5
MGA_1334	LOCUS_13330	sequence1:1503215..1504216(+)	partial			WP_009895871.1	glycosyltransferase family 4 protein	50.2	43.8	31.7
MGA_1335	LOCUS_13340	sequence1:1504360..1505616(+)	partial			WP_000589001.1	ISNCY family transposase	78.7	70.6	28.1
MGA_1345	LOCUS_13440	sequence1:1514864..1517428(-)	partial			WP_005793695.1	hypothetical protein	10.4	11.5	40.4
MGA_1383	LOCUS_13820	sequence1:1538065..1538442(-)	partial			WP_002669349.1	single-stranded DNA-binding protein	92.8	69.0	53.4
MGA_1405	LOCUS_14040	sequence1:1560611..1561150(-)	partial			WP_002679371.1	50S ribosomal protein L9	82.7	74.4	62.8
MGA_1410	LOCUS_14090	sequence1:1563693..1565354(+)	partial			WP_011038574.1	quinoprotein dehydrogenase-associated putative ABC transporter substrate-binding protein	17.5	16.3	42.9
MGA_1422	LOCUS_14210	sequence1:1574881..1575432(-)	partial			WP_002682322.1	rod-binding protein	72.1	66.0	44.5
MGA_1425	LOCUS_14240	sequence1:1577281..1579563(+)	partial			WP_011861273.1	bifunctional diguanylate cyclase/phosphodiesterase	56.2	81.9	39.1
MGA_1437	LOCUS_14360	sequence1:1591728..1593089(-)	partial			WP_002680832.1	flagellar hook-length control protein FliK	82.6	74.4	28.3
MGA_1482	LOCUS_14810	sequence1:1658622..1660421(-)	partial			WP_002682434.1	SPOR domain-containing protein	58.8	67.9	25.3
MGA_1492	LOCUS_14910	sequence1:1670584..1672650(-)	partial			WP_002658100.1	methyl-accepting chemotaxis protein	73.3	71.2	28.6
MGA_1533	LOCUS_15320	sequence1:1717773..1718873(-)	partial			WP_010989989.1	Fe-S cluster assembly protein SufD	60.9	51.5	24.7
MGA_1563	LOCUS_15620	sequence1:1758813..1759373(+)	partial			WP_003129648.1	SGNH/GDSL hydrolase family protein	62.4	52.2	25.4
MGA_1570	LOCUS_15690	sequence1:1766908..1767240(-)	partial			WP_002671660.1	flagellar hook-basal body complex protein FliE	70.0	63.6	44.2
MGA_1577	LOCUS_15760	sequence1:1772332..1773579(+)	partial			WP_012870274.1	restriction endonuclease subunit S	44.3	49.5	47.8
MGA_1578	LOCUS_15770	sequence1:1773668..1774183(+)	partial			WP_005694081.1	restriction endonuclease subunit S	98.2	43.6	63.1
MGA_1585	LOCUS_15840	sequence1:1783839..1785227(-)	partial			WP_002656388.1	cell division protein FtsZ	67.7	77.4	51.4
MGA_1609	LOCUS_16080	sequence1:1806168..1807814(-)	partial			WP_011392429.1	Stk1 family PASTA domain-containing Ser/Thr kinase	57.8	48.4	33.9
MGA_1611	LOCUS_16100	sequence1:1809133..1809477(-)	partial			WP_010963826.1	FHA domain-containing protein	61.4	42.8	45.7
MGA_1625	LOCUS_16240	sequence1:1822509..1824086(-)	frameshift,internal_stop_codon	1824093..1824095(-)	1824126	WP_048146532.1	FAD-dependent oxidoreductase	65.0	72.0	47.2
MGA_1629	LOCUS_16280	sequence1:1828614..1828772(-)	partial			WP_048146653.1	D-2-hydroxyacid dehydrogenase	67.3	11.5	68.6
MGA_1634	LOCUS_16330	sequence1:1831369..1832286(-)	partial			WP_003568253.1	ABC transporter permease subunit	84.3	46.2	31.2
MGA_1645	LOCUS_16440	sequence1:1846114..1848036(-)	partial			WP_002682411.1	tRNA pseudouridine(55) synthase TruB	46.6	84.9	37.7
MGA_1650	LOCUS_16490	sequence1:1853318..1853998(-)	partial			WP_002225965.1	RluA family pseudouridine synthase	92.0	66.4	37.7
MGA_1661	LOCUS_16600	sequence1:1866059..1868842(+)	partial			WP_011109117.1	hybrid sensor histidine kinase/response regulator transcription factor	44.3	29.2	21.2
MGA_1665	LOCUS_16640	sequence1:1873504..1874742(-)	partial			WP_002680821.1	M23 family metallopeptidase	71.6	83.2	44.8
MGA_1670	LOCUS_16690	sequence1:1880624..1881406(-)	partial			WP_010942020.1	aldo/keto reductase	98.5	71.7	29.5
MGA_1674	LOCUS_16730	sequence1:1884728..1885456(+)	frameshift		1884744	WP_002682256.1	BMP family ABC transporter substrate-binding protein	97.9	71.0	46.5
MGA_1699	LOCUS_16980	sequence1:1912613..1913071(-)	partial			WP_003232350.1	PTS fructose transporter subunit IIABC	99.3	23.8	39.7
MGA_1701	LOCUS_17000	sequence1:1913606..1915624(-)	partial			WP_011070895.1	GGDEF domain-containing protein	62.1	64.0	25.3
MGA_1711	LOCUS_17100	sequence1:1923715..1924050(-)	partial			WP_201778961.1	RNA-binding protein	70.3	56.1	48.7
MGA_1712	LOCUS_17110	sequence1:1924183..1925226(-)	partial			WP_001229174.1	adenosine deaminase	92.2	72.2	44.1
MGA_1720	LOCUS_17190	sequence1:1936426..1936965(-)	partial			WP_002682373.1	methionine--tRNA ligase	96.1	22.8	40.7
MGA_1745	LOCUS_17440	sequence1:1973288..1974448(+)	partial			WP_002286665.1	Xaa-Pro peptidase family protein	67.1	71.5	37.3
MGA_1751	LOCUS_17500	sequence1:1984010..1984882(-)	partial			WP_002383750.1	glycosyltransferase	80.3	68.5	41.6
MGA_1754	LOCUS_17530	sequence1:1985627..1986172(-)	frameshift		1986296,1986218	WP_009039963.1	polysaccharide pyruvyl transferase family protein	93.9	44.8	31.1
MGA_1755	LOCUS_17540	sequence1:1986285..1986791(-)	frameshift		1986308,1986221	WP_011203004.1	polysaccharide pyruvyl transferase family protein	97.0	38.5	31.9
MGA_1774	LOCUS_17730	sequence1:2005058..2006509(-)	partial			WP_002680143.1	peptidase U32 family protein	71.8	83.6	59.0
MGA_1783	LOCUS_17820	sequence1:2013785..2015758(-)	partial			WP_012584100.1	diguanylate cyclase	43.7	26.6	26.4
MGA_1786	LOCUS_17850	sequence1:2018415..2019641(-)	partial			WP_002680471.1	divergent polysaccharide deacetylase family protein	71.8	76.7	40.4
MGA_1789	LOCUS_17880	sequence1:2021828..2033101(-)	partial			WP_001111655.1	Ig-like domain-containing protein	63.9	39.3	20.2
MGA_1803	LOCUS_18020	sequence1:2046003..2047265(+)	partial			WP_048064511.1	radical SAM protein	72.6	71.0	26.1
MGA_1806	LOCUS_18050	sequence1:2049347..2050027(+)	partial			WP_011948486.1	ABC transporter ATP-binding protein	90.7	69.6	34.9
MGA_1807	LOCUS_18060	sequence1:2050113..2050658(+)	frameshift		2050547	WP_011203619.1	IS1182-like element ISBf5 family transposase	90.6	30.0	43.3
MGA_1808	LOCUS_18070	sequence1:2050595..2051704(+)	frameshift		2050544	WP_000284571.1	IS1182-like element IS1182 family transposase	98.9	68.5	39.5
MGA_1819	LOCUS_18180	sequence1:2068331..2068651(-)	frameshift		2068628	WP_011861669.1	sensor domain-containing diguanylate cyclase	87.7	20.0	31.1
MGA_1825	LOCUS_18240	sequence1:2075497..2077059(+)	partial			WP_004080789.1	PEGA domain-containing protein	26.3	30.5	34.3
MGA_1844	LOCUS_18430	sequence1:2097115..2098566(+)	partial			WP_011393971.1	ATP-binding protein	50.1	48.1	41.3
MGA_1847	LOCUS_18460	sequence1:2100550..2101287(+)	partial			WP_000622462.1	DUF975 family protein	52.2	60.7	38.9
MGA_1848	LOCUS_18470	sequence1:2101291..2102313(+)	partial			WP_003229337.1	signal peptide peptidase SppA	66.2	69.3	41.6
MGA_1861	LOCUS_18600	sequence1:2110783..2112456(+)	partial			WP_010943149.1	EAL domain-containing protein	75.8	49.7	38.4
MGA_1865	LOCUS_18640	sequence1:2116770..2117174(+)	partial			WP_005810412.1	ferrous iron transport protein B	87.3	14.4	60.7
MGA_1880	LOCUS_18790	sequence1:2136011..2136373(-)	partial			WP_011015782.1	ATP-binding protein	91.7	25.3	61.8
MGA_1882	LOCUS_18810	sequence1:2136777..2137115(+)	partial			WP_003409202.1	IS66-like element ISPsy5 family transposase	86.6	18.8	39.2
MGA_1886	LOCUS_18850	sequence1:2138504..2139289(-)	partial			WP_011023383.1	class I SAM-dependent methyltransferase	44.8	50.6	31.0
MGA_1893	LOCUS_18920	sequence1:2144119..2144883(+)	partial			WP_010964396.1	carboxypeptidase regulatory-like domain-containing protein	72.4	10.4	35.1
MGA_1897	LOCUS_18960	sequence1:2147452..2148003(-)	partial			WP_002211251.1	flavodoxin	77.0	66.5	32.2
MGA_1903	LOCUS_19020	sequence1:2153488..2153979(-)	partial			WP_002211251.1	flavodoxin	91.4	67.4	41.4
MGA_1905	LOCUS_19040	sequence1:2155117..2155554(-)	partial			WP_026644807.1	AraC family transcriptional regulator	99.3	49.7	62.8
MGA_1907	LOCUS_19060	sequence1:2156347..2156754(-)	partial			WP_005811522.1	hypothetical protein	97.0	42.0	25.2
MGA_1908	LOCUS_19070	sequence1:2156965..2157417(-)	partial			WP_010966865.1	HD domain-containing protein	80.0	73.6	50.0
MGA_1924	LOCUS_19230	sequence1:2170759..2171370(-)	partial			WP_038968105.1	IS256 family transposase	72.9	35.1	48.6
MGA_1928	LOCUS_19270	sequence1:2173077..2173799(+)	frameshift		2172924	WP_106004846.1	IS3 family transposase	93.8	59.9	47.1
MGA_1933	LOCUS_19320	sequence1:2176295..2177425(-)	partial			WP_011068139.1	macro domain-containing protein	38.8	84.6	41.8
MGA_1956	LOCUS_19550	sequence1:2201636..2202703(-)	partial			WP_013096925.1	C40 family peptidase	62.8	80.9	30.0
MGA_1977	LOCUS_19760	sequence1:2227373..2228191(+)	partial			WP_002678868.1	FecR domain-containing protein	49.6	58.4	44.4
MGA_1991	LOCUS_19900	sequence1:2243445..2245352(-)	partial			WP_000796600.1	heavy metal translocating P-type ATPase	93.1	73.9	57.9
MGA_2004	LOCUS_20030	sequence1:2254827..2255075(-)	partial			WP_002673299.1	Fic family protein	96.3	22.7	62.0
MGA_2007	LOCUS_20060	sequence1:2256396..2256680(-)	partial			WP_150098959.1	IS256 family transposase	61.7	32.2	48.3
MGA_2008	LOCUS_20070	sequence1:2256677..2257096(-)	partial			WP_011727856.1	IS256 family transposase	86.3	28.2	40.3
MGA_2009	LOCUS_20080	sequence1:2257172..2257816(-)	partial			WP_011108152.1	PDDEXK nuclease domain-containing protein	77.6	41.1	41.7
MGA_2010	LOCUS_20090	sequence1:2257829..2259400(-)	partial			WP_011203325.1	hypothetical protein	30.6	42.6	33.5
MGA_2011	LOCUS_20100	sequence1:2259385..2261385(-)	partial			WP_012545530.1	site-specific DNA-methyltransferase	47.9	41.1	31.3
MGA_2016	LOCUS_20150	sequence1:2268920..2269243(-)	partial			WP_000885335.1	helix-turn-helix transcriptional regulator	57.9	84.7	43.5
MGA_2021	LOCUS_20190	sequence1:2271198..2271800(-)	partial			WP_011459611.1	flavin reductase	74.0	68.1	38.5
MGA_2025	LOCUS_20230	sequence1:2275393..2275719(+)	frameshift		2275289,2275322	WP_011107870.1	2-hydroxyacid dehydrogenase	99.1	32.1	61.7
MGA_2026	LOCUS_20240	sequence1:2275965..2277131(-)	partial			WP_002679905.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	71.1	65.4	31.5
MGA_2047	LOCUS_20450	sequence1:2303396..2303752(+)	partial			WP_013390104.1	DNA-deoxyinosine glycosylase	87.3	57.8	48.1
MGA_2054	LOCUS_20520	sequence1:2308867..2309091(+)	partial			WP_011460982.1	ATP-binding protein	94.6	18.1	52.8
MGA_2055	LOCUS_20530	sequence1:2309529..2310125(+)	partial			WP_009966633.1	bifunctional lytic transglycosylase/C40 family peptidase	67.7	35.9	37.3
MGA_2063	LOCUS_20610	sequence1:2318187..2319698(+)	partial			WP_000547409.1	ATP-dependent endonuclease	40.2	35.1	25.5
MGA_2069	LOCUS_20670	sequence1:2325339..2327282(-)	partial			WP_002680169.1	LysM peptidoglycan-binding domain-containing protein	18.5	32.5	41.7
MGA_2082	LOCUS_20800	sequence1:2338672..2339556(+)	partial			WP_010957277.1	M15 family metallopeptidase	88.1	64.9	41.2
MGA_2085	LOCUS_20830	sequence1:2342291..2344129(-)	partial			WP_010989452.1	class 1 internalin InlF	58.7	41.7	27.2
MGA_2093	LOCUS_20910	sequence1:2353589..2353936(-)	partial			WP_011948613.1	flavodoxin family protein	79.1	37.7	29.8
MGA_2097	LOCUS_20950	sequence1:2356328..2357017(-)	partial			WP_002901419.1	AraC family transcriptional regulator	43.7	31.8	30.0
MGA_2098	LOCUS_20960	sequence1:2357008..2358081(-)	partial			WP_000587069.1	HD domain-containing protein	36.1	38.5	34.8
MGA_2101	LOCUS_20990	sequence1:2359989..2362121(+)	partial			WP_164922188.1	ATP-binding protein	56.6	51.4	35.1
MGA_2118	LOCUS_21160	sequence1:2379504..2379734(+)	partial			WP_011108603.1	virulence RhuM family protein	88.2	19.2	56.7
MGA_2124	LOCUS_21220	sequence1:2384133..2384720(+)	partial			WP_011403856.1	restriction endonuclease subunit S	86.2	41.7	28.7
MGA_2144	LOCUS_21420	sequence1:2408152..2408526(+)	partial			WP_011203619.1	IS1182-like element ISBf5 family transposase	75.0	17.1	59.1
MGA_2147	LOCUS_21450	sequence1:2410774..2411007(-)	partial			WP_012256874.1	DNA methyltransferase	72.7	15.2	42.9
MGA_2150	LOCUS_21480	sequence1:2413436..2414623(-)	frameshift		2414630	WP_012583222.1	glycosyl hydrolase 53 family protein	100.0	62.4	40.3
MGA_2151	LOCUS_21490	sequence1:2414604..2415362(-)	frameshift		2414633	WP_012583222.1	glycosyl hydrolase 53 family protein	85.3	34.6	46.2
MGA_2153	LOCUS_21510	sequence1:2415981..2417027(-)	partial			WP_079653536.1	sigma 54-interacting transcriptional regulator	63.5	44.3	41.0
MGA_2163	LOCUS_21610	sequence1:2426591..2427100(-)	partial			WP_002680919.1	DUF192 domain-containing protein	62.7	60.9	53.8
MGA_2164	LOCUS_21620	sequence1:2427100..2427540(-)	partial			WP_002680920.1	hypothetical protein	97.9	70.4	49.7
MGA_2186	LOCUS_21840	sequence1:2455521..2456192(+)	partial			WP_011174522.1	SDR family oxidoreductase	78.0	73.2	29.5
MGA_2214	LOCUS_22120	sequence1:2487379..2487750(+)	partial			WP_002681887.1	hypothetical protein	100.0	46.3	53.0
MGA_2220	LOCUS_22180	sequence1:2489978..2490700(+)	frameshift		2489825	WP_106004846.1	IS3 family transposase	93.8	59.9	47.1
MGA_2228	LOCUS_22260	sequence1:2497216..2497617(+)	partial			WP_011202675.1	DEAD/DEAH box helicase family protein	91.7	7.5	48.8
MGA_2233	LOCUS_22310	sequence1:2506528..2506674(-)	partial			WP_011107170.1	ATP-binding protein	97.9	11.2	55.3
MGA_2250	LOCUS_22480	sequence1:2525639..2526631(+)	partial			WP_002667792.1	M23 family metallopeptidase	73.6	78.5	57.2
MGA_2266	LOCUS_22640	sequence1:2540381..2540614(-)	partial			WP_002672198.1	hypothetical protein	64.9	70.4	68.0
MGA_2267	LOCUS_22650	sequence1:2540618..2541064(-)	partial			WP_002682042.1	50S ribosomal protein L17	79.7	65.9	77.1
MGA_2297	LOCUS_22950	sequence1:2557334..2561815(-)	partial			WP_002354777.1	DNA-directed RNA polymerase subunit beta'	65.8	77.6	55.3
MGA_2309	LOCUS_23070	sequence1:2573510..2573881(+)	partial			WP_015709088.1	NusG domain II-containing protein	61.8	59.8	43.4
MGA_2339	LOCUS_23370	sequence1:2610086..2613028(-)	partial			WP_002681056.1	DNA translocase FtsK	67.0	73.5	56.1
MGA_2349	LOCUS_23470	sequence1:2624696..2627146(-)	partial			WP_011459570.1	ABC transporter substrate binding protein	51.5	43.0	40.6
MGA_2355	LOCUS_23530	sequence1:2631151..2631969(-)	partial			WP_011962350.1	leucine-rich repeat domain-containing protein	85.3	48.6	32.1
MGA_2357	LOCUS_23550	sequence1:2632851..2633267(+)	partial			WP_004152117.1	small heat shock protein sHSP20	83.3	57.7	32.5
MGA_2364	LOCUS_23620	sequence1:2639543..2641798(-)	partial			WP_003113139.1	patatin-like phospholipase PlpD	53.3	53.8	33.7
MGA_2376	LOCUS_23740	sequence1:2658454..2659341(+)	partial			WP_011107170.1	ATP-binding protein	87.5	61.8	48.3
MGA_2378	LOCUS_23760	sequence1:2660528..2661100(+)	partial			WP_011015782.1	ATP-binding protein	82.1	36.3	53.5
MGA_2381	LOCUS_23790	sequence1:2662624..2662770(-)	partial			WP_012257037.1	DNA adenine methylase	81.2	13.4	61.5
MGA_2404	LOCUS_24020	sequence1:2685003..2686895(+)	partial			WP_002682111.1	methyl-accepting chemotaxis protein	65.7	57.6	36.0
MGA_2408	LOCUS_24060	sequence1:2689803..2691146(-)	partial			WP_010886477.1	oligopeptide ABC transporter ATP-binding protein OppD	48.5	61.2	63.9
MGA_2409	LOCUS_24070	sequence1:2691139..2692665(-)	partial			WP_000829632.1	ABC transporter permease	44.7	62.4	40.5
MGA_2411	LOCUS_24090	sequence1:2693630..2695672(-)	partial			WP_010905295.1	peptide ABC transporter substrate-binding protein	70.0	76.9	22.4
MGA_2414	LOCUS_24120	sequence1:2698088..2698684(-)	partial			WP_003356907.1	TetR/AcrR family transcriptional regulator	77.3	74.5	25.6
MGA_2425	LOCUS_24230	sequence1:2715672..2717057(-)	partial			WP_002681061.1	methyl-accepting chemotaxis protein	57.7	40.7	29.6
MGA_2432	LOCUS_24300	sequence1:2727232..2728380(-)	partial			WP_011948169.1	ATP-dependent zinc metalloprotease FtsH	96.6	65.5	35.6