{ "type": "genome", "identifier": "GCF_016127555.1", "organism": "Streptococcus oralis", "title": "Streptococcus oralis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "US Food and Drug Administration", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016127555.1", "bioproject": "PRJNA224116", "biosample": "SAMN16357189", "wgs_master": "na", "refseq_category": "na", "taxid": "1303", "species_taxid": "1303", "organism_name": "Streptococcus oralis", "infraspecific_name": "strain=FDAARGOS_1020", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/12/20", "asm_name": "ASM1612755v1", "asm_submitter": "US Food and Drug Administration", "gbrs_paired_asm": "GCA_016127555.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/127/555/GCF_016127555.1_ASM1612755v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "1931547", "genome_size_ungapped": "1931547", "gc_percent": "41.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016127555.1-RS_2024_03_17", "annotation_date": "2024-03-17", "total_gene_count": "1870", "protein_coding_gene_count": "1779", "non_coding_gene_count": "75", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-12-20", "dateModified": "2020-12-20", "datePublished": "2020-12-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptococcus oralis" ], "sample_taxid": [ "1303" ], "sample_host_organism": [ "missing" ], "sample_host_organism_id": [], "sample_host_disease": [ "Unknown", "Unknown" ], "sample_host_disease_id": [], "sample_host_location": 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"ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptococcus oralis", "strain": "strain=NCTC11427", "accession": "GCA_900637025.1", "taxid": 1303, "species_taxid": 1303, "relation_to_type": "type", "validated": true, "ani": 99.9992, "matched_fragments": 640, "total_fragments": 643, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptococcus oralis", "strain": "strain=CCUG 13229", "accession": "GCA_002014885.1", "taxid": 1303, "species_taxid": 1303, "relation_to_type": "type", "validated": true, "ani": 99.9861, "matched_fragments": 631, "total_fragments": 643, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptococcus oralis", "strain": "strain=CCUG 24891", "accession": "GCA_001639375.1", "taxid": 1303, "species_taxid": 1303, "relation_to_type": "type", "validated": true, "ani": 99.9802, "matched_fragments": 626, "total_fragments": 643, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptococcus oralis", 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2819619, "species_taxid": 2819619, "relation_to_type": "type", "validated": true, "ani": 87.1569, "matched_fragments": 465, "total_fragments": 643, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus vulneris", "strain": "strain=DM3B3", "accession": "GCA_019218685.1", "taxid": 2853160, "species_taxid": 2853160, "relation_to_type": "type", "validated": true, "ani": 86.9394, "matched_fragments": 461, "total_fragments": 643, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus oriscaviae", "strain": "strain=HKU75", "accession": "GCA_018137985.1", "taxid": 2781599, "species_taxid": 2781599, "relation_to_type": "type", "validated": true, "ani": 79.23, "matched_fragments": 108, "total_fragments": 643, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus parasuis", "strain": "strain=SUT-286", "accession": "GCA_021654455.1", "taxid": 1501662, "species_taxid": 1501662, "relation_to_type": 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