{ "type": "genome", "identifier": "GCF_016632335.1", "organism": "Noviherbaspirillum pedocola", "title": "Noviherbaspirillum pedocola", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Korea University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016632335.1", "bioproject": "PRJNA224116", "biosample": "SAMN17225430", "wgs_master": "JAEPBG000000000.1", "refseq_category": "reference genome", "taxid": "2801341", "species_taxid": "2801341", "organism_name": "Noviherbaspirillum pedocola", "infraspecific_name": "strain=DKR-6", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/01/13", "asm_name": "ASM1663233v1", "asm_submitter": "Korea University", "gbrs_paired_asm": "GCA_016632335.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/632/335/GCF_016632335.1_ASM1663233v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7239946", "genome_size_ungapped": "7239752", "gc_percent": "61.500000", "replicon_count": "0", "scaffold_count": "80", "contig_count": "80", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016632335.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "6627", "protein_coding_gene_count": "6412", "non_coding_gene_count": "65", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-01-13", "dateModified": "2021-01-13", "datePublished": "2021-01-13", "_annotation": { "sample_count": 1, "sample_organism": [ "Noviherbaspirillum pedocola" ], "sample_taxid": [ "2801341" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South 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"organism_name": "Herbaspirillum robiniae", "strain": "strain=HZ10", "accession": "GCA_002213415.1", "taxid": 2014887, "species_taxid": 2014887, "relation_to_type": "type", "validated": true, "ani": 79.6478, "matched_fragments": 595, "total_fragments": 2372, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oxalicibacterium flavum", "strain": "strain=CCM 7086", "accession": "GCA_014635065.1", "taxid": 179467, "species_taxid": 179467, "relation_to_type": "type", "validated": true, "ani": 79.575, "matched_fragments": 450, "total_fragments": 2372, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum malthae", "strain": "strain=CC-AFH3", "accession": "GCA_015352985.1", "taxid": 1260987, "species_taxid": 1260987, "relation_to_type": "type", "validated": true, "ani": 79.5452, "matched_fragments": 683, "total_fragments": 2372, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbaspirillum chlorophenolicum", "strain": "strain=CPW301", "accession": "GCA_001189955.1", "taxid": 211589, "species_taxid": 211589, "relation_to_type": "type", "validated": true, "ani": 79.4118, "matched_fragments": 482, "total_fragments": 2372, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbaspirillum chlorophenolicum", "strain": "strain=NBRC 102525", "accession": "GCA_001571165.1", "taxid": 211589, "species_taxid": 211589, "relation_to_type": "type", "validated": true, "ani": 79.3452, "matched_fragments": 483, "total_fragments": 2372, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oxalicibacterium solurbis", "strain": "strain=CCM 7664", "accession": "GCA_014635845.1", "taxid": 69280, "species_taxid": 69280, "relation_to_type": "type", "validated": true, "ani": 79.3215, "matched_fragments": 405, "total_fragments": 2372, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbaspirillum camelliae", "strain": "strain=WT00C", "accession": 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"ani": 79.059, "matched_fragments": 506, "total_fragments": 2372, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbaspirillum hiltneri", "strain": "strain=N3", "accession": "GCA_001267925.1", "taxid": 341045, "species_taxid": 341045, "relation_to_type": "type", "validated": true, "ani": 79.0311, "matched_fragments": 481, "total_fragments": 2372, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia niastensis", "strain": "strain=DSM 21313", "accession": "GCA_000382345.1", "taxid": 544911, "species_taxid": 544911, "relation_to_type": "type", "validated": true, "ani": 79.0119, "matched_fragments": 595, "total_fragments": 2372, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia terrae", "strain": "strain=JCM 31606", "accession": "GCA_024753145.1", "taxid": 1811224, "species_taxid": 1811224, "relation_to_type": "type", "validated": true, "ani": 78.9837, "matched_fragments": 560, "total_fragments": 2372, 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