{ "type": "genome", "identifier": "GCF_016461745.1", "organism": "Rhodomicrobium vannielii ATCC 17100", "title": "Rhodomicrobium vannielii ATCC 17100", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Washington University in St. Louis", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016461745.1", "bioproject": "PRJNA224116", "biosample": "SAMN17079225", "wgs_master": "JAEMUJ000000000.1", "refseq_category": "na", "taxid": "648757", "species_taxid": "1069", "organism_name": "Rhodomicrobium vannielii ATCC 17100", "infraspecific_name": "strain=ATCC 17100", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/01/03", "asm_name": "ASM1646174v1", "asm_submitter": "Washington University in St. Louis", "gbrs_paired_asm": "GCA_016461745.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/461/745/GCF_016461745.1_ASM1646174v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3849085", "genome_size_ungapped": "3849085", "gc_percent": "62.000000", "replicon_count": "0", "scaffold_count": "177", "contig_count": "177", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016461745.1-RS_2024_05_07", "annotation_date": "2024-05-07", "total_gene_count": "3645", "protein_coding_gene_count": "3477", "non_coding_gene_count": "53", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-01-03", "dateModified": "2021-01-03", "datePublished": "2021-01-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhodomicrobium vannielii ATCC 17100" ], "sample_taxid": [ "648757" ], "sample_host_organism": [], 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"below_threshold" }, { "organism_name": "Lutibaculum baratangense", "strain": "strain=AMV1", "accession": "GCA_000496075.1", "taxid": 1358440, "species_taxid": 1358440, "relation_to_type": "type", "validated": true, "ani": 76.5896, "matched_fragments": 159, "total_fragments": 1216, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hyphomicrobium album", "strain": "strain=XQ2", "accession": "GCA_009708035.1", "taxid": 2665159, "species_taxid": 2665159, "relation_to_type": "type", "validated": true, "ani": 76.5849, "matched_fragments": 140, "total_fragments": 1216, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stappia albiluteola", "strain": "strain=F7233", "accession": "GCA_014050225.1", "taxid": 2758565, "species_taxid": 2758565, "relation_to_type": "type", "validated": true, "ani": 76.5523, "matched_fragments": 132, "total_fragments": 1216, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium 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"accession": "GCA_022179185.1", "taxid": 2038277, "species_taxid": 2038277, "relation_to_type": "type", "validated": true, "ani": 76.224, "matched_fragments": 157, "total_fragments": 1216, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methyloligella halotolerans", "strain": "strain=VKM B-2706", "accession": "GCA_001708935.1", "taxid": 1177755, "species_taxid": 1177755, "relation_to_type": "type", "validated": true, "ani": 76.2144, "matched_fragments": 114, "total_fragments": 1216, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium longum", "strain": "strain=DSM 23933", "accession": "GCA_022179385.1", "taxid": 767694, "species_taxid": 767694, "relation_to_type": "type", "validated": true, "ani": 75.964, "matched_fragments": 142, "total_fragments": 1216, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { 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