{ "type": "genome", "identifier": "GCF_016135805.1", "organism": "Caulobacter hibisci", "title": "Caulobacter hibisci", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Beijing Academy of Agriculture and Forestry Science", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016135805.1", "bioproject": "PRJNA224116", "biosample": "SAMN16925194", "wgs_master": "JADWOX000000000.1", "refseq_category": "reference genome", "taxid": "2035993", "species_taxid": "2035993", "organism_name": "Caulobacter hibisci", "infraspecific_name": "strain=KACC 18849", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/12/21", "asm_name": "ASM1613580v1", "asm_submitter": "Beijing Academy of Agriculture and Forestry Science", "gbrs_paired_asm": "GCA_016135805.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/135/805/GCF_016135805.1_ASM1613580v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5565798", "genome_size_ungapped": "5565798", "gc_percent": "69.000000", "replicon_count": "0", "scaffold_count": "49", "contig_count": "49", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016135805.1-RS_2024_12_13", "annotation_date": "2024-12-13", "total_gene_count": "5218", "protein_coding_gene_count": "5086", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-12-21", "dateModified": "2020-12-21", "datePublished": "2020-12-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Caulobacter hibisci" ], "sample_taxid": [ "2035993" ], "sample_host_organism": [ "Hibiscus syriacus" ], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas guildfordensis", "strain": "strain=Sa3CVA3", "accession": "GCA_014836405.1", "taxid": 2762241, "species_taxid": 2762241, "relation_to_type": "type", "validated": true, "ani": 78.6689, "matched_fragments": 440, "total_fragments": 1833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovastum atsumiense", "strain": "strain=G2-11", "accession": "GCA_937425535.1", "taxid": 504468, "species_taxid": 504468, "relation_to_type": "type", "validated": true, "ani": 75.7602, "matched_fragments": 317, "total_fragments": 1833, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_016135805.1", "gtdb_species": "s__Caulobacter hibisci", "ani": 100.0, "matched_fragments": 1830, "total_fragments": 1833, "gtdb_taxonomy": 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