{ "type": "genome", "identifier": "GCF_016584115.1", "organism": "Ectothiorhodospira mobilis", "title": "Ectothiorhodospira mobilis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "GEOMAR Helmholtz Centre for Ocean Research Kiel", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016584115.1", "bioproject": "PRJNA224116", "biosample": "SAMN07535031", "wgs_master": "NRSK00000000.1", "refseq_category": "na", "taxid": "195064", "species_taxid": "195064", "organism_name": "Ectothiorhodospira mobilis", "infraspecific_name": "strain=DSM 237", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/01/08", "asm_name": "ASM1658411v1", "asm_submitter": "GEOMAR Helmholtz Centre for Ocean Research Kiel", "gbrs_paired_asm": "GCA_016584115.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/584/115/GCF_016584115.1_ASM1658411v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2796053", "genome_size_ungapped": "2796043", "gc_percent": "68.500000", "replicon_count": "0", "scaffold_count": "119", "contig_count": "119", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016584115.1-RS_2024_08_06", "annotation_date": "2024-08-06", "total_gene_count": "2682", "protein_coding_gene_count": "2579", "non_coding_gene_count": "52", "pubmed_id": "33375353" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-01-08", "dateModified": "2021-01-08", "datePublished": "2021-01-08", "_annotation": { "sample_count": 1, "sample_organism": [ "Ectothiorhodospira mobilis" ], "sample_taxid": [ "195064" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Ecuador: Galapagos Islands, near Santa Cruz Island" ], "sample_host_location_id": [], "data_size": "0.763 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2796053", "Number of Sequences": "119", "Longest Sequences (bp)": "231384", "N50 (bp)": "77281", "Gap Ratio (%)": "0.000358", "GCcontent (%)": "68.3", "Number of CDSs": "2547", "Average Protein Length": "326.2", "Coding Ratio (%)": "89.1", "Number of rRNAs": "3", "Number of tRNAs": "50", "Number of CRISPRs": "3" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Thioalkalivibrio sulfidiphilus", "strain": "strain=HL-EbGR7", "accession": 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